prot_F-serratus_M_contig978.21073.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig978.21073.1
Unique Nameprot_F-serratus_M_contig978.21073.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length168
Homology
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BLAST of mRNA_F-serratus_M_contig978.21073.1 vs. uniprot
Match: A0A6H5JEP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP0_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.560e-25
Identity = 53/89 (59.55%), Postives = 70/89 (78.65%), Query Frame = 0 
Query:   33 TSTPSSSTEICLLESATCYDASLCWDCVAQFV-DAAD-CAEQYPVLADDGASECEVGAAMLCCSFDASVEDCLGDAVTMDYFQCSLDES 119
            TS PSSS+E C+ E+A CYD++LCWDCVAQF  D  D C E+YP +++ GAS+C+V +A+ CCSF  S +DCL DAVTM++FQC L+ES
Sbjct:   38 TSLPSSSSEACVEEAAACYDSALCWDCVAQFAEDGVDSCGERYPAMSNSGASDCDVASALFCCSFYVSGQDCLDDAVTMEFFQCGLEES 126
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig978.21073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JEP0_9PHAE2.560e-2559.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..166
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.469

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig978contigF-serratus_M_contig978:180430..181095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig978.21073.1mRNA_F-serratus_M_contig978.21073.1Fucus serratus malemRNAF-serratus_M_contig978 180419..181156 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig978.21073.1 ID=prot_F-serratus_M_contig978.21073.1|Name=mRNA_F-serratus_M_contig978.21073.1|organism=Fucus serratus male|type=polypeptide|length=168bp
MGINRITSFLVTTGAVLLTTTPYCAVRRASATTSTPSSSTEICLLESATC
YDASLCWDCVAQFVDAADCAEQYPVLADDGASECEVGAAMLCCSFDASVE
DCLGDAVTMDYFQCSLDESDCSSSDSPCSGTAPINGVARAPTRAESPGRL
RVLLACTILCLLHFYYL*
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