prot_F-serratus_M_contig97.21002.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig97.21002.1
Unique Nameprot_F-serratus_M_contig97.21002.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length559
Homology
BLAST of mRNA_F-serratus_M_contig97.21002.1 vs. uniprot
Match: D7G6B8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B8_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 1.860e-68
Identity = 187/446 (41.93%), Postives = 231/446 (51.79%), Query Frame = 0
Query:   86 DHTLPSGVAPVDVFIISRLNDSSSYFFTWFCKRYRIRIGA-RDTGGNEQNQPCPICLDACTKPIELQCGHAFCRSCLATSAANNMTACALCRREQVINPELLRARFDEQRMLNLAQRLALPPP-VRARTTSVKAPKEDPASASNGTNLESESKSSRVEDGAAAAVPLLNVESMKTRGHLLFGPWGDVGAMSIDELRCRWKFSGLHSSTSPSASTVGAAPLTELGRSWLELQRMVRASSASIAFTEASSGSDEGGTSLELYHKDQGRSGISDFFGDDERRESEIKLGGCDPSEAPGSPCAGG-----------SSLGVISDRWRELTRRSSDSNAVENTAP--DLDYGRWYPSSSRKASMHAL----VDPIQLHATHGTPSFSEESLAWHSRFDATESAPVAYVNDVGSLSSTRLRKRWQQAHECTSGGGDIGGAEVRELSARYATA 512
            D  L +G+AP DVFI+SRLND++SYFFTWFCK+YRI+IG  R  GG E+   CPICLD+CTK IELQCGH+FCRSCL  SAANNMT+CALCRREQ I+PE LRARFDEQRMLNLAQRLA+PPP VR+R T+  A      SAS G     E K  RV  G         V +  T+  +LFG  GDVGAMS D+LR RW           ++ST GAA  +EL  SW E     R+ S     +E     D  GTS ++ H        +D        +      G  P  +P S CAGG           SSL +    +      S+     ENT P    D G    +  RK    A+    V  + +    G       +LA   R  + +  P    +DVG   +  L KRW +A E     GD+G   V EL+ R   A
Sbjct:    9 DGALRTGIAPADVFILSRLNDTTSYFFTWFCKKYRIQIGPPRGLGGKEEKTRCPICLDSCTKSIELQCGHSFCRSCLIQSAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQRLAIPPPPVRSRPTATGAA----MSASEGA---CEEKEVRVRVGV--------VPTSTTQREVLFGLGGDVGAMSSDDLRRRWSCG-----VQTASSTAGAASSSELRSSWRESHD--RSRSPMPIHSEG----DLFGTSCQVLHG-------ADSLSCSGHADIGSHFTGASPRRSPDSQCAGGGRVNSMCLERHSSLRIPPSNFGIDASASALPARGENTTPFETSDVGGLDAACLRKRRHEAMEFGDVGDMPVSELAG-----RLTLATDLRTCSEDVTPFE-TSDVGGSDAACLGKRWHEAMEI----GDVGDQRVNELTGRLTLA 411          
BLAST of mRNA_F-serratus_M_contig97.21002.1 vs. uniprot
Match: A0A6H5JF26_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF26_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 1.470e-64
Identity = 182/443 (41.08%), Postives = 230/443 (51.92%), Query Frame = 0
Query:   86 DHTLPSGVAPVDVFIISRLNDSSSYFFTWFCKRYRIRIGA-RDTGGNEQNQPCPICLDACTKPIELQCGHAFCRSCLATSAANNMTACALCRREQVINPELLRARFDEQRMLNLAQRLA-LPPPVRARTTSVKAPKEDPASASNGTNLESESKSSRVEDGAAAAVPLLNVESMKTRGHLLF-GPWGDVGAMSIDELRCRWKFSGLHSSTSPSASTVGAAPLTELGRSWLELQRMVRASSASIAFTEASSGSDEGGTSLELYHKDQGRSGISDFFGDDERRESEIKLGGCDPSEAPGSPCAGG-----------SSLGVISDRWRELTRRSSDSNAVENTAP--DLDYGRWYPSSSRKASMHALV--DPIQLHATHGTPSFSEESLAWHSRFDATESAPVAYVNDVGSLSSTRLRKRWQQAHECTSGGGDIGGAEVRELSARYA 510
            D TL +G+AP DVFI+SRLND++SYFF WFCK+YRI+IG  R  GG E+N  CPICLD+CTK IELQCGH+FCRSCL  SAANNMT+CALCRREQ I+PE LRARFDEQRMLNLAQRLA LPPP+R+R ++  A      SAS G     E K  RV          + V    T G  +F G  GDVGAMS D+LR RW   G+H+++    +T GAA  +EL  SW E     R      +     S  +  GTS ++ H        +D        +      G  P  +P S CAG            SS  + S  + +    S+      NT P    D G    +  RK    A+   D   +  +    S +   LA   R  + +  P     DVG   +  L KRW +A E     GD+G   V EL+ R +
Sbjct:    9 DGTLRAGIAPADVFILSRLNDTTSYFFAWFCKKYRIQIGPPRGLGGKEENTRCPICLDSCTKSIELQCGHSFCRSCLIRSAANNMTSCALCRREQEIDPEQLRARFDEQRMLNLAQRLAILPPPLRSRPSATSAA----MSASEGAY---EEKDVRVR---------VKVVPTSTTGREVFVGLGGDVGAMSSDDLRRRWSC-GVHTAS----ATAGAASSSELRSSWRESHDRSR------SLMPMHSEGELCGTSCQVLHG-------ADSVSCSGHADIGSHFTGASPRRSPDSQCAGRGRVDSMCLERHSSPRIPSSNFGDDASASALPARGGNTTPFETSDVGGLDAACLRKRWHEAMEFGDVGDMPVSELAESLT---LATDLRTCSEDMTPFE-TRDVGGSDAAFLGKRWHEAIET----GDVGDMPVSELAGRLS 409          
BLAST of mRNA_F-serratus_M_contig97.21002.1 vs. uniprot
Match: A0A836CQW4_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQW4_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.170e-32
Identity = 66/114 (57.89%), Postives = 83/114 (72.81%), Query Frame = 0
Query:   89 LPSGVAPVDVFIISRLNDSSSYFFTWFCKRYRIRIGARDTGGNEQNQPCPICLDACTKPIELQCGHAFCRSCLATSAANNMTACALCRREQVINPELLRARFDEQRMLNLAQRL 202
            +P G   +D FI++RLND +SYF TWFCK +R+R+       N     CPICLD  T  I+LQCGHAFCRSCLA SAA N T CALCRREQ+++P+ LR +FD++RM NLA+RL
Sbjct:  204 MPKGEGALDNFIVARLNDETSYFMTWFCKHFRLRL-------NTAPSSCPICLDTVTNSIQLQCGHAFCRSCLAASAACNFTTCALCRREQILHPDELRQQFDQRRMANLARRL 310          
BLAST of mRNA_F-serratus_M_contig97.21002.1 vs. uniprot
Match: A0A7S3XVA3_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA3_HETAK)

HSP 1 Score: 117 bits (292), Expect = 5.350e-24
Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 0
Query:   97 DVFIISRLNDSSSYFFTWFCKRYRIRIGARDTGGNEQNQPCPICLDACTKPIELQCGHAFCRSCLATSAANNMTACALCRREQVINPELLRARFDEQRMLNLAQR 201
            DVF++SR+ND SSYF+TWFCKR+  ++ A  T      + CPICL++    IELQCGH+FCR CL  SA   ++ C LCR    +NPE+LR  F++QR+ NL +R
Sbjct:   40 DVFLVSRMNDESSYFYTWFCKRFEFKLKANKT----YKENCPICLESELHSIELQCGHSFCRGCLTHSAEMKISCCPLCRANICLNPEVLRKNFEDQRIRNLMRR 140          
BLAST of mRNA_F-serratus_M_contig97.21002.1 vs. uniprot
Match: A0A4D9CMH2_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CMH2_9STRA)

HSP 1 Score: 113 bits (282), Expect = 8.030e-23
Identity = 120/444 (27.03%), Postives = 175/444 (39.41%), Query Frame = 0
Query:   97 DVFIISRLNDSSSYFFTWFCKRYRIRIGARDTGGNEQNQPCPICLDACTKPIELQCGHAFCRSCLATSAANNMTACALCRREQVINPELLRARFDEQRMLNLAQRLALPPPVRARTTSV-KAPKEDPASASNGTNLESESKSSRVED--------------GAAAAVPLLNVESMKTRGHLLFGPWGDVGAMSIDELRCRWKFSGLHSSTSPSASTVGAAPLTELGRSWLELQRMVRASSAS-----IAFTEASSGSDEGGTSLELYHKDQGRSGISDFFGD---DERRESEIKLGGCDPSEAPGSPCAGGSSLGVISDRWRELT-RRSSDSNAVENTAPDLDYGRWYPSSSRKASMHALVDPIQLHATHGTPSFSEESLAWHSRFDATESAPVAYVNDVGSLSSTRLRKRWQQ---AHECTSGGGDIGGAEVRELSARYATAM 513
            DVF +SRLND ++YFF W CKRY + + A       +   CPICL+     I+L CGH FCR CL  +A   M++CALCR+   ++P++LR +F  QR  N++ RL        R T V   P  +    +      +  K S V D              G   +V +   +  K RG    GP  D+G +    L  R   S   +  SP    VG +   EL R W  L     A S          TE +      G +       +G+ G +D  G    D  R+ + K GG            GG     ++  WRE   + S++  A +       +    P S    +  A+        +        + L      DAT  A       VG+L+   ++ RW     +   T    D GG +V EL+ R+   M
Sbjct:   69 DVFYLSRLNDPTTYFFQWICKRYGLTVKA-------EPHSCPICLETSENSIQLSCGHTFCRQCLKAAAEQKMSSCALCRKSHTLDPDVLRQQFQTQRFANMSWRLG-----NTRATRVFSKPSWEALFCAGSGGAGNAGKCSDVGDRASSPSCEAGEVPTGGGGSVGVTKGKGGKERGRGYVGP--DIGGLPHRLLMRRAAKSVRRAFVSPDPD-VGGSTRAELQRRWSMLMGGKAAESKQWKGGVAVLTEEAGAESVAGLTRRWGRGREGQGGQADCMGSRWSDLMRQGQGKEGG-----------VGGEDQAALTAWWREARGQESAEVGAAKVPTLAAAWSLLVPDSPGPLAPWAVPTTDCGGLSVAALKARAQRLFLPPVIDATSDA------GVGALAQEEMQARWDACFLSSRATLPCLDAGGRDVAELAHRWGKLM 480          
BLAST of mRNA_F-serratus_M_contig97.21002.1 vs. uniprot
Match: UPI001D168116 (E3 ubiquitin-protein ligase TRIM52-like n=2 Tax=Mauremys mutica TaxID=74926 RepID=UPI001D168116)

HSP 1 Score: 54.3 bits (129), Expect = 9.130e-5
Identity = 26/75 (34.67%), Postives = 43/75 (57.33%), Query Frame = 0
Query:  132 EQNQPCPICLDACTKPIELQCGHAFCRSCLAT--SAANNMTACALCRREQVINPELLRARFDEQRMLNLAQRLAL 204
            ++   CP+CL+  T+P+ L+CGH FCR+C+A     +N   +C  CR  Q +    LR       M+ +A++L+L
Sbjct:   11 QEEATCPVCLEYFTEPVTLECGHNFCRACIAQCWEGSNTAISCPQCR--QTVQQRNLRPNRQLANMVEIAKQLSL 83          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G6B8_ECTSI1.860e-6841.93RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JF26_9PHAE1.470e-6441.08RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CQW4_9STRA5.170e-3257.89RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3XVA3_HETAK5.350e-2450.48Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A4D9CMH2_9STRA8.030e-2327.03RING-type domain-containing protein n=2 Tax=Monodo... [more]
UPI001D1681169.130e-534.67E3 ubiquitin-protein ligase TRIM52-like n=2 Tax=Ma... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 137..175
e-value: 1.4E-7
score: 41.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 137..176
score: 11.53
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 130..220
e-value: 6.2E-13
score: 50.8
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 137..166
e-value: 2.5E-7
score: 30.6
NoneNo IPR availablePANTHERPTHR13417UNCHARACTERIZEDcoord: 129..179
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 133..182
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 152..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:24010..45407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21002.1mRNA_F-serratus_M_contig97.21002.1Fucus serratus malemRNAF-serratus_M_contig97 23234..45489 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig97.21002.1 ID=prot_F-serratus_M_contig97.21002.1|Name=mRNA_F-serratus_M_contig97.21002.1|organism=Fucus serratus male|type=polypeptide|length=559bp
MISDFRACPPPPRGGTRLPGEDTSDMDHDEMCSSLERAGATRRKLCAEPR
RQRSISLDERTTSRNVVNRGEKCSGIPVLRGVPKTDHTLPSGVAPVDVFI
ISRLNDSSSYFFTWFCKRYRIRIGARDTGGNEQNQPCPICLDACTKPIEL
QCGHAFCRSCLATSAANNMTACALCRREQVINPELLRARFDEQRMLNLAQ
RLALPPPVRARTTSVKAPKEDPASASNGTNLESESKSSRVEDGAAAAVPL
LNVESMKTRGHLLFGPWGDVGAMSIDELRCRWKFSGLHSSTSPSASTVGA
APLTELGRSWLELQRMVRASSASIAFTEASSGSDEGGTSLELYHKDQGRS
GISDFFGDDERRESEIKLGGCDPSEAPGSPCAGGSSLGVISDRWRELTRR
SSDSNAVENTAPDLDYGRWYPSSSRKASMHALVDPIQLHATHGTPSFSEE
SLAWHSRFDATESAPVAYVNDVGSLSSTRLRKRWQQAHECTSGGGDIGGA
EVRELSARYATAMGNQGIGALSPTSLKERGKALRSYRNNADIVGKGVGVS
DLPKAGIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
IPR017907Znf_RING_CS