prot_F-serratus_M_contig97.21005.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig97.21005.1
Unique Nameprot_F-serratus_M_contig97.21005.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length931
Homology
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: A0A6A3NLC5_9STRA (RanBD1 domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NLC5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.120e-7
Identity = 37/123 (30.08%), Postives = 67/123 (54.47%), Query Frame = 0
Query:  801 DDEEAEMPKDDPAQLERAPGEENETVVRNFRAKLFIFKNDEKTWGDLGVGILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKV----TKTKNSISFMANMAEGGP-KHVMLKVTANEIQD 918
            D++E  + +++   + +A   +++      +AK+F FK DEK W D G   ++++  K   + R ++RN++GK++LN+  YKGM V     K K +   +A   EGG     +LKV A  + +
Sbjct:  325 DEDEENIGREEATVIIKADSPDDDCTFEADKAKIFEFKKDEKRWADKGTHPIKVLVSKNTTSARILVRNEIGKIVLNSALYKGMAVRPHEAKGKKTGVTLALQVEGGELTQFLLKVNAARVDE 447          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: W2KID0_PHYPR (RanBD1 domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2KID0_PHYPR)

HSP 1 Score: 65.5 bits (158), Expect = 3.000e-7
Identity = 37/123 (30.08%), Postives = 68/123 (55.28%), Query Frame = 0
Query:  802 DEEAEMPKDDPAQLERAPGEENETVVRNFRAKLFIFKNDEKTWGDLGVGILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKV----TKTKNSISFMANMAEGGPK-HVMLKVTANEIQDL 919
            ++E  + +++   + +A   +++      +AK+F FK DEK W D GV  L+++  +   + R ++RN++GK++LN+  YKGM +     K K +   +A   EGG     +LKV A  + +L
Sbjct:  352 EDEENIGREEATVIIKADSPDDDCTFEADKAKIFEFKKDEKRWADKGVHPLKVLVSQETKSARILVRNEIGKIVLNSALYKGMAIRPHEAKGKKTGVTLALQVEGGEMTQFLLKVNAARVDEL 474          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: A0A7S3K510_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K510_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.590e-7
Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = 0
Query:  803 EEAEMPKDDPAQLERAP-GEENETVVRNFRAKLFIFKND--EKTWGDLGVGILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKVTKTKNSISFMA 897
            E+ +MPK+ P+Q+ RA  G+ENE     F ++  I + D   ++W DLG G  RLM+HK+   +R I+RND+GKV+LN      M  T+ K  ++F A
Sbjct:  246 EDEDMPKEAPSQVLRADDGDENEL----FESRAGIRRLDLATRSWKDLGKGTARLMQHKSTQAKRMIVRNDVGKVVLNFKIDPKMIFTQKKRGLAFQA 339          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: A0A3M6VHV7_9STRA (RanBD1 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHV7_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 5.570e-7
Identity = 36/122 (29.51%), Postives = 66/122 (54.10%), Query Frame = 0
Query:  801 DDEEAEMPKDDPAQLERAPGEENETVVRNFRAKLFIFKNDEKTWGDLGVGILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKV----TKTKNSISFMANMAEGGPKHVMLKVTANEIQD 918
            D +E  + +++   + +A   +++      +AK+F FK DEK W D GV  L+++  K   + R ++RN++GKV+LN+  YKGM +    TK K +   +A   +      ++KV A  + +
Sbjct:  337 DQDEENIGREEATVIIKADSSDDDCTFEADKAKVFEFKKDEKRWADKGVHPLKVLVSKDTKSGRILVRNEIGKVVLNSALYKGMAIRPQETKGKKTGVTLALQMDNELTQFLIKVNATRVDE 458          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: A0A8J2SJ80_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ80_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.040e-6
Identity = 39/111 (35.14%), Postives = 62/111 (55.86%), Query Frame = 0
Query:  803 EEAEMPKDDPAQLERAPGEENETVVRNFRAKLFIF---KNDEKTWGDLGVGILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKVTKTKNSISFMANMAEGGPKHVMLK 910
            E+  MPK++   + +A  + +ET     R  L  +   + ++  W DLG G LR+  HKT G  R ++RND+GKV+LN    + M + KTK  ++  A  A+G PK  +L+
Sbjct:  309 EDDAMPKEERVAVAKAD-DGDETTAFESRCALRRYDKPEGEKPQWRDLGKGQLRITRHKTTGAARVVVRNDVGKVVLNFALSEKMSLVKTKAGVAVTAATADG-PKQYLLR 417          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: G4ZUH0_PHYSP (RanBD1 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZUH0_PHYSP)

HSP 1 Score: 63.5 bits (153), Expect = 1.150e-6
Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 0
Query:  831 RAKLFIFKNDEKTWGDLGVGILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKV----TKTKNSISFMANMAEGGP-KHVMLKVTANEIQD 918
            +A++F FK DEK W D GV  L+++  K   + R ++RN++GK++LN+  YKGM V     K K +   +A   EGG     +LKV A  + +
Sbjct:  361 KARIFEFKKDEKRWADKGVHPLKVLVSKDTKSARILVRNEIGKIVLNSALYKGMAVRPHEAKGKKTGVTLALQVEGGELTQFLLKVNAARVDE 453          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: A0A2C5X5D4_9PEZI (Nucleoporin NUP152 n=2 Tax=Ceratocystis TaxID=5157 RepID=A0A2C5X5D4_9PEZI)

HSP 1 Score: 63.9 bits (154), Expect = 1.520e-6
Identity = 38/104 (36.54%), Postives = 52/104 (50.00%), Query Frame = 0
Query:  803 EEAEMPKDDPAQLERAPGEENETVVRNFRAKLFIFKNDEKT---WGDLGVGILRLMEHKTDGTRRFILRND-MGKVLLNAGFYKGMKVTKTKNSISFMANMAEG 902
            ++AE P++     E  PGEE E VV   RAK+ +F  DE     W   GVG LR+++HK  GT R +LR +  G V  N     G K   T  ++  +   A G
Sbjct: 1036 DDAEAPQEQINLTEGGPGEEEEEVVYEVRAKMLLFVKDEDAKSPWSTQGVGPLRVLKHKVKGTVRMLLRREPSGHVAFNRALLSGSKYEATGKTVKLITTSATG 1139          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: A0A8K1FQF2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQF2_PYTOL)

HSP 1 Score: 62.8 bits (151), Expect = 2.440e-6
Identity = 34/127 (26.77%), Postives = 72/127 (56.69%), Query Frame = 0
Query:  801 DDEEAEMPKDDPAQLERAPGEENETVVRNFRAKLFIFKNDEKTWGDLGVGILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGM--KVTKTKNSIS--FMANMAEGGPKHVMLKVTANEIQDLHNTV 923
            +++E  + +++   + ++   +++ V    +AK+F FK DEK W D G   L+++ +K+    R ++RN++GK++LN+  YKG+  KV +TK   +   ++   E      +LKV+ +++    + V
Sbjct:  440 EEDEENIGREEATVILKSDNPDDDCVFDADKAKIFEFKKDEKRWADKGTHPLKVLVNKSTKNARILVRNEIGKIVLNSSLYKGLTTKVNETKGKKTGLILSLQIEDTMTQFLLKVSTDKVDAFKDAV 566          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: UPI00044184A0 (hypothetical protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI00044184A0)

HSP 1 Score: 62.8 bits (151), Expect = 2.620e-6
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0
Query:  820 GEENETVVRNFRAKLFIF--KNDEKTWGDLGVGILRLMEHKTDGTRRFILRNDM-GKVLLNAGFYKGMKVT 887
            GEE+E      ++KL+ F  + +E +W D+GVGILRL +HK  G RR ++RN   GKVL+N   + G+K T
Sbjct:  507 GEEDEETTHAIKSKLYKFVKQEEESSWTDMGVGILRLKKHKETGVRRVLMRNSSTGKVLVNFKLHSGLKPT 577          
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Match: D0NC13_PHYIT (RanBD1 domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NC13_PHYIT)

HSP 1 Score: 63.2 bits (152), Expect = 2.820e-6
Identity = 28/86 (32.56%), Postives = 53/86 (61.63%), Query Frame = 0
Query:  801 DDEEAEMPKDDPAQLERAPGEENETVVRNFRAKLFIFKNDEKTWGDLGVGILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKV 886
            D++E  + +++   + +A   +++      +AK+F+ K DEK W D GV  L+++  K   + R ++RN++GK++LN+  YKGM V
Sbjct:  367 DEDEENVGREEATVIIKADSPDDDCTFEAAKAKIFVLKKDEKRWADKGVHPLKVLVSKETKSARILVRNEIGKIVLNSALYKGMPV 452          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3NLC5_9STRA2.120e-730.08RanBD1 domain-containing protein n=6 Tax=Phytophth... [more]
W2KID0_PHYPR3.000e-730.08RanBD1 domain-containing protein n=8 Tax=Phytophth... [more]
A0A7S3K510_9STRA4.590e-740.82Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A3M6VHV7_9STRA5.570e-729.51RanBD1 domain-containing protein n=2 Tax=Peronospo... [more]
A0A8J2SJ80_9STRA1.040e-635.14Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
G4ZUH0_PHYSP1.150e-637.63RanBD1 domain-containing protein n=1 Tax=Phytophth... [more]
A0A2C5X5D4_9PEZI1.520e-636.54Nucleoporin NUP152 n=2 Tax=Ceratocystis TaxID=5157... [more]
A0A8K1FQF2_PYTOL2.440e-626.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI00044184A02.620e-645.07hypothetical protein n=1 Tax=Punctularia strigosoz... [more]
D0NC13_PHYIT2.820e-632.56RanBD1 domain-containing protein n=2 Tax=Phytophth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000156Ran binding domainSMARTSM00160ranbd_3coord: 809..926
e-value: 6.0E-9
score: 39.2
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 820..910
e-value: 5.1E-13
score: 49.3
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 812..892
score: 14.096
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 723..928
e-value: 8.8E-27
score: 96.2
NoneNo IPR availablePANTHERPTHR23138RAN BINDING PROTEINcoord: 490..897
NoneNo IPR availablePANTHERPTHR23138:SF141NUCLEAR PORE COMPLEX PROTEIN NUP50coord: 490..897
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 810..919

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:64757..71445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21005.1mRNA_F-serratus_M_contig97.21005.1Fucus serratus malemRNAF-serratus_M_contig97 64707..72212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig97.21005.1 ID=prot_F-serratus_M_contig97.21005.1|Name=mRNA_F-serratus_M_contig97.21005.1|organism=Fucus serratus male|type=polypeptide|length=931bp
MPKRVIADDADGSIDPAEVIAGRRHAKVSLRFRPKSLPASVQAPSPAPSS
HARVQFNSTRPAVEEKNGASGEASATKIFTFSQVLSPSSATNSLESEGKR
RKSVSPAPATAKWPSTFSFPSMVPAPAPVTTPAPAERPPGFYFPRTAPAP
APAASTGFSFPSMVPAPAPVKESSIVETEVKPTSTSLPVAANSRATGEVS
VGNMNAFFKPTAPSSDFGSFSTGSERRSIAVPADSVPSTINRVSAALAPP
ALLQTSSLSTEISPIAVGFAVDVNRRTSNEASAASKSSLSLGDSPWTVSK
FSTAENNRVNSSVPGGGAPSSTGFFSPPAALKRSEMKPLLEAPSPSSQPS
AVHHTETKTKSTVAGFAVDVRASNEASAANKNALSLRDSSWIVSKSSTAE
NNRVNASVPGGSVPSSTGFSSPPAALKRSEMKPMLEAPSPSSQPSAVHHT
ASSPIIESANVANNSTSVETNTLPSAPFGDGLTAIRGMRLNKRIMSWISH
QVDTAPECRLDTGLLDYVVQSADIRIQVAFSKADMVSKVGTAFKHASPTA
ALTYPRSSPPKPTPALPVSSAAVAQATPLSIEAAPTLAPKLAVAPTGSAT
AGFHFSAPSTLPTPSGSSTLFSSRAPKDPSEKQAPAPAAVTTLPRAARGT
LFPSKAPQAPSGEEAASPSVTSTLAPAPFGKLFSSKASAPALNPTPTPAS
SAMPGFFHTPSTLPPAPPGEKFSFKLPSAPAFISSSAAPAVTALAKSSSS
SSPSLSFKFEAGLPSSSFPSSFTGFKVPGGVAAPPLFAGGTAGGAAGGAA
DDEEAEMPKDDPAQLERAPGEENETVVRNFRAKLFIFKNDEKTWGDLGVG
ILRLMEHKTDGTRRFILRNDMGKVLLNAGFYKGMKVTKTKNSISFMANMA
EGGPKHVMLKVTANEIQDLHNTVLALLPTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf