prot_F-serratus_M_contig971.21043.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig971.21043.1
Unique Nameprot_F-serratus_M_contig971.21043.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length355
Homology
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Match: D8LGR4_ECTSI (Domain repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR4_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 3.780e-71
Identity = 132/317 (41.64%), Postives = 182/317 (57.41%), Query Frame = 0
Query:   30 RGIGNVLVVLSMVAMLAARCLEVAEGVSMGGDHSCSMFDDGTIKCWGYNSVGQLGLGDTVHRGSSSSDMGDNLPEVDLGEDFEAAGVTCGLDHSCAWSRVGKLKCWGGNDFGQLGYGDTSARGNTTDSMGDSLPYISLGMGHAATFAVAANHFTCVLLLDGSIKCFGRADWGQVGSGNATNNVGDNANEMGDNLAVVKLVAPGANYTASSLAAYNGPCAVMQSDVAASVALKCWGPNGYGSLGVGDHFNRGDDPDEMEDLLPTARLGTGLSAVEIVTGMDFVCAIVEDGLVKCWGRNPNGQCGLGDVETYGNDADEM 346
            RG G  +   + V +  A C+++ E +++G DH+C + DD T+KC+G N+ GQLGLGDT  RG S+  MGD+L  VDLG       ++ G DH+CA    G LKC+G N+ GQLG  DT  RG+    MGD LP +SLG    A    A    TCVLL +G+++C+G A++G +G G+ T   G+    + D++ +      G N T +  A   GPCAV Q       +LKCWG   YG  G G   + GD+P EM + LPT  LG G+    I  G D+ CA+++DG +KCWGR   GQ G   + T G+D DEM
Sbjct:    4 RGGGAAMAFAAAVGL--ACCVDLGEALAVGTDHACVLLDDATVKCFGQNNYGQLGLGDTDDRGQSAGTMGDSLTAVDLGTGATVVAMSAGSDHTCAVLADGSLKCFGRNNMGQLGLDDTDDRGDEAFEMGDDLPAVSLGTNRTAVAVSAQGDRTCVLLDNGNVRCWGDAEYGALGGGDETT-TGNGDGTIADSVDL------GVNGTNTVGAIGGGPCAVFQDG-----SLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPTVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEAILTVGDDPDEM 306          
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Match: A0A812PY59_9DINO (UVR8 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812PY59_9DINO)

HSP 1 Score: 237 bits (604), Expect = 5.230e-71
Identity = 137/317 (43.22%), Postives = 185/317 (58.36%), Query Frame = 0
Query:   34 NVLVVLSMVAMLAARCLEVAEGVSMGGDHSCSMFDDGTIKCWGYNSVGQLGLGDTVHRGSSSSDMGDNLPEVDLGEDFEAAGVTCGLDHSCAWSRVGKLKCWGGNDFGQLGYGDTSARGNTTDSMGDSLPYISLGMGHAATFAVAANHFTCVLLLDGSIKCFGRADWGQVGSGNATNNVGDNANEMGDNLAVVKLVAPGANYTASSLAAYNG-PCAVMQSDVAASVALKCWGPNGYGSLGVGDH-FNRGDDPDEMEDLLPTARLGTGLSAVEIVTGMDFVCAIVEDGLVKCWGRNPNGQCGLGDVETY--GNDADEM 346
             +L +LS V +L A   EVA+ +S+G  H C+M   G++KCWG N   QLG GD V RG  +++MG +LP +DLG    A  V  G  H+CA    G LKCWG    G+LGYGD   RG  +D MGD LP + LG G  A        F+C +L + S+KC+G+  +GQ+G G  T+N+G  ++EMGD+L  V L   G   TA+ + A +   CA +        +LKCWG   YG LG+G + +  G    EM D LPT  LGTG +AVE+  G+   CA +++G VKCWGRN N Q GLG   +   G+DA+EM
Sbjct:    5 KMLALLSAVCILTAVAEEVAK-LSLGDWHVCAMGSQGSVKCWGNNGNAQLGQGDDVRRGDGANEMGKSLPTIDLGTGRHALEVNSGASHNCARLDDGLLKCWGYGHLGRLGYGDQVQRGGNSDEMGDFLPTVELGTGRTAVQLALGYEFSCAVLDNASVKCWGQGGYGQLGIG-TTSNMGAGSSEMGDHLPPVDL---GTGRTAADVTAGSYFACARLDDS-----SLKCWGHGEYGQLGIGSNSYTVGRVSGEMGDNLPTVDLGTGRTAVELSAGVFHACARLDNGSVKCWGRNNNNQLGLGFATSINMGDDANEM 311          
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Match: A0A540WM56_9DELT (Tandem-95 repeat protein n=7 Tax=Myxococcus TaxID=32 RepID=A0A540WM56_9DELT)

HSP 1 Score: 242 bits (618), Expect = 6.410e-71
Identity = 136/299 (45.48%), Postives = 175/299 (58.53%), Query Frame = 0
Query:   51 EVAEGVSMGGDHSCSMFDDGTIKCWGYNSVGQLGLGDTVHRGSSSSDMGDNLPEVDLGEDFEAAGVTCGLDHSCAWSRVGKLKCWGGNDFGQLGYGDTSARGNTTDSMGDSLPYISLGMGHAATFAVAAN--HFTCVLLLDGSIKCFGRADWGQVGSGNATNNVGDNANEMGDNLAVVKLVAPGANYTASSLAAYNG-PCAVMQSDVAASVALKCWGPNGYGSLGVGDHFNRGDDPDEMEDLLPTARLGTGLSAVEIVTGMDFVCAIVEDGLVKCWGRNPNGQCGLGDVETYGNDADEM 346
            +V   V  G  H+C++F DG +KCWG+N  GQLGL D  +RG    +MGD LP V LG   +   +  G  ++CA    G +KCWG N  G LG GDT +RG     M ++LP + LG G  A  A+AAN   +TC +L D ++KC+G +D  Q+G G+  N  GD   EMGD L  V L   GA  TA +LAA +G  CA++  D      +KCWG N +G LG+GD  +RGDDPDEM D LP   LG G +A  I  G    CA+++DG VKCWG N  GQ GLGD E  G+   EM
Sbjct:  239 DVPNSVVAGPLHTCAVFQDGRVKCWGFNEYGQLGLEDAANRGDGPGEMGDLLPFVRLGAGQKVTSLHLGAYYTCALLESGAVKCWGRNIAGMLGLGDTQSRGAVPGGMDEALPPVDLGTGRTAK-ALAANGSDYTCAILDDDTVKCWGDSDRAQLGLGDVRNR-GDGPGEMGDALPPVDL---GAGRTAKALAAGSGHTCALLDDDT-----VKCWGYNVFGQLGLGDTEDRGDDPDEMGDALPRVELGAGRTARAIAAGGYSTCALLDDGSVKCWGYNEYGQLGLGDTEPRGDGPGEM 527          
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Match: A0A812N2T7_9DINO (HERC4 protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812N2T7_9DINO)

HSP 1 Score: 247 bits (630), Expect = 9.250e-71
Identity = 133/295 (45.08%), Postives = 174/295 (58.98%), Query Frame = 0
Query:   53 AEGVSMGGDHSCSMFDDGTIKCWGYNSVGQLGLGDTVHRGSSSSDMGDNLPEVDLGEDFEAAGVTCGLDHSCAWSRVGKLKCWGGNDFGQLGYGDTSARGNTTDSMGDSLPYISLGMGHAATFAVAANHFTCVLLLDGSIKCFGRADWGQVGSGNATNNVGDNANEMGDNLAVVKLVAPGANYTASSLAA-YNGPCAVMQSDVAASVALKCWGPNGYGSLGVGDHFNRGDDPDEMEDLLPTARLGTGLSAVEIVTGMDFVCAIVEDGLVKCWGRNPNGQCGLGDVETYGNDADEM 346
            A  V  GG H+C+  DDG++KCWG N+ GQLGLG TV  G  S++MGD+LP V LG    A  +  G  H+CA    G +KCWG ND GQLG G T  RG  +  MGD LP ++LG G +A    A  +  C  L DG++KC+GR   GQ+G G  T++ GD ++EMGD+L  V L   G   +A  +AA +   CA +        ++KCWG N YG LG+G   + GD   EM D LP   LG G SAVE+  G    CA ++DG +KCWGRN  GQ GLG+ +  G+ + EM
Sbjct:   79 AVDVVPGGWHTCARLDDGSVKCWGSNNQGQLGLGTTVQMGDGSNEMGDHLPAVALGTGRSAVEMAAGWGHNCARLDDGSVKCWGNNDNGQLGLGTTDDRGGGSSEMGDYLPAVALGTGRSAVEVAAGWYHICARLDDGTVKCWGRNTHGQLGLG-TTDDRGDASSEMGDHLPAVAL---GTGRSAVEVAAGWGHTCARLDDG-----SVKCWGNNEYGQLGLGTTEHMGDGTSEMGDYLPAVALGAGRSAVEVAAGARHTCARLDDGSIKCWGRNAQGQLGLGNTDNMGDGSSEM 364          
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Match: UPI001CBB075E (Ig-like domain-containing protein n=3 Tax=unclassified Myxococcus TaxID=2648731 RepID=UPI001CBB075E)

HSP 1 Score: 246 bits (628), Expect = 1.540e-70
Identity = 141/322 (43.79%), Postives = 184/322 (57.14%), Query Frame = 0
Query:   27 GGGRGIGNVLVVLSMVAMLA-ARCLEVAEGVSMGGDHSCSMFDDGTIKCWGYNSVGQLGLGDTVHRGSSSSDMGDNLPEVDLGEDFEAAGVTCGLDHSCAWSRVGKLKCWGGNDFGQLGYGDTSARGNTTDSMGDSLPYISLGMGHAATFAVAANHFTCVLLLDGSIKCFGRADWGQVGSGNATNNVGDNANEMGDNLAVVKLVAPGANYTASSLAAYN-GPCAVMQSDVAASVALKCWGPNGYGSLGVGDHFNRGDDPDEMEDLLPTARLGTGLSAVEIVTGMDFVCAIVEDGLVKCWGRNPNGQCGLGDVETYGNDADEM 346
            GGGRG  N++  L  V M + AR   +  G+  G    C++F+ G++KCWG N+ GQLGLGDT  RG    +MGD LP +DLG    A  +  GL+H CA    G +KCWG N  G+LG GDT  RG+    MG++LP +SLG G  A    A    TC LL DGS+KC+G  +WG++G G+     GD   EMGD L  V L   G   TA ++AA     CA++        ++KCWG N YG+LG+GD  +RGD+  EM D LP   LGTG +A  +  G  + CA+++DG VKCWG    GQ G GD    G    EM
Sbjct:  554 GGGRGF-NLMSNLPFVNMGSDARAAMMGLGMGFG----CALFEGGSVKCWGDNAQGQLGLGDTRRRGDGPGEMGDALPRLDLGAGRTAKTLVSGLNHLCAILDDGAVKCWGDNGNGRLGLGDTEHRGDGPGEMGNALPAVSLGTGRTAKALAAGGRHTCALLDDGSVKCWGDNNWGELGLGDTAER-GDGPGEMGDALPRVNL---GTGRTAKAIAAREFSTCALLDDG-----SIKCWGGNQYGALGLGDKVHRGDNAGEMGDALPRVDLGTGRTAKALTVGGIYTCALLDDGSVKCWGGGYWGQLGSGDWNERGGAPGEM 861          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig971.21043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGR4_ECTSI3.780e-7141.64Domain repeat protein n=2 Tax=Ectocarpus TaxID=287... [more]
A0A812PY59_9DINO5.230e-7143.22UVR8 protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A540WM56_9DELT6.410e-7145.48Tandem-95 repeat protein n=7 Tax=Myxococcus TaxID=... [more]
A0A812N2T7_9DINO9.250e-7145.08HERC4 protein n=4 Tax=Symbiodinium TaxID=2949 RepI... [more]
UPI001CBB075E1.540e-7043.79Ig-like domain-containing protein n=3 Tax=unclassi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 26..240
e-value: 1.4E-28
score: 101.6
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 241..345
e-value: 1.9E-13
score: 51.9
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 178..337
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 55..211
NoneNo IPR availablePFAMPF13540RCC1_2coord: 307..330
e-value: 2.2E-5
score: 24.1
coord: 56..82
e-value: 1.3E-8
score: 34.4
NoneNo IPR availablePANTHERPTHR45982FAMILY NOT NAMEDcoord: 56..344
NoneNo IPR availablePANTHERPTHR45982:SF1REGULATOR OF CHROMOSOME CONDENSATIONcoord: 56..344
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 130..180
score: 8.836
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 70..129
score: 9.861

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig971contigF-serratus_M_contig971:51165..63587 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig971.21043.1mRNA_F-serratus_M_contig971.21043.1Fucus serratus malemRNAF-serratus_M_contig971 40090..63592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig971.21043.1 ID=prot_F-serratus_M_contig971.21043.1|Name=mRNA_F-serratus_M_contig971.21043.1|organism=Fucus serratus male|type=polypeptide|length=355bp
MTEGRSRQGIVSAKLPCLVRCTSRSFGGGRGIGNVLVVLSMVAMLAARCL
EVAEGVSMGGDHSCSMFDDGTIKCWGYNSVGQLGLGDTVHRGSSSSDMGD
NLPEVDLGEDFEAAGVTCGLDHSCAWSRVGKLKCWGGNDFGQLGYGDTSA
RGNTTDSMGDSLPYISLGMGHAATFAVAANHFTCVLLLDGSIKCFGRADW
GQVGSGNATNNVGDNANEMGDNLAVVKLVAPGANYTASSLAAYNGPCAVM
QSDVAASVALKCWGPNGYGSLGVGDHFNRGDDPDEMEDLLPTARLGTGLS
AVEIVTGMDFVCAIVEDGLVKCWGRNPNGQCGLGDVETYGNDADEMETTY
RSLT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens