prot_F-serratus_M_contig97.21028.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig97.21028.1
Unique Nameprot_F-serratus_M_contig97.21028.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length110
Homology
BLAST of mRNA_F-serratus_M_contig97.21028.1 vs. uniprot
Match: A0A453BS89_AEGTS (L51_S25_CI-B8 domain-containing protein n=2 Tax=Triticinae TaxID=1648030 RepID=A0A453BS89_AEGTS)

HSP 1 Score: 79.7 bits (195), Expect = 1.400e-17
Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    1 MAWRASVSRNLRELRFCCCNVSTTGIPVREFFKNNYAELKTQNPAFPILLREGTGANPYLLATYD 65
            MAWRAS+SRN++E+RF  C  S    P REF K NY ++KT+NP  P+L+RE +G  P L A YD
Sbjct:    1 MAWRASLSRNVKEIRFLFCQSSPASGPAREFVKKNYGDIKTRNPTLPVLIRECSGVQPQLWARYD 65          
BLAST of mRNA_F-serratus_M_contig97.21028.1 vs. uniprot
Match: N1R5H7_AEGTA (L51_S25_CI-B8 domain-containing protein n=1 Tax=Aegilops tauschii TaxID=37682 RepID=N1R5H7_AEGTA)

HSP 1 Score: 77.4 bits (189), Expect = 1.270e-16
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    1 MAWRASVSRNLRELRFCCCNVSTTGIPVREFFKNNYAELKTQNPAFPILLREGTGANPYLLATYDYGVEQHVPL 74
            MAW AS+SRN++E+RF  C  S    P REF K NY ++KT+NP  P+L+RE +G  P L A Y  G  QH+ +
Sbjct:    1 MAWGASLSRNVKEIRFLFCQSSPASGPAREFVKKNYGDIKTRNPTLPVLIRECSGVQPQLWARY--GTLQHIKM 72          
BLAST of mRNA_F-serratus_M_contig97.21028.1 vs. uniprot
Match: A0A293LWG3_ORNER (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LWG3_ORNER)

HSP 1 Score: 77.8 bits (190), Expect = 1.600e-16
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    9 RNLRELRFCCCNVSTTGIPVREFFKNNYAELKTQNPAFPILLREGTGANPYLLATYDYGVEQHVPLNGLSQDDIAKEVEK 88
            ++L+ELRF  C  S     VR+F + +Y  LKTQNP FPIL+RE +   P + A Y +G E H  LNG++ D + K VE+
Sbjct:   11 KHLKELRFHLCQKSPESAGVRQFIEKHYVSLKTQNPGFPILVRECSRTEPKVYARYAFGKESHASLNGMNSDQVLKTVEQ 90          
BLAST of mRNA_F-serratus_M_contig97.21028.1 vs. uniprot
Match: Q7XNR1_ORYSJ (OSJNBa0033H08.7 protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XNR1_ORYSJ)

HSP 1 Score: 75.9 bits (185), Expect = 4.740e-16
Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MAWRASVSRNLRELRFCCCNVSTTGIPVREFFKNNYAELKTQNPAFPILLREGTGANPYLLATYD 65
            MAWRA++SR ++E+RF  C  S    P REF K NY ++K +NP+ P+L+RE +G  P L A YD
Sbjct:    1 MAWRANLSRGVKEIRFLFCQSSPASAPAREFVKKNYGDIKARNPSLPVLIRECSGVEPQLWARYD 65          
BLAST of mRNA_F-serratus_M_contig97.21028.1 vs. uniprot
Match: A0A446L1B8_TRITD (L51_S25_CI-B8 domain-containing protein n=3 Tax=Triticinae TaxID=1648030 RepID=A0A446L1B8_TRITD)

HSP 1 Score: 77.8 bits (190), Expect = 6.570e-16
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    1 MAWRASVSRNLRELRFCCCNVSTTGIPVREFFKNNYAELKTQNPAFPILLREGTGANPYLLATYDYGVEQHVP 73
            MAWRAS+SRN++E+RF  C  S    P REF K NY ++KT+NP  P+L+RE +G  P L A Y  G +  +P
Sbjct:    1 MAWRASLSRNVKEIRFLFCQSSPASGPAREFVKKNYGDIKTRNPTLPVLIRECSGVQPQLWARY--GKQPSIP 71          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A453BS89_AEGTS1.400e-1753.85L51_S25_CI-B8 domain-containing protein n=2 Tax=Tr... [more]
N1R5H7_AEGTA1.270e-1648.65L51_S25_CI-B8 domain-containing protein n=1 Tax=Ae... [more]
A0A293LWG3_ORNER1.600e-1645.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
Q7XNR1_ORYSJ4.740e-1649.23OSJNBa0033H08.7 protein n=1 Tax=Oryza sativa subsp... [more]
A0A446L1B8_TRITD6.570e-1649.32L51_S25_CI-B8 domain-containing protein n=3 Tax=Tr... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 20..93
e-value: 1.4E-13
score: 61.1
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 28..78
e-value: 8.5E-11
score: 41.6
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PIRSFPIRSF005822NDUA2coord: 1..100
e-value: 4.6E-28
score: 95.6
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PANTHERPTHR12878NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNITcoord: 1..90
NoneNo IPR availableGENE3D3.40.30.10coord: 2..92
e-value: 1.8E-25
score: 91.0
NoneNo IPR availablePANTHERPTHR12878:SF0NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 2coord: 1..90
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 10..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:363043..381517 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21028.1mRNA_F-serratus_M_contig97.21028.1Fucus serratus malemRNAF-serratus_M_contig97 362329..381517 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig97.21028.1 ID=prot_F-serratus_M_contig97.21028.1|Name=mRNA_F-serratus_M_contig97.21028.1|organism=Fucus serratus male|type=polypeptide|length=110bp
MAWRASVSRNLRELRFCCCNVSTTGIPVREFFKNNYAELKTQNPAFPILL
REGTGANPYLLATYDYGVEQHVPLNGLSQDDIAKEVEKTVALGATLPRSP
MQPPFRSID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007741Ribosome/NADH_DH
IPR016464NADH_Ub_cplx-1_asu_su-2
IPR036249Thioredoxin-like_sf