prot_F-serratus_M_contig97.21035.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig97.21035.1
Unique Nameprot_F-serratus_M_contig97.21035.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length309
Homology
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BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5KAY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY6_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.600e-10
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 0 
Query:  223 DWQGQSFTSAALLTAIKEEDAEADAESTPSAR-KSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIW 306
            DW   ++ ++ +L  I +ED  + A +T + R KS HCVPR  EL+  ER+R+  A   S+ QL+R ELD KETG KR+V  E+W
Sbjct:    3 DWDENAYLASRVLEVIADEDRASGAGATTAGRRKSKHCVPRAVELMVAERFRERLAA--SRTQLSRTELDNKETGSKRSVYFELW 85
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5KAY6_9PHAE1.600e-1044.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..308
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..57
NoneNo IPR availableTMHMMTMhelixcoord: 36..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:756907..763461 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21035.1mRNA_F-serratus_M_contig97.21035.1Fucus serratus malemRNAF-serratus_M_contig97 756808..765149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig97.21035.1 ID=prot_F-serratus_M_contig97.21035.1|Name=mRNA_F-serratus_M_contig97.21035.1|organism=Fucus serratus male|type=polypeptide|length=309bp
MADGRERLGPAGLSSVSRRQRERRYDRNQQLQRAKVMRALTAAAVVMVCV
VTSVVVAHTHTPWGEHEEDLEEGSSSRSSSSDDDTTLASKATRPTSDKGK
GKDGGAGKRKNVHRAAARKAHGREYIRWSLTLLQRACAHRSISKMSTEKR
KEVLVDALRAQDNAMKRPSPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQ
QLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEEDAEADAEST
PSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRN
VVVEIWEA*
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