prot_F-serratus_M_contig970.21042.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig970.21042.1
Unique Name	prot_F-serratus_M_contig970.21042.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	103

Homology

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BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5KBK7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBK7_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 7.240e-14
Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 0

Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  KF +KD+G+  +Y GC I  + +    KL +  Y+ES++K+
Sbjct:  847 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFAALNKKFPVKDLGECTWYDGCAIAMDVENGVTKLSRTGYIESVLKR 936

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BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5K1G1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G1_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 9.420e-14
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 0

Query:    6 FAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            + Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  KF +KD+G+  +Y GC I  + +    KL Q  Y+ES++K+
Sbjct:  187 YEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKR 275

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BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5JFZ2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFZ2_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 9.510e-14
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D          +  KF +KD+G+  +Y GC I  + +    KL Q  Y+ES++K+
Sbjct:  405 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADGGERGELLASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKR 494

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BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5JRB0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB0_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 9.520e-14
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q   DPCVFRKVVDGE   ++V+ VDDIL  A D+   +        KF +KD+G+  +Y GC I  + +    KL Q  Y+ES++K+
Sbjct:  278 GYEQCGVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASPNKKFPMKDLGECTWYDGCAIAMHVEYGITKLSQTAYIESMLKR 367

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BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5K1I0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I0_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 9.820e-14
Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 0

Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  KF +KD+G+  +Y GC I  + +    KL Q  Y+E ++K+
Sbjct:  529 GYEQCRVDPCVFRKVVDGEVVGLIVMYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIEGMLKR 618

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BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5JDR8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR8_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.300e-13
Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 0

Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  KF +KD+G+  +Y GC I  + +    KL Q  Y+E ++K+
Sbjct:  169 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNMKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIEIMLKR 258

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BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5KW89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW89_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 2.110e-13
Identity = 35/91 (38.46%), Postives = 56/91 (61.54%), Query Frame = 0

Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  +F +KD+G+  +Y GC I  + +    KL Q  Y++S++++
Sbjct:   34 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKEFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIDSMLQR 123

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BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5K2N9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2N9_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.250e-13
Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VD IL  A D+   +     +  KF +KD+G   +Y GC I  + +    KL Q  Y+ES++K+
Sbjct:  277 GYGQCRVDPCVFRKVVDGEVVGLIVIYVDGILV-AADEGEREELFASLNKKFPVKDLGGCTWYDGCAIAMDVENGITKLSQTAYIESMLKR 366

[Close]

BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5K8K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K4_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.540e-13
Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 0

Query:    1 MTAIGFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            + A G+ Q ++DPCVFR++VDGE   ++V+ VDDIL  A +Q   +  A+ +  KF +KD+G+  +Y G  I  + +    KL Q  Y+ESI+K+
Sbjct:  965 LIANGYEQCRADPCVFRRMVDGEVVGLIVIYVDDILLVASEQERQELLAS-LQKKFPVKDLGECTWYDGIGIEMDLENGITKLSQTAYIESIIKR 1058

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BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5L4A4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A4_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.210e-13
Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 0

Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  KF ++ +G+  +Y GC I  + +    KL Q  Y+ES++K+
Sbjct:  152 GYEQCRVDPCVFRKVVDGEVVSLIVIYVDDILVVA-DEGEREELFASLNKKFPVESLGEYTWYDGCAIAMDVENGITKLSQTAYIESMLKR 241

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KBK7_9PHAE	7.240e-14	40.66	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5K1G1_9PHAE	9.420e-14	41.11	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JFZ2_9PHAE	9.510e-14	41.76	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JRB0_9PHAE	9.520e-14	41.76	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K1I0_9PHAE	9.820e-14	40.66	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JDR8_9PHAE	1.300e-13	40.66	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KW89_9PHAE	2.110e-13	38.46	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K2N9_9PHAE	2.250e-13	40.66	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K8K4_9PHAE	2.540e-13	40.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L4A4_9PHAE	3.210e-13	39.56	Reverse transcriptase Ty1/copia-type domain-contai...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 3..96 e-value: 8.7E-14 score: 51.7

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig970	contig	F-serratus_M_contig970:321606..321914 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig970.21042.1	mRNA_F-serratus_M_contig970.21042.1	Fucus serratus male	mRNA	F-serratus_M_contig970 321282..322146 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig970.21042.1 ID=prot_F-serratus_M_contig970.21042.1|Name=mRNA_F-serratus_M_contig970.21042.1|organism=Fucus serratus male|type=polypeptide|length=103bp
MTAIGFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFAT
EVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKKVRRQE
GN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013103	RVT_2