prot_F-serratus_M_contig97.21029.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig97.21029.1
Unique Name	prot_F-serratus_M_contig97.21029.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	353

Homology

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BLAST of mRNA_F-serratus_M_contig97.21029.1 vs. uniprot
Match: A0A7S0ZEF2_9RHOD (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEF2_9RHOD)

HSP 1 Score: 272 bits (696), Expect = 7.980e-86
Identity = 147/294 (50.00%), Postives = 191/294 (64.97%), Query Frame = 0

Query:   58 EWDANFFSPAKINLFLRVLRKRSDGFHDLASLFQTVAFGDNLFFKILPESADGDEFGCDMDGVPQDKTNLVLKALELFRMKTATNIYFKVYLSKRVPPEAGLGGGSSNAATALFAANELAGRPASLRDLQAWSATLGSDITFFLSTGTCYCTGRGEILHPQNPLPPSRIWLVKPREGLSTRTVFGHIDYDRLSPVEPSQLLHQFTQHGLD-PHFVNDLESPAFKAMPSLLHMKQELEGLGFKHVVMSGSGSTMFCIGNPTGDGHWHEHFSKKWGATIVKTHYINRASDPHTWYA 350
            EWD +  SPAKIN+FLR+LRKR DGFH+LASLFQ ++  D L  +   E A  D   C+M GVP D +NL+LKAL++FR  T T  +F V L K VP EAGLGGGS+NAA+AL+A NEL+GRPA+   L  + A  GSDI+FF S GT YCTGRGEI+     LP   +++VKP  G+ST  VF  +DY+ LS  +P ++L++     L     VNDLE P+FK MPSL+ +K++L   GF  V+MSGSGS+ +CIG P       +  S   G  I K  +INR  +P  WY+
Sbjct:   69 EWDIHVTSPAKINIFLRILRKREDGFHELASLFQAISLSDRLSLRSQSELAK-DSMECNMPGVPTDSSNLILKALDVFRKNTGTKEFFHVRLEKNVPMEAGLGGGSANAASALWAINELSGRPATNAQLAEYGAEFGSDISFFFSNGTAYCTGRGEIMEEVESLPSLELYVVKPNVGMSTGAVFRAMDYNELSKTDPKKILNEVLSGNLSRADLVNDLEKPSFKLMPSLMELKKKLIEFGFDVVLMSGSGSSFYCIGVPNCVTWMTDLDSVSPGIFIQKARFINR--NPDQWYS 359

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BLAST of mRNA_F-serratus_M_contig97.21029.1 vs. uniprot
Match: A0A2V3J5K4_9FLOR (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K4_9FLOR)

HSP 1 Score: 268 bits (686), Expect = 7.580e-85
Identity = 141/275 (51.27%), Postives = 184/275 (66.91%), Query Frame = 0

Query:   55 APGEWDANFFSPAKINLFLRVLRKRSDGFHDLASLFQTVAFGDNLFFKILPESADG----DEFGCDMDGVPQDKTNLVLKALELFRMKTATNIYFKVYLSKRVPPEAGLGGGSSNAATALFAANELAGRPASLRDLQAWSATLGSDITFFLSTGTCYCTGRGEILHPQNPLPPSRIWLVKPREGLSTRTVFGHIDYDRLSPVEPSQLLHQFTQHGLDPHFVNDLESPAFKAMPSLLHMKQELEGLGFKHVVMSGSGSTMFCIGNPTGDGHWHEHF 325
            +P EWD    SP+KINLFLRV+ KR+DG+H+LASL Q+++  D L+F +  E  DG    D   CD   +P D +NLVLKA+E FR KT    YFKV L KRVP EAGLGGGS+NAATAL+AAN+L+G+P +   L  + A  GSDI+FFLS GT YCTGRGEI+     LPP  +++VKP EGLST  VF ++D    S  +P +LL +  +  +   FVNDLE+P+F+ MP L  +K++L   GF  V+MSGSG++ FC+G P     W E F
Sbjct:   15 SPDEWDLRLGSPSKINLFLRVVGKRADGYHELASLMQSISLHDTLYFSVKTEK-DGKPHEDSLECDNSDIPTDSSNLVLKAIEKFRSKTGIEKYFKVRLEKRVPHEAGLGGGSANAATALWAANQLSGKPCTAEQLAEFGADFGSDISFFLSEGTAYCTGRGEIMEFVPRLPPQALYIVKPYEGLSTAEVFKNMDLSECSEKDPRELLRKMQKGVIFADFVNDLETPSFRLMPRLKTLKEDLYKAGFNVVLMSGSGTSFFCLGQP-----WEEDF 283

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BLAST of mRNA_F-serratus_M_contig97.21029.1 vs. uniprot
Match: A0A812VK29_9DINO (ISPE protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812VK29_9DINO)

HSP 1 Score: 266 bits (680), Expect = 4.610e-83
Identity = 150/297 (50.51%), Postives = 193/297 (64.98%), Query Frame = 0

Query:   64 FSPAKINLFLRVLRKRSDGFHDLASLFQTVAFGDNLFFKILPESADGDEFGCDMDGVPQDKTNLVLKALELFRMKTATNIYFKVYLSKRVPPEAGLGGGSSNAATALFAANELAGRPASLRDLQAWS--ATLGSDITFFLSTGTCYCTGRGEILHPQNPLPPS---RIWLVKPREGLSTRTVFGHIDYDRLSPVEPSQLLHQFTQHGLD-PHFVNDLESPAFKAMPSLLHMKQEL-EGLGFKHVVMSGSGSTMFCIGNPTGDGHWHEHFSKKWGAT--IVKTHYINRASDPHTWYAE 351
            FSPAK+NLFLR++R+R DG+HDLASLF TVAFGD L  + LP+SA+ D   C++ GVP D +NLV++AL+LFR K+    +F V L K +P +AG+GGGSSNAATA F AN+L G PA+  DL +W     +GSD TFFLS GT YCTGRGEI+ P + LP      ++LVKP  GLST  VF  +D   LS  +P +LL  F   G     +VNDLE PAFK  P L  +K+ L E   F+ V+MSGSGST+FC+G+P G     E  +K       I +T ++ R S P  WY +
Sbjct:   91 FSPAKVNLFLRIIRRRPDGYHDLASLFHTVAFGDKLVLEALPDSAEQDRLECNLPGVPVDDSNLVIRALKLFREKSGIRRFFGVTLEKEIPAQAGMGGGSSNAATAFFGANQLCGYPATPEDLISWGDDPVIGSDATFFLSEGTAYCTGRGEIVTPIDGLPIKDGLSVYLVKPNYGLSTGKVFQVMDLSALSTTDPEELLQTFKDKGTSHSSWVNDLEKPAFKVSPELRDLKKYLAEEWDFEAVLMSGSGSTIFCLGDPKGGAKAFEAATKNQFDIEGIWQTEFMRRPS-PTDWYTK 386

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BLAST of mRNA_F-serratus_M_contig97.21029.1 vs. uniprot
Match: A0A1M3CW31_9CHLA (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Chlamydiales bacterium 38-26 TaxID=1895743 RepID=A0A1M3CW31_9CHLA)

HSP 1 Score: 261 bits (667), Expect = 2.070e-82
Identity = 143/287 (49.83%), Postives = 186/287 (64.81%), Query Frame = 0

Query:   65 SPAKINLFLRVLRKRSDGFHDLASLFQTVAFGDNLFFKILPESADGDEFGCDMDGVPQDKTNLVLKALELFRMKTATNIYFKVYLSKRVPPEAGLGGGSSNAATALFAANELAGRPASLRDLQAWSATLGSDITFFLSTGTCYCTGRGEILHPQNPLPPSRIWLVKPREGLSTRTVFGHIDYDRLSPVEPSQLLHQFTQHGLDPHFVNDLESPAFKAMPSLLHMKQELEGLGFKHVVMSGSGSTMFCIGNPTGDGHWHEHFSKKWGATIVKTHYINRASDPHTWYAE 351
            SPAKINLFL++LR+R DG+HDLASLFQT++  DNL F      AD DE  C    +P D +NL++KA++LFR KT      KV+L K +P EAGLGGGSSNAAT L+A NEL  R   L+DL  WSA +GSDITFF S GT YCTGRGEI++  NPLP   +W+ KP +GLST  VF H+D  +LS  +P + L  F  +G   H+ NDLE PAF+  P+L H+KQ+L  +GF  V+M+GSG+  +C+G+ T          +  G T     +I R   P  WY++
Sbjct:   17 SPAKINLFLQILRRRVDGYHDLASLFQTISLYDNLTFSF----ADKDELTCSDACLPTDSSNLIIKAIDLFRRKTGLKFGLKVHLEKHIPYEAGLGGGSSNAATTLWALNELHSRAYPLQDLMTWSAEIGSDITFFFSNGTAYCTGRGEIINSLNPLPRESLWIAKPAQGLSTPAVFKHLDLTQLSLHDPERTLIGF-YNGRPLHY-NDLEEPAFRIDPTLHHIKQQLIEMGFATVLMTGSGTAFYCLGSKTP--------YQIPGVTFYPATFIRR--QPGQWYSQ 287

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BLAST of mRNA_F-serratus_M_contig97.21029.1 vs. uniprot
Match: A0A812IXS5_9DINO (ISPE protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812IXS5_9DINO)

HSP 1 Score: 263 bits (673), Expect = 6.200e-82
Identity = 143/271 (52.77%), Postives = 180/271 (66.42%), Query Frame = 0

Query:   64 FSPAKINLFLRVLRKRSDGFHDLASLFQTVAFGDNLFFKILPESADGDEFGCDMDGVPQDKTNLVLKALELFRMKTATNIYFKVYLSKRVPPEAGLGGGSSNAATALFAANELAGRPASLRDLQAWS--ATLGSDITFFLSTGTCYCTGRGEILHPQNPLPPS---RIWLVKPREGLSTRTVFGHIDYDRLSPVEPSQLLHQFTQHGLD-PHFVNDLESPAFKAMPSLLHMKQELEG-LGFKHVVMSGSGSTMFCIGNPTGDGHWHEHFSK 327
            FSPAK+NLFLR++R+R DGFHDLASLF TVAFGD L  ++LPE A+ D   C++ GVP D +NLV++AL+LFR K+    +F V L K +P +AG+GGGSSNAA A F AN+L G PA+  DL +W     +GSD TFFLS GT YCTGRGEI+ P   LP      ++LVKP  GLST  VF  +D   LS  +P +LL  F   G     +VNDLE PAFK  P L  +K+ L G   F+ V+MSGSGST+FC+G+P G     E  +K
Sbjct:  109 FSPAKVNLFLRIIRRRPDGFHDLASLFHTVAFGDKLVLEVLPEDAEHDRLECNLPGVPVDDSNLVIRALKLFREKSGVQRFFGVKLEKEIPAQAGMGGGSSNAAAAFFGANQLCGCPATPEDLISWGDDPVIGSDATFFLSEGTAYCTGRGEIVTPIEGLPIKDGLSVYLVKPNYGLSTGKVFKAMDLSALSTEDPEELLQTFKDKGTSHSSWVNDLEKPAFKVSPELRDLKEYLAGDWDFEAVLMSGSGSTIFCLGDPKGGAEAFEASTK 379

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig97.21029.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig97.21029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S0ZEF2_9RHOD	7.980e-86	50.00	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ...	[more]
A0A2V3J5K4_9FLOR	7.580e-85	51.27	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ...	[more]
A0A812VK29_9DINO	4.610e-83	50.51	ISPE protein n=2 Tax=unclassified Symbiodinium Tax...	[more]
A0A1M3CW31_9CHLA	2.070e-82	49.83	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ...	[more]
A0A812IXS5_9DINO	6.200e-82	52.77	ISPE protein n=1 Tax=Symbiodinium natans TaxID=878...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 51..217 e-value: 2.9E-49 score: 168.8
IPR004424	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	TIGRFAM	TIGR00154	TIGR00154	coord: 63..311 e-value: 1.2E-49 score: 167.4
IPR004424	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	PANTHER	PTHR43527:SF2	4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE, CHLOROPLASTIC	coord: 61..324
IPR004424	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	HAMAP	MF_00061	IspE	coord: 61..336 score: 26.378
IPR036554	GHMP kinase, C-terminal domain superfamily	GENE3D	3.30.70.890		coord: 221..337 e-value: 2.4E-20 score: 74.8
IPR036554	GHMP kinase, C-terminal domain superfamily	SUPERFAMILY	55060	GHMP Kinase, C-terminal domain	coord: 221..321
None	No IPR available	PANTHER	PTHR43527	FAMILY NOT NAMED	coord: 61..324
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..352
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..18 score: 0.472
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 63..216

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig97	contig	F-serratus_M_contig97:381853..414315 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig97.21029.1	mRNA_F-serratus_M_contig97.21029.1	Fucus serratus male	mRNA	F-serratus_M_contig97 381729..414763 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig97.21029.1 ID=prot_F-serratus_M_contig97.21029.1|Name=mRNA_F-serratus_M_contig97.21029.1|organism=Fucus serratus male|type=polypeptide|length=353bp
MKLGVIANMLLSASPTCSFLLPLGFDDGLSRCHGAGGSLVGVRNRRSGMC
ATFTAPGEWDANFFSPAKINLFLRVLRKRSDGFHDLASLFQTVAFGDNLF
FKILPESADGDEFGCDMDGVPQDKTNLVLKALELFRMKTATNIYFKVYLS
KRVPPEAGLGGGSSNAATALFAANELAGRPASLRDLQAWSATLGSDITFF
LSTGTCYCTGRGEILHPQNPLPPSRIWLVKPREGLSTRTVFGHIDYDRLS
PVEPSQLLHQFTQHGLDPHFVNDLESPAFKAMPSLLHMKQELEGLGFKHV
VMSGSGSTMFCIGNPTGDGHWHEHFSKKWGATIVKTHYINRASDPHTWYA
ET*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR004424	IspE
IPR036554	GHMP_kinase_C_sf
IPR020568	Ribosomal_S5_D2-typ_fold