prot_F-serratus_M_contig970.21042.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig970.21042.1
Unique Nameprot_F-serratus_M_contig970.21042.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length103
Homology
BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5JE75_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE75_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 5.690e-15
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  KF +KD+G+  +Y GC I  + +    KL Q  Y+ES++K+
Sbjct:   34 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKR 123          
BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 7.780e-15
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  KF +KD+G+  +Y GC I  + +    KL Q  YVES++K+
Sbjct:   34 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYVESMLKR 123          
BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5L296_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L296_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.130e-14
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 0
Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIV 93
            GF Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  KF +KD+G+  +Y GC I  + +    KL Q  Y+ES++
Sbjct:   34 GFEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGDREELFASLNKKFPVKDLGECTWYDGCAIAMDVENCITKLSQTAYIESML 121          
BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.240e-14
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  KF +KD+G+  +Y GC I  + +    KL Q  Y+ES++K+
Sbjct:  103 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGDREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYIESMLKR 192          
BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5JNU5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU5_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.510e-14
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  KF +KD+G+  +Y GC I  + +    KL Q  Y+ES++K+
Sbjct:  428 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKR 517          
BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.520e-14
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   +     +  KF +KD+G+  +Y GC I  + +    KL Q  Y+ES++K+
Sbjct:  670 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKR 759          
BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 2.100e-14
Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            GF Q K+DPCVFRK+VD  A M++V+ VDDIL    D+   +  A+ +  KF  K++G+  ++ GC I R+ K   L++ Q  Y+ S+VK+
Sbjct:  936 GFEQCKADPCVFRKMVDEVAVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVKGGTLRISQTAYIGSMVKR 1025          
BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5JFS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFS2_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 2.760e-14
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 0
Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A + A  + FA+ +  KF +KD+G+  +Y GC      +    KL Q  Y+ES++K+
Sbjct:  276 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGAREELFAS-LNKKFPVKDLGECTWYDGCAFAMGVENGITKLSQTAYIESMLKR 365          
BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5JMA7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA7_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 3.580e-14
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDIL  A D+   + F   +  KF +KD+G+  +Y G  I  + +    +L Q  Y+ESI+K+
Sbjct:  149 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREEFFASLNKKFPVKDLGECTWYDGYAIAMDIENDITRLSQTAYIESILKR 238          
BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Match: A0A6H5KF18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF18_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 3.780e-14
Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    5 GFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFATEVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKK 95
            G+ Q + DPCVFRKVVDGE   ++V+ VDDI+  A D+   +     +  KF +KD+G+  +Y GC I  + +    KL Q  Y+ES++K+
Sbjct:  383 GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIIV-AADEGEREELFASLNKKFPVKDVGECTWYDGCAIAMDVENGITKLSQTAYIESMLKR 472          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig970.21042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE75_9PHAE5.690e-1541.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWY8_9PHAE7.780e-1542.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L296_9PHAE1.130e-1442.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JXU1_9PHAE1.240e-1441.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JNU5_9PHAE1.510e-1441.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JI74_9PHAE1.520e-1441.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L060_9PHAE2.100e-1441.76Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JFS2_9PHAE2.760e-1442.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMA7_9PHAE3.580e-1441.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KF18_9PHAE3.780e-1440.66Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..96
e-value: 8.7E-14
score: 51.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig970contigF-serratus_M_contig970:321606..321914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig970.21042.1mRNA_F-serratus_M_contig970.21042.1Fucus serratus malemRNAF-serratus_M_contig970 321282..322146 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig970.21042.1 ID=prot_F-serratus_M_contig970.21042.1|Name=mRNA_F-serratus_M_contig970.21042.1|organism=Fucus serratus male|type=polypeptide|length=103bp
MTAIGFAQAKSDPCVFRKVVDGEAEMVVVVLVDDILAHAKDQASMDRFAT
EVGHKFKLKDMGDVGYYMGCHITRNCKARELKLDQHLYVESIVKKVRRQE
GN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2