prot_F-serratus_M_contig98.21089.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig98.21089.1
Unique Nameprot_F-serratus_M_contig98.21089.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length519
Homology
BLAST of mRNA_F-serratus_M_contig98.21089.1 vs. uniprot
Match: A0A2P5DE07_PARAD (Glycolate oxidase subunit n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5DE07_PARAD)

HSP 1 Score: 496 bits (1278), Expect = 2.910e-168
Identity = 252/490 (51.43%), Postives = 342/490 (69.80%), Query Frame = 0
Query:   29 SYASVNSADLDAFRSFVGADNVKTSSDELEMYNVDWMKQYRGASPVAVLPKTTEQVSRVLHHCNERCLPIVPQGGNTGLVGGSTPTGGEVVLSTSRMNSIVSFDPLANVIVCESGCILETLDTFLADRGCIMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSILGVEVVLADGTILDLLSSNRKDNTGYALKHLFVGAEGTLGVVTRCSIAVPPRPANVTVALLALPDFSAVQRVLSLARGRLAEVLSAVEFMDKETVELTLDKCRGVRSPFPSVDGSNCGGHAFYVLIETSGSDATHDGEKLERFLEIGMESGTIVDGAVAQDMSQVNSMWSLREHAPLAVSLAGYLYKYDVSLPVGDFLALADETRRRLRGLCSPEPIVVAFGHLGDGNLHLNVSVPEAEEDGGAKGEAGGSGNAKVFAALEPFVFEWVVSRGGSISAEHGVGQHKRNLLSMQRPEPVLGVMRGIKNMLDPRGIMNPFKVLPEA 518
            S++ +NS D++ F+  +G  NV    D L   N DWM +YRG+S + +LP++TE+VS++L++CN R L +VPQGGNTGLVGGS P   EV+++   MNSI+SFD ++ ++VCE+GCILE L TFL  +G +MPLDLGAKGSCQIGGN+STNAGGLRL+RYGSLHG+ILG+E VLA+G +LD+L + RKDNTGY LKHLF+G+EG+LG+VT+ SI  PP+ ++V +A LA  D+ + Q++L  A+ +L E+LSA EF+D   ++L L+   GVR+P P         H FYVLIET+GS+ + D EKLE FL   ME G I DGA++QD++Q +S W LRE  P A+  +G +YKYD+S+PV     L +E R RL         VVA+GHLGDGNLHLN+S P+ +E              K+ A +EPFV+EW   R GSISAEHG+G  K N +   + +  + +M  IK +LDP GI+NP+KVLP +
Sbjct:   98 SFSMLNSDDINYFKGILGDKNVIQDEDRLLTSNTDWMNKYRGSSKLLLLPRSTEEVSQILNYCNSRSLAVVPQGGNTGLVGGSVPVYDEVIINVGLMNSIISFDKVSGILVCEAGCILENLITFLDTQGFVMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNILGIEAVLANGDVLDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTPPKLSSVNLAFLACKDYFSCQKLLVEAKRKLGEILSAFEFLDNVAMDLALNHLEGVRNPLPPSL------HNFYVLIETTGSNESSDKEKLEAFLLQAMEVGLISDGALSQDINQASSFWRLREGLPEALQKSGAVYKYDLSIPVEKMYDLVEEMRARLGAPTK----VVAYGHLGDGNLHLNISAPQYDE--------------KILAQIEPFVYEWTSKRRGSISAEHGLGLMKANEIFYSKSKNTVQLMGSIKKLLDPNGILNPYKVLPHS 563          
BLAST of mRNA_F-serratus_M_contig98.21089.1 vs. uniprot
Match: A0A485L1G6_9STRA (Aste57867_13886 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1G6_9STRA)

HSP 1 Score: 494 bits (1271), Expect = 3.180e-168
Identity = 253/506 (50.00%), Postives = 346/506 (68.38%), Query Frame = 0
Query:   13 SPLRSVALLEPKRTAHSYASVNSADLDAFRSFVGADNVKTSSDELEMYNVDWMKQYRGASPVAVLPKTTEQVSRVLHHCNERCLPIVPQGGNTGLVGGSTPTGGEVVLSTSRMNSIVSFDPLANVIVCESGCILETLDTFLADRGCIMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSILGVEVVLADGTILDLLSSNRKDNTGYALKHLFVGAEGTLGVVTRCSIAVPPRPANVTVALLALPDFSAVQRVLSLARGRLAEVLSAVEFMDKETVELTLDKCRGVRSPFPSVDGSNCGGHAFYVLIETSGSDATHDGEKLERFLEIGMESGTIVDGAVAQDMSQVNSMWSLREHAPLAVSLAGYLYKYDVSLPVGDFLALADETRRRLRGLCSPEPIVVAFGHLGDGNLHLNVSVPEAEEDGGAKGEAGGSGNAKVFAALEPFVFEWVVSRGGSISAEHGVGQHKRNLLSMQRPEPVLGVMRGIKNMLDPRGIMNPFKVLPEA 518
            +PLR +          ++A++N AD+  F+       V T++DE+  +N DW+ +Y G S + + PKTT++VS +L +CN+R L +VPQGGNTGLVGGS P   E+VLST  MN I SFD ++ ++VC++GCILETLD  +   G +MPLDLGAKG+CQIGGN STNAGGLRLLRYGSLHGSILG+E VLADGTI+D LS+ RKDNTGY LK LF+G+EGTLGV+TR S+  PPR + V VAL+    F AV++    AR  L E+LSAVEFMD+ ++++ L +   +  P  S    NC    FYVLIET+GS+A+HD EKLE +L   M++G++VDG VAQD +Q   ++ +RE   LA+S  GY+YKYDVS+P+ ++  +  +TR R+        +VV +GHLGD N+HLN+S  E ++              KV A LEPFVFEW  +R GSISAEHG+G HK + L + + +  + +M+ +K++ DP GI+NP+KVLP +
Sbjct:   11 APLRRLFSSHGDIKRGAFATLNDADVAHFQKICSG--VLTATDEVAPFNSDWLNKYHGHSKLVLRPKTTQEVSDILKYCNDRRLAVVPQGGNTGLVGGSVPVHDEIVLSTGNMNQIESFDDVSGIVVCQAGCILETLDAHVGKFGYMMPLDLGAKGTCQIGGNASTNAGGLRLLRYGSLHGSILGIEAVLADGTIVDCLSTMRKDNTGYDLKQLFIGSEGTLGVITRLSVLTPPRSSAVNVALVGCESFDAVKKTYVQARRHLGEILSAVEFMDRGSLDMVLSQQPDLADPLES----NC---PFYVLIETAGSNASHDMEKLEHYLADVMDTGSVVDGTVAQDAAQAKRLFGIREDITLALSSRGYVYKYDVSIPIDEYYQIVQDTRTRME---KHGAVVVGYGHLGDSNMHLNISTLEYDD--------------KVMADLEPFVFEWTAARRGSISAEHGIGTHKPSFLHLSKSDSAIRMMQQMKHVFDPNGILNPYKVLPSS 490          
BLAST of mRNA_F-serratus_M_contig98.21089.1 vs. uniprot
Match: A0A0K9S1Y5_SPIOL (FAD-binding PCMH-type domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9S1Y5_SPIOL)

HSP 1 Score: 496 bits (1278), Expect = 3.540e-168
Identity = 250/497 (50.30%), Postives = 343/497 (69.01%), Query Frame = 0
Query:   23 PKRTAHSYASVNSADLDAFRSFVGADNVKTSSDELEMYNVDWMKQYRGASPVAVLPKTTEQVSRVLHHCNERCLPIVPQGGNTGLVGGSTPTGGEVVLSTSRMNSIVSFDPLANVIVCESGCILETLDTFLADRGCIMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSILGVEVVLADGTILDLLSSNRKDNTGYALKHLFVGAEGTLGVVTRCSIAVPPRPANVTVALLALPDFSAVQRVLSLARGRLAEVLSAVEFMDKETVELTLDKCRGVRSPFPSVDGSNCGGHAFYVLIETSGSDATHDGEKLERFLEIGMESGTIVDGAVAQDMSQVNSMWSLREHAPLAVSLAGYLYKYDVSLPVGDFLALADETRRRLRGLCSPEPI-VVAFGHLGDGNLHLNVSVPEAEEDGGAKGEAGGSGNAKVFAALEPFVFEWVVSRGGSISAEHGVGQHKRNLLSMQRPEPVLGVMRGIKNMLDPRGIMNPFKVLPEA 518
            P     S++ +NS D+  F+S +G +NV    D L+  N DWM +Y+G+S + +LP++TE+VS ++ +CN R L IVPQGGNTGLVGGS P   EV+++ S+MN I+SFD ++ ++VCE+GCILE L+++  + G +MPLDLGAKGSCQIGGN+STNAGGLRL+RYGSLHG++LG+E VLADGT++D+L + RKDNTGY LKHLF+G+EG+LG+VT+ S+  PP+ +   VA LA  D+ + Q++L  AR +L EVLSA EF+D   + + L+   GVR+P P         H FYVLIET+GSD ++D EKLE FL   MESG I+DG VAQD++QV+S W +RE  P A+  +G +YKYD+SLP+     L DE R RL       P+ VV +GHLGD NLHLN++ P+ ++D              + A +EPFV+EW     GSISAEHG+G  K N +   +    + +M  IK M+DP GI+NP+KVLP +
Sbjct:   96 PVERIPSFSEMNSKDIGYFKSILGENNVIQDQDRLQPANTDWMHKYQGSSKLMLLPRSTEEVSHIMRYCNSRHLAIVPQGGNTGLVGGSVPVFDEVIVNMSQMNKIISFDKVSGILVCEAGCILENLESYTDNEGFVMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGIEAVLADGTVMDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSLLTPPKLSATNVAFLACNDYLSCQKLLIEARRKLGEVLSAFEFLDSYAMNVVLNNLEGVRNPLPPAV------HNFYVLIETTGSDESYDREKLETFLFRLMESGLILDGVVAQDINQVSSFWRIREGIPEALMKSGAVYKYDLSLPLEKMYDLVDEMRARLG-----HPVKVVGYGHLGDSNLHLNITSPKYDDD--------------ILAQIEPFVYEWTSKHRGSISAEHGIGLMKANKIYYSKSPEAVQLMVSIKKMMDPNGILNPYKVLPHS 567          
BLAST of mRNA_F-serratus_M_contig98.21089.1 vs. uniprot
Match: A0A3M6VLW6_9STRA (FAD-binding PCMH-type domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VLW6_9STRA)

HSP 1 Score: 494 bits (1271), Expect = 3.640e-168
Identity = 250/491 (50.92%), Postives = 343/491 (69.86%), Query Frame = 0
Query:   30 YASVNSADLDAFRSFVGADNVKTSSDELEMYNVDWMKQYRGAS--PVAVLPKTTEQVSRVLHHCNERCLPIVPQGGNTGLVGGSTPTGGEVVLSTSRMNSIVSFDPLANVIVCESGCILETLDTFLADRGCIMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSILGVEVVLADGTILDLLSSNRKDNTGYALKHLFVGAEGTLGVVTRCSIAVPPRPANVTVALLALPDFSAVQRVLSLARGRLAEVLSAVEFMDKETVELTLDKCRGVRSPFPSVDGSNCGGHAFYVLIETSGSDATHDGEKLERFLEIGMESGTIVDGAVAQDMSQVNSMWSLREHAPLAVSLAGYLYKYDVSLPVGDFLALADETRRRLRGLCSPEPIVVAFGHLGDGNLHLNVSVPEAEEDGGAKGEAGGSGNAKVFAALEPFVFEWVVSRGGSISAEHGVGQHKRNLLSMQRPEPVLGVMRGIKNMLDPRGIMNPFKVLPEA 518
            + S N  D   F+  +  ++V T +D+ E + VDW+K+Y+  S   + + PKTTEQV+ +L +CNER LP+VPQGGNTGLVGGS P   E+VLST+ MN+++SFD ++ ++VCE+GCILE LD ++A  G +MPLDLGAKG+CQIGGN++TNAGGLRLLRYGSLHG++LG+E VLADGT++D LS+ RKDNTGY LK LF+G+EGTLGVVT+ SI  PPR  +  VALLA  DF +VQ+    A+  L EVLSAVEFMD++++++ L +    + P  +          +YVLIETSGS++ HD EKL  +LE  M SG +VDG VAQD +Q   ++ +RE   +A+S  GY++KYD+SLP+  +  +A+ETR RL    + +  VV +GH+GD N+HLNVS  E +++              VF ALEPF+FEW     GSISAEHG+G+HK   L M +    + +M+ +K M+DP+GI+NP+KVLPE 
Sbjct:   33 FTSWNDEDKTYFQQLLKPESVLTDTDDTEAFTVDWLKKYKANSNHQMVLKPKTTEQVAAILTYCNERNLPVVPQGGNTGLVGGSVPVFDEIVLSTNSMNNVISFDEVSGILVCEAGCILENLDNYVAKYGYMMPLDLGAKGTCQIGGNVATNAGGLRLLRYGSLHGTVLGIEAVLADGTVIDCLSTMRKDNTGYDLKQLFIGSEGTLGVVTKVSILTPPRSLSKNVALLACEDFVSVQKAFVEAKKHLGEVLSAVEFMDRQSLDMVLSQQDWTKDPLETPS-------PYYVLIETSGSNSDHDMEKLNEYLEDVMGSGVVVDGTVAQDEAQARKLFLIREDITVALSARGYVHKYDISLPIEQYYKIAEETRERL---VTTDAKVVCYGHIGDCNVHLNVSTLEYDDE--------------VFHALEPFIFEWTSKYRGSISAEHGIGRHKPEYLHMSKSGNAIKLMQQMKKMMDPKGILNPYKVLPET 499          
BLAST of mRNA_F-serratus_M_contig98.21089.1 vs. uniprot
Match: A0A4P1QTJ1_LUPAN (FAD-binding PCMH-type domain-containing protein n=3 Tax=Lupinus TaxID=3869 RepID=A0A4P1QTJ1_LUPAN)

HSP 1 Score: 496 bits (1278), Expect = 3.660e-168
Identity = 251/489 (51.33%), Postives = 339/489 (69.33%), Query Frame = 0
Query:   30 YASVNSADLDAFRSFVGADNVKTSSDELEMYNVDWMKQYRGASPVAVLPKTTEQVSRVLHHCNERCLPIVPQGGNTGLVGGSTPTGGEVVLSTSRMNSIVSFDPLANVIVCESGCILETLDTFLADRGCIMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSILGVEVVLADGTILDLLSSNRKDNTGYALKHLFVGAEGTLGVVTRCSIAVPPRPANVTVALLALPDFSAVQRVLSLARGRLAEVLSAVEFMDKETVELTLDKCRGVRSPFPSVDGSNCGGHAFYVLIETSGSDATHDGEKLERFLEIGMESGTIVDGAVAQDMSQVNSMWSLREHAPLAVSLAGYLYKYDVSLPVGDFLALADETRRRLRGLCSPEPIVVAFGHLGDGNLHLNVSVPEAEEDGGAKGEAGGSGNAKVFAALEPFVFEWVVSRGGSISAEHGVGQHKRNLLSMQRPEPVLGVMRGIKNMLDPRGIMNPFKVLPEA 518
            ++ +N  D+  F   +GA NV    ++L   N DWM +Y+G+S + + P+TTEQVS++L +CN RCL +VPQGGNTGLVGGS P   EV++S S MN+I+SFD ++ ++VCE+GCILE + +FL + G IMPLDLGAKGSCQIGGN+STNAGGLRL+RYGSLHGS+LG+E VLA+GT+LD+L + RKDNTGY LKHLF+G+EG+LG+VT+ SI  PP+ A+V VA LA  D+S+ Q++L  A+ +L E+LSA EF+D +++ L L+   G R+P PS        + FYVLIET+GSD + D +KLE FL   ME+  I DG +AQD++Q +S W LRE  P A+  AG +YKYD+S+PV +   L DE R RL    +    VV +GHLGDGNLHLN+S  + ++              K+ + +EPFV+EW     GSISAEHG+G  K N +        + VM  IKN+LDP  I+NP+KVLP +
Sbjct:  106 FSKLNDEDVRYFEEILGAKNVIQDDEKLIAANTDWMHKYKGSSKLLLQPRTTEQVSQILKYCNSRCLAVVPQGGNTGLVGGSVPVFDEVIVSLSSMNNIISFDKVSGILVCEAGCILENIISFLDNEGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGSVLGIEAVLANGTVLDMLKTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTPPKLASVNVAFLACKDYSSCQKLLQEAKRKLGEILSAFEFLDSQSMNLVLNHLEGARNPLPSSQ------YNFYVLIETTGSDESSDKQKLEAFLLGSMENELISDGVLAQDINQASSFWLLREGIPEALMRAGAVYKYDLSIPVENLYNLVDEMRTRLGNAAN----VVGYGHLGDGNLHLNISTSKYDD--------------KILSQIEPFVYEWTSKHHGSISAEHGLGLMKANKIFYSNSSDTVQVMVSIKNLLDPNHILNPYKVLPHS 570          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig98.21089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P5DE07_PARAD2.910e-16851.43Glycolate oxidase subunit n=2 Tax=Cannabaceae TaxI... [more]
A0A485L1G6_9STRA3.180e-16850.00Aste57867_13886 protein n=1 Tax=Aphanomyces stella... [more]
A0A0K9S1Y5_SPIOL3.540e-16850.30FAD-binding PCMH-type domain-containing protein n=... [more]
A0A3M6VLW6_9STRA3.640e-16850.92FAD-binding PCMH-type domain-containing protein n=... [more]
A0A4P1QTJ1_LUPAN3.660e-16851.33FAD-binding PCMH-type domain-containing protein n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016167FAD-binding, type PCMH, subdomain 1GENE3D3.30.43.10coord: 24..124
e-value: 2.4E-31
score: 109.6
IPR006094FAD linked oxidase, N-terminalPFAMPF01565FAD_binding_4coord: 74..210
e-value: 5.2E-34
score: 116.9
IPR016171Vanillyl-alcohol oxidase, C-terminal subdomain 2GENE3D1.10.45.10coord: 475..515
e-value: 1.9E-12
score: 48.9
IPR004113FAD-linked oxidase, C-terminalPFAMPF02913FAD-oxidase_Ccoord: 248..514
e-value: 4.7E-48
score: 164.0
IPR016169FAD-binding, type PCMH, subdomain 2GENE3D3.30.465.10coord: 126..247
e-value: 7.7E-40
score: 137.6
NoneNo IPR availableGENE3D3.30.70.2740coord: 378..474
e-value: 1.7E-18
score: 68.5
NoneNo IPR availableGENE3D3.30.70.2190coord: 248..375
e-value: 1.2E-29
score: 105.2
NoneNo IPR availablePANTHERPTHR43716:SF1D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIALcoord: 27..517
NoneNo IPR availablePANTHERPTHR43716FAMILY NOT NAMEDcoord: 27..517
IPR016166FAD-binding domain, PCMH-typePROSITEPS51387FAD_PCMHcoord: 68..247
score: 24.413
IPR036318FAD-binding, type PCMH-like superfamilySUPERFAMILY56176FAD-binding/transporter-associated domain-likecoord: 36..248
IPR016164FAD-linked oxidase-like, C-terminalSUPERFAMILY55103FAD-linked oxidases, C-terminal domaincoord: 251..516

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig98contigF-serratus_M_contig98:175028..180870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig98.21089.1mRNA_F-serratus_M_contig98.21089.1Fucus serratus malemRNAF-serratus_M_contig98 171711..180966 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig98.21089.1 ID=prot_F-serratus_M_contig98.21089.1|Name=mRNA_F-serratus_M_contig98.21089.1|organism=Fucus serratus male|type=polypeptide|length=519bp
MVIKYFIGRGWLSPLRSVALLEPKRTAHSYASVNSADLDAFRSFVGADNV
KTSSDELEMYNVDWMKQYRGASPVAVLPKTTEQVSRVLHHCNERCLPIVP
QGGNTGLVGGSTPTGGEVVLSTSRMNSIVSFDPLANVIVCESGCILETLD
TFLADRGCIMPLDLGAKGSCQIGGNISTNAGGLRLLRYGSLHGSILGVEV
VLADGTILDLLSSNRKDNTGYALKHLFVGAEGTLGVVTRCSIAVPPRPAN
VTVALLALPDFSAVQRVLSLARGRLAEVLSAVEFMDKETVELTLDKCRGV
RSPFPSVDGSNCGGHAFYVLIETSGSDATHDGEKLERFLEIGMESGTIVD
GAVAQDMSQVNSMWSLREHAPLAVSLAGYLYKYDVSLPVGDFLALADETR
RRLRGLCSPEPIVVAFGHLGDGNLHLNVSVPEAEEDGGAKGEAGGSGNAK
VFAALEPFVFEWVVSRGGSISAEHGVGQHKRNLLSMQRPEPVLGVMRGIK
NMLDPRGIMNPFKVLPEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016167FAD-bd_PCMH_sub1
IPR006094Oxid_FAD_bind_N
IPR016171Vanillyl_alc_oxidase_C-sub2
IPR004113FAD-linked_oxidase_C
IPR016169FAD-bd_PCMH_sub2
IPR016166FAD-bd_PCMH
IPR036318FAD-bd_PCMH-like_sf
IPR016164FAD-linked_Oxase-like_C