prot_F-serratus_M_contig97.21005.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig97.21005.1
Unique Nameprot_F-serratus_M_contig97.21005.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length931
Homology
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: A0A1W0A2A2_9STRA (RanBD1 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2A2_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.300e-6
Identity = 33/114 (28.95%), Postives = 63/114 (55.26%), Query Frame = 0
Query:  817 RAPGEENETVVRNFRA-KLFIFKNDEKTWGDLGVGILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKVTKTKNSISFMANMAEGGP-KHVMLKVTANEIQDLHNTVLALLP 928
            ++  E +E V+    A ++  FK +EK W DLG    +++++K+    R + RN +GKV++NA  YKG+KV  T N  +    + + G  +++ L + A+ +++L   +    P
Sbjct:  478 KSTSESDEDVIFEAEAVRIRQFKKEEKRWADLGSHPFKVLQNKSTKAARILSRNSIGKVMINAALYKGLKVNVTPNKKAITLVLIQDGILQNMHLGIAADRVEELKKAIEGATP 591          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: F0XWP8_AURAN (RanBD1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWP8_AURAN)

HSP 1 Score: 62.8 bits (151), Expect = 3.410e-6
Identity = 50/123 (40.65%), Postives = 71/123 (57.72%), Query Frame = 0
Query:  789 GGTXXXXXXXXXDDEEAEMPKDDPAQLERAPGEENETVVRNFRAKLFIFKND---EKTWGDLGVGILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKVTKTKNSISFMANMAEGGPKHVM 908
            GG XXXXXXX  DD+EA MPK++   ++R    +  TV  +  A     K D      W DLG G LR+ME + DG +R ++RND+GKV+LN      MKV KTK  ++  A+   G  ++++
Sbjct: 1007 GGAXXXXXXXAGDDDEA-MPKEELVAVQRGDDGDESTVFESRCAMRRYDKGDGGDAPQWRDLGKGQLRVME-RGDGDKRVVVRNDVGKVVLNFALAAAMKVRKTKAGVAVSADSGAGVQQYLL 1127          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: A0A232M0H3_9EURO (RanBD1 domain-containing protein n=1 Tax=Elaphomyces granulatus TaxID=519963 RepID=A0A232M0H3_9EURO)

HSP 1 Score: 62.8 bits (151), Expect = 3.470e-6
Identity = 33/105 (31.43%), Postives = 60/105 (57.14%), Query Frame = 0
Query:  820 GEENETVVRNFRAKLFIFKNDEKTWGDLGVGILRLMEHKTDGTRRFILR-NDMGKVLLNAGFYKGMKVTKTKNSISFMANMAEGGPKHVMLKVTANEIQDLHNTV 923
            GEE+E V+  F A+    K   ++W   G+G+LR+++HKT    R +LR    GKV+LNA   + +K T T +++ F+   ++  P+   ++V   E++ L  ++
Sbjct: 1120 GEEDEEVI--FEARARALKLVSESWESQGIGLLRILKHKTTSRSRVLLRAQPSGKVVLNAALMREIKYTLTGSAVQFLVPHSDDAPERWAVRVKKEEVERLMTSI 1222          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: A0A804L3N6_MUSAM (RanBD1 domain-containing protein n=4 Tax=Musa TaxID=4640 RepID=A0A804L3N6_MUSAM)

HSP 1 Score: 61.2 bits (147), Expect = 4.500e-6
Identity = 40/111 (36.04%), Postives = 64/111 (57.66%), Query Frame = 0
Query:  801 DDEEAEMPKDDPAQLERAPGEENETVVRNFRAKLFIFKND--EKTWGDLGVGILRL-----MEHKTDGTR-RFILRNDMGKVLLNAGFYKGMKVTKTKNSISFMANMAEGG 903
            DDEE +  K     LE+A  E+   VV   + K+++  +D  +K W D+GVG L +     +E  T  +R   ++RND+GK+L+NA  Y G+K+   KN+I+ + + A GG
Sbjct:  227 DDEEGDQKKPSSPSLEKAE-EKGIIVVHEAKCKVYVKPDDPSDKAWKDMGVGHLSIKCKEGVEKATKDSRPTIVIRNDVGKILVNALIYHGIKMNIQKNTITSIFHTAGGG 336          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: A0A6G0XJM3_9STRA (RanBD1 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJM3_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.080e-6
Identity = 35/108 (32.41%), Postives = 58/108 (53.70%), Query Frame = 0
Query:  817 RAPGEENETVVRNFRA-KLFIFKNDEKTWGDLGVGILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKVTKTKNSISFMANMAEGGPKHVMLKVTANEIQDLHNTV 923
            ++  E NETV+    A +L  FK+ EK W +LG    +L+++KT    R ++RN +GK+++NA  Y GMKV     S+  M  M +G   + +  +    + DL   +
Sbjct:  535 KSDSESNETVLFEEEAVRLRQFKSAEKEWANLGSHAFKLLQNKTTKATRILVRNSIGKIMVNAALYAGMKVQANPKSL-VMPLMNDGKLANYLFAMAPARVTDLKKEI 641          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1W0A2A2_9STRA3.300e-628.95RanBD1 domain-containing protein n=1 Tax=Thraustot... [more]
F0XWP8_AURAN3.410e-640.65RanBD1 domain-containing protein n=1 Tax=Aureococc... [more]
A0A232M0H3_9EURO3.470e-631.43RanBD1 domain-containing protein n=1 Tax=Elaphomyc... [more]
A0A804L3N6_MUSAM4.500e-636.04RanBD1 domain-containing protein n=4 Tax=Musa TaxI... [more]
A0A6G0XJM3_9STRA6.080e-632.41RanBD1 domain-containing protein n=1 Tax=Aphanomyc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000156Ran binding domainSMARTSM00160ranbd_3coord: 809..926
e-value: 6.0E-9
score: 39.2
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 820..910
e-value: 5.1E-13
score: 49.3
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 812..892
score: 14.096
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 723..928
e-value: 8.8E-27
score: 96.2
NoneNo IPR availablePANTHERPTHR23138RAN BINDING PROTEINcoord: 490..897
NoneNo IPR availablePANTHERPTHR23138:SF141NUCLEAR PORE COMPLEX PROTEIN NUP50coord: 490..897
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 810..919

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:64757..71445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21005.1mRNA_F-serratus_M_contig97.21005.1Fucus serratus malemRNAF-serratus_M_contig97 64707..72212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig97.21005.1 ID=prot_F-serratus_M_contig97.21005.1|Name=mRNA_F-serratus_M_contig97.21005.1|organism=Fucus serratus male|type=polypeptide|length=931bp
MPKRVIADDADGSIDPAEVIAGRRHAKVSLRFRPKSLPASVQAPSPAPSS
HARVQFNSTRPAVEEKNGASGEASATKIFTFSQVLSPSSATNSLESEGKR
RKSVSPAPATAKWPSTFSFPSMVPAPAPVTTPAPAERPPGFYFPRTAPAP
APAASTGFSFPSMVPAPAPVKESSIVETEVKPTSTSLPVAANSRATGEVS
VGNMNAFFKPTAPSSDFGSFSTGSERRSIAVPADSVPSTINRVSAALAPP
ALLQTSSLSTEISPIAVGFAVDVNRRTSNEASAASKSSLSLGDSPWTVSK
FSTAENNRVNSSVPGGGAPSSTGFFSPPAALKRSEMKPLLEAPSPSSQPS
AVHHTETKTKSTVAGFAVDVRASNEASAANKNALSLRDSSWIVSKSSTAE
NNRVNASVPGGSVPSSTGFSSPPAALKRSEMKPMLEAPSPSSQPSAVHHT
ASSPIIESANVANNSTSVETNTLPSAPFGDGLTAIRGMRLNKRIMSWISH
QVDTAPECRLDTGLLDYVVQSADIRIQVAFSKADMVSKVGTAFKHASPTA
ALTYPRSSPPKPTPALPVSSAAVAQATPLSIEAAPTLAPKLAVAPTGSAT
AGFHFSAPSTLPTPSGSSTLFSSRAPKDPSEKQAPAPAAVTTLPRAARGT
LFPSKAPQAPSGEEAASPSVTSTLAPAPFGKLFSSKASAPALNPTPTPAS
SAMPGFFHTPSTLPPAPPGEKFSFKLPSAPAFISSSAAPAVTALAKSSSS
SSPSLSFKFEAGLPSSSFPSSFTGFKVPGGVAAPPLFAGGTAGGAAGGAA
DDEEAEMPKDDPAQLERAPGEENETVVRNFRAKLFIFKNDEKTWGDLGVG
ILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKVTKTKNSISFMANMA
EGGPKHVMLKVTANEIQDLHNTVLALLPTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf