prot_F-serratus_M_contig972.21054.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig972.21054.1
Unique Nameprot_F-serratus_M_contig972.21054.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length332
Homology
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: M1V6V7_CYAM1 (Similar to small multidrug export protein qacE n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V6V7_CYAM1)

HSP 1 Score: 166 bits (421), Expect = 3.740e-46
Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 0
Query:  158 HIGQKIAQFFRRGG-LPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNR-AREKSEEFGDAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVLAG 323
            H+G +IA + RR   LPDWATLM +SA+PVVELRGGVPVG+W+GL   + F  CV+GNM+PIP ++F L+   +R++A+P+L+  AR          SQALAL LFVG+PLPGTGAW+GA+ A LL+M    A++SI  GV  AG IM  L L GR G L+    L G
Sbjct:   77 HLGHRIAFWLRRETRLPDWATLMLVSALPVVELRGGVPVGLWLGLSPAETFLFCVIGNMLPIPFLVFGLRHERMRRLARPLLDSVARRLPSHANTPSSQALALALFVGVPLPGTGAWSGAIAAFLLQMDIWLALVSIAAGVAIAGCIMIALVLMGRIGGLIVAFALLG 244          
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: B7G0N6_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0N6_PHATC)

HSP 1 Score: 159 bits (403), Expect = 4.420e-45
Identity = 84/138 (60.87%), Postives = 103/138 (74.64%), Query Frame = 0
Query:  178 LMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFG--DAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTG 313
            L  ISA+PVVELRG VPVGIWMGLPI  V  +CV+GNMIPI  +LF+L++  ++ +  P+LNRA +K+ E G    + Q  +L  FVGIPLPGTGAWTGAMGA LL MP   A+ SIF GVVSAGVIMS +TL+G+ G
Sbjct:    2 LAIISALPVVELRGAVPVGIWMGLPIATVLPICVLGNMIPIVPLLFLLRNERLKSLMSPILNRAAKKTSELGIGSVEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMPTPVALSSIFAGVVSAGVIMSAITLAGKKG 139          
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: B8BZQ1_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZQ1_THAPS)

HSP 1 Score: 159 bits (401), Expect = 1.130e-44
Identity = 83/146 (56.85%), Postives = 106/146 (72.60%), Query Frame = 0
Query:  178 LMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFG--DAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVL 321
            L  ISA+PVVELRG VPVG+WMGLPITKV  +CV+GNM PI  +LF+L++  ++ +  P+L+RA +KS   G    + Q  +L  FVGIPLPGTGAWTGAMGA LL MP   A+ SIF GVV+AG+IMS +TL+G+ G + A   L
Sbjct:    2 LAIISALPVVELRGAVPVGVWMGLPITKVLPVCVLGNMAPIVPLLFLLRNDKLKNLMSPILSRAEKKSASLGVGSIEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMPTAVALSSIFTGVVAAGIIMSSITLAGKKGGIAALVAL 147          
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A8J6C2J5_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C2J5_DIALT)

HSP 1 Score: 163 bits (412), Expect = 1.600e-44
Identity = 89/175 (50.86%), Postives = 113/175 (64.57%), Query Frame = 0
Query:  157 LHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFGDAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVLAGFCLSNINK 331
            LHIGQK+A      GLPD   L  IS +PVVELRG VPVG W+G+   +   +CV+GN   +  +L  L+ P V ++  PVL++AR K     DA+S  L L +FVG+PLPGTG WTGAM A LL MPF  A  SI  GV+ AG+IM+ LTL+G  GAL+A+ VLA FC   + K
Sbjct:  108 LHIGQKLALKLGSSGLPDELVLALISMLPVVELRGAVPVGSWLGVSPLRTLIVCVLGNTFAVVCLLGALRLPAVERLLAPVLDKARSKMGALADAKSLPLGLAVFVGVPLPGTGGWTGAMIAHLLGMPFGLACASISAGVLMAGLIMTALTLAGWYGALVASGVLAIFCAGTLLK 282          
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A7S3UXV0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXV0_HETAK)

HSP 1 Score: 152 bits (383), Expect = 5.040e-41
Identity = 84/162 (51.85%), Postives = 108/162 (66.67%), Query Frame = 0
Query:  146 ALVVAEGAEKPLHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFGDAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLT 307
            A+  AEG  + LH+G KIA   R  GL D   +M ISA+P VELRG +PVG W+GLP  K FAL V GNM PI  +L +LKS    ++  P+L RA+EKS+  G    + LAL  FVGIPLPGTGAWTGA  + LL+M F+ + ++I  GV++AG I+S LT
Sbjct:   28 AMAAAEG--EKLHLGHKIANALRSKGLTDEMIVMLISAIPAVELRGSIPVGAWLGLPAAKTFALAVAGNMAPIVVLLALLKSQKFVQLMDPLLRRAKEKSKGLGSEGQKELALATFVGIPLPGTGAWTGAFVSLLLDMGFRASTVTITAGVMAAGAIVSVLT 187          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M1V6V7_CYAM13.740e-4652.98Similar to small multidrug export protein qacE n=1... [more]
B7G0N6_PHATC4.420e-4560.87Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]
B8BZQ1_THAPS1.130e-4456.85Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A8J6C2J5_DIALT1.600e-4450.86Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S3UXV0_HETAK5.040e-4151.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009577Putative small multi-drug exportPFAMPF06695Sm_multidrug_excoord: 188..302
e-value: 7.0E-34
score: 117.1
IPR009577Putative small multi-drug exportPANTHERPTHR36007FAMILY NOT NAMEDcoord: 46..321
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 206..225
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 313..329
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 288..306
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 307..312
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 330..331
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 277..287
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 201..205
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..276
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 134..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 226..254
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.733
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
NoneNo IPR availableTMHMMTMhelixcoord: 288..310
NoneNo IPR availableTMHMMTMhelixcoord: 256..278
NoneNo IPR availableTMHMMTMhelixcoord: 203..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig972contigF-serratus_M_contig972:154155..156924 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig972.21054.1mRNA_F-serratus_M_contig972.21054.1Fucus serratus malemRNAF-serratus_M_contig972 154071..157794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig972.21054.1 ID=prot_F-serratus_M_contig972.21054.1|Name=mRNA_F-serratus_M_contig972.21054.1|organism=Fucus serratus male|type=polypeptide|length=332bp
MMARNLLTCAIVAVIQLVSVVPSTAFLISPYPTTPHAYVGRATKHARRSF
SVSPSQPLRSSSRKKENLAIYPASYHSLPHQPPSDGPTSSCASAGLSTLS
LERSKRDQLPRLSGRFAAICASALALGFAVTVLGSSSACAAAKAGALVVA
EGAEKPLHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMG
LPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFGD
AQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAG
VIMSCLTLSGRTGALLATAVLAGFCLSNINK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009577Sm_multidrug_ex