prot_F-serratus_M_contig97.21018.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig97.21018.1
Unique Nameprot_F-serratus_M_contig97.21018.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length400
Homology
BLAST of mRNA_F-serratus_M_contig97.21018.1 vs. uniprot
Match: A0A8J4PVX8_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PVX8_9MYCE)

HSP 1 Score: 397 bits (1021), Expect = 3.000e-134
Identity = 192/366 (52.46%), Postives = 268/366 (73.22%), Query Frame = 0
Query:   35 VLRFKGSKHFRQRVVCSILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKVEINETGTTLKFKPGYVAGGR-ATHECGTTRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGGGGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAET---AAEKGTLPEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSR 396
            +L+++GS HFRQRV+CS LSGR IRI +IR         ++ + GL  +EA+FLRL+DK+TNGTK++IN TGTTL F PG + GG+  +HECGTTR + +F+E L+ L  F+K P ++TL+GITN+D+DL++D ++  TLP++R+FG+ EEG L + + +RGAPP GGG V F CPIV  LK I   D G I+RIRG AY T+VSPQ  NRV + ++G+L    PDV++ +DH  G   G SPG+ L+LVAE+TTG  L AE    + EK   PE+LG+  +  ++EEI NGGC+DS +QSLA+L MVLCPED+S++R+GK+T Y+I Y+R+L DFFG  F+++PD  + TV+ +C GIGFKN++R
Sbjct:    1 MLKYQGSTHFRQRVICSTLSGRPIRITNIR--------DQDEKPGLRDYEASFLRLIDKITNGTKIDINVTGTTLTFVPGIIIGGKNISHECGTTRGISYFVEALICLGPFAKVPLDVTLNGITNNDIDLTIDTIRTTTLPVIRKFGL-EEG-LNIKIIKRGAPPNGGGSVNFKCPIVPSLKAIQLVDEGKIRRIRGIAYATRVSPQFPNRVLDKAKGVLLEFTPDVYISSDHYRGNESGLSPGYGLTLVAETTTGCCLSAECMGGSGEKNETPEELGERAAISLMEEIYNGGCIDSHNQSLALLFMVLCPEDISKIRLGKITPYTIEYIRNLFDFFGVTFKIEPDQDSKTVVFTCLGIGFKNMAR 356          
BLAST of mRNA_F-serratus_M_contig97.21018.1 vs. uniprot
Match: A0A397J989_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397J989_9GLOM)

HSP 1 Score: 397 bits (1020), Expect = 4.110e-134
Identity = 192/367 (52.32%), Postives = 272/367 (74.11%), Query Frame = 0
Query:   33 SSVLRFKGSKHFRQRVVCSILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKVEINETGTTLKFKPGYVAGGRATHECGTTRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGGGGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAETAAEKGTLPEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSRGAT 399
            S VL+F G  +FRQR++ SILSG+ I+I+ IR         ++   GL   E  FLRL+DK+TNG+ +EIN TGT++ +KPG + GG+  H+CG +R++G+F+E L+ LA F+K PFNLTL+GITND++D+SVD ++ VTL  L RF V EEG LEL + +RG+ P GGG V F CP+++ LKPI + D G IKRIRG A CT+VSPQ ANR+  S+R +LNR +PDV+++TD   G   G+SPGFA+SLVAESTTG L+ AE AA+ G  PED+G+  +K++L EI+ GGC+DS +Q L +L+MVL  EDVS++R+G+LT ++I Y+R L++FF   F++KPDP T+T+L++C G+G+ N S+ +T
Sbjct:    2 SKVLKFSGHNYFRQRLILSILSGKTIKINKIR--------SDDNNPGLQDFEIGFLRLLDKVTNGSTLEINYTGTSVLYKPGVITGGKINHDCGISRAIGYFLEPLIALAPFAKNPFNLTLTGITNDNIDISVDTIRTVTLLQLGRF-VTEEG-LELKISKRGSAPLGGGEVTFKCPVMKSLKPIQYIDEGRIKRIRGIACCTRVSPQNANRMVNSARSILNRYIPDVYIYTDVYKGEESGKSPGFAISLVAESTTGVLISAEQAAKSGETPEDIGQRTAKILLTEIRKGGCIDSLNQWLILLMMVLSTEDVSKIRLGQLTAFTIQYIRDLKNFFDVTFKIKPDPATNTLLMACVGVGYINYSKKST 358          
BLAST of mRNA_F-serratus_M_contig97.21018.1 vs. uniprot
Match: A0A1Y1Z8N6_9FUNG (18S rRNA biogenesis protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z8N6_9FUNG)

HSP 1 Score: 395 bits (1016), Expect = 1.720e-133
Identity = 191/366 (52.19%), Postives = 267/366 (72.95%), Query Frame = 0
Query:   34 SVLRFKGSKHFRQRVVCSILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKVEINETGTTLKFKPGYVAGGRATHECGTTRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGGGGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAETAAEKGTLPEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSRGAT 399
            ++++F+G  +FRQR+V + LSGR +RI+ IR         E+   GL  +EA FLRL++K+TNG+ +EIN TGT + +KPG + GG+  H+CGT R +G+F+E L+ LA F K P N  L+GIT +++D+SVD ++ VTL  L+RFG  E+G LEL + +RGAPP GGG V F CPI+R LKP+ F D G IKRIRG AYCT+VSPQ ANR+ +S+R +LNR +PD++++TD   G   G+SPGFAL+LVAESTTGALL AE AA  G  PED+GK  +K++LEE+  GGC DS  Q + +L+MVL PEDVS++RIGK++ ++I YLR L+ FFG  F+++PDP   T+L++C G G+ N+++  T
Sbjct:    4 TIIKFEGHNYFRQRLVMATLSGRPVRIEKIR--------SEDDNPGLKDYEANFLRLLEKVTNGSHLEINYTGTAVFYKPGIIVGGKIQHDCGTARGVGYFLEALIALAPFGKLPMNALLTGITTNNLDISVDTIRTVTLMQLKRFGF-EDG-LELKINKRGAPPLGGGEVVFKCPIIRALKPLQFIDEGRIKRIRGIAYCTRVSPQTANRLVDSARSVLNRYIPDIYIYTDVFKGAESGKSPGFALTLVAESTTGALLSAELAANPGETPEDIGKKCAKMLLEEVNKGGCFDSVCQWVGLLMMVLGPEDVSKIRIGKISPFTIQYLRDLKSFFGVTFKIRPDPENKTILMACMGTGYVNVNKKTT 359          
BLAST of mRNA_F-serratus_M_contig97.21018.1 vs. uniprot
Match: A0A397V8X0_9GLOM (Putative RNA 3'-terminal phosphate cyclase-like protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397V8X0_9GLOM)

HSP 1 Score: 395 bits (1015), Expect = 2.430e-133
Identity = 194/367 (52.86%), Postives = 266/367 (72.48%), Query Frame = 0
Query:   33 SSVLRFKGSKHFRQRVVCSILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKVEINETGTTLKFKPGYVAGGRATHECGTTRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGGGGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAETAAEKGTLPEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSRGAT 399
            + +L+F G  +FRQR+V + LSG+ ++ID IR         ++   GL   EA FLRL+DK+TNG+ +EIN +GT++ FKPG + GG+  H+CGT R++G+F+E ++ LA FSK PFNLT  GITND+VDLS+D ++   L  LRRFG+ EEG LEL + +RGAPP GGG V F CPIV+ LKPI FTD G IKRIRG A CT+VSPQ  NR+ +++R +LNR +PDV+++TD   G   G+SPGFALSLVAESTT  L+ AE AA  G  PED+G+  +KL+L EI+ GGC+ S +Q L +L MVL PEDVS++R+G+LT ++I YLR +RDFF   F++K D  ++T+LL+C G+G+ N ++  T
Sbjct:    3 TKILKFSGHNYFRQRLVLATLSGKTVKIDKIR--------SDDNDPGLKDFEANFLRLLDKVTNGSIIEINYSGTSVLFKPGIITGGKIIHDCGTARAIGYFLEPMIALAPFSKDPFNLTFFGITNDNVDLSMDIIRTAVLLQLRRFGI-EEG-LELKISKRGAPPLGGGEVNFKCPIVKALKPIQFTDEGRIKRIRGIACCTRVSPQNTNRMVDAARSVLNRYIPDVYIYTDVYKGEESGKSPGFALSLVAESTTSVLITAEQAANPGETPEDIGRRTAKLLLSEIRKGGCIGSPNQWLMLLFMVLSPEDVSKIRLGQLTAFTIQYLRDIRDFFDVTFKIKQDAESNTLLLTCVGVGYINYNKKTT 359          
BLAST of mRNA_F-serratus_M_contig97.21018.1 vs. uniprot
Match: RCL1_DICDI (Probable RNA 3'-terminal phosphate cyclase-like protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=RCL1_DICDI)

HSP 1 Score: 395 bits (1016), Expect = 2.590e-133
Identity = 193/378 (51.06%), Postives = 268/378 (70.90%), Query Frame = 0
Query:   35 VLRFKGSKHFRQRVVCSILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKVEINETGTTLKFKPGYVAGGRA-THECGTTRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGGGGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAETAAEKGTL---------------PEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSR 396
            +L+F+GS HFRQR++CS LSG+AIRI +IR         E+ + GL  +EA+FLRLVDK+TNG+K+EIN TGT + + PG + GG+  THECGT R +G+F+E L+ L  F+K P ++TL+GITN+D+DL++D ++  TLP++R+FG+ EEG L + + +RGAPP GGG V F CPIV  LK I   D G I+RIRG AY T++SPQ +NRV + ++GLL    PDV++ +DH  G   G SPG+ L+LVAE+TTG  L AE  +  G                 PEDLG+  +  +LEEI NGGC+DS +QSLA+L MVLCPED+S++R+GK+T Y+I ++R LRDFFG  F+++PD  + TVL +C GIG+KN++R
Sbjct:    1 MLKFQGSTHFRQRIICSTLSGKAIRITNIR--------DEDEKPGLRDYEASFLRLVDKITNGSKIEINSTGTQITYIPGIIIGGKGITHECGTVRGIGYFVEALICLGPFAKAPLDITLNGITNNDIDLTIDTIRTTTLPIIRKFGI-EEG-LIIKIIKRGAPPNGGGSVNFKCPIVPHLKAIQLIDEGKIRRIRGIAYATRISPQFSNRVLDKAKGLLLEYTPDVYISSDHYKGNESGLSPGYGLTLVAETTTGCCLSAECMSNTGIATTEQQLQKQKSTSETPEDLGERTAFALLEEIFNGGCIDSHNQSLALLFMVLCPEDISKVRLGKITPYTIEFIRQLRDFFGVTFKIEPDQNSKTVLFTCLGIGYKNMAR 368          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4PVX8_9MYCE3.000e-13452.46Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A397J989_9GLOM4.110e-13452.32Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
A0A1Y1Z8N6_9FUNG1.720e-13352.1918S rRNA biogenesis protein n=1 Tax=Basidiobolus m... [more]
A0A397V8X0_9GLOM2.430e-13352.86Putative RNA 3'-terminal phosphate cyclase-like pr... [more]
RCL1_DICDI2.590e-13351.06Probable RNA 3'-terminal phosphate cyclase-like pr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013791RNA 3'-terminal phosphate cyclase, insert domainPFAMPF05189RTC_insertcoord: 220..320
e-value: 3.1E-31
score: 107.9
IPR000228RNA 3'-terminal phosphate cyclasePIRSFPIRSF005378RNA_3-term_P_cyclasecoord: 27..389
e-value: 1.4E-78
score: 262.3
IPR000228RNA 3'-terminal phosphate cyclasePANTHERPTHR11096RNA 3' TERMINAL PHOSPHATE CYCLASEcoord: 32..397
IPR016443RNA 3'-terminal phosphate cyclase type 2TIGRFAMTIGR03400TIGR03400coord: 36..396
e-value: 4.7E-138
score: 457.9
IPR016443RNA 3'-terminal phosphate cyclase type 2PANTHERPTHR11096:SF1RNA 3'-TERMINAL PHOSPHATE CYCLASE-LIKE PROTEINcoord: 32..397
IPR037136RNA 3'-terminal phosphate cyclase domain superfamilyGENE3D3.65.10.20coord: 38..371
e-value: 1.4E-132
score: 443.4
IPR036553RNA 3'-terminal phosphate cyclase, insert domain superfamilyGENE3D3.30.360.20coord: 221..316
e-value: 1.4E-132
score: 443.4
IPR023797RNA 3'-terminal phosphate cyclase domainPFAMPF01137RTCcoord: 37..372
e-value: 9.8E-55
score: 185.4
IPR020719RNA 3'-terminal phosphate cyclase-like, conserved sitePROSITEPS01287RTCcoord: 194..204
NoneNo IPR availablePRODOMPD397608coord: 230..307
e-value: 3.0E-18
score: 228.0
IPR013792RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/betaSUPERFAMILY55205EPT/RTPC-likecoord: 40..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:265143..270360 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21018.1mRNA_F-serratus_M_contig97.21018.1Fucus serratus malemRNAF-serratus_M_contig97 265048..270737 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig97.21018.1 ID=prot_F-serratus_M_contig97.21018.1|Name=mRNA_F-serratus_M_contig97.21018.1|organism=Fucus serratus male|type=polypeptide|length=400bp
MTTSKKMIPAVAKTTLASKLKTTNEPNDTITTSSVLRFKGSKHFRQRVVC
SILSGRAIRIDDIRPFPTSTSHQEEVQMGLMPHEAAFLRLVDKLTNGTKV
EINETGTTLKFKPGYVAGGRATHECGTTRSLGWFIEGLLPLALFSKTPFN
LTLSGITNDDVDLSVDALKAVTLPLLRRFGVAEEGRLELTVKRRGAPPGG
GGLVEFTCPIVRELKPIDFTDPGLIKRIRGNAYCTKVSPQIANRVAESSR
GLLNRLLPDVWVHTDHNAGRAGGESPGFALSLVAESTTGALLVAETAAEK
GTLPEDLGKLGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIG
KLTQYSITYLRHLRDFFGAYFRLKPDPLTSTVLLSCQGIGFKNLSRGAT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013791RNA3'-term_phos_cycl_insert
IPR000228RNA3'_term_phos_cyc
IPR016443RNA3'_term_phos_cyc_type_2
IPR037136RNA3'_phos_cyclase_dom_sf
IPR036553RPTC_insert
IPR023797RNA3'_phos_cyclase_dom
IPR020719RNA3'_term_phos_cycl-like_CS
IPR013792RNA3'P_cycl/enolpyr_Trfase_a/b