prot_F-serratus_M_contig969.20998.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig969.20998.1
Unique Nameprot_F-serratus_M_contig969.20998.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length173
Homology
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BLAST of mRNA_F-serratus_M_contig969.20998.1 vs. uniprot
Match: A0A2T9YUP5_9FUNG (HECT-type E3 ubiquitin transferase n=2 Tax=Harpellales TaxID=61421 RepID=A0A2T9YUP5_9FUNG)

HSP 1 Score: 54.3 bits (129), Expect = 2.210e-5
Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0 
Query:   59 PLPSGWSEGFTTDGKKYYKNHVAMTTTWDRP 89
            PLPSGW + FT+DG+ YY NH+A TTTWD P
Sbjct:  272 PLPSGWEQRFTSDGRPYYVNHLARTTTWDDP 302
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig969.20998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2T9YUP5_9FUNG2.210e-567.74HECT-type E3 ubiquitin transferase n=2 Tax=Harpell... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 59..91
e-value: 7.6E-9
score: 45.4
IPR001202WW domainPFAMPF00397WWcoord: 60..89
e-value: 3.1E-9
score: 36.8
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 64..89
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 58..91
score: 15.841
NoneNo IPR availableGENE3D2.20.70.10coord: 51..93
e-value: 2.2E-12
score: 48.4
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 55..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig969contigF-serratus_M_contig969:11202..26032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig969.20998.1mRNA_F-serratus_M_contig969.20998.1Fucus serratus malemRNAF-serratus_M_contig969 11202..26039 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig969.20998.1 ID=prot_F-serratus_M_contig969.20998.1|Name=mRNA_F-serratus_M_contig969.20998.1|organism=Fucus serratus male|type=polypeptide|length=173bp
MGDGNKDNEYEAKTSKWDRLTTKEDTASKDALQLDNGSITATTTSLAIST
PMPGQEEPPLPSGWSEGFTTDGKKYYKNHVAMTTTWDRPTAAVDTPPATQ
ATYASAANPAASPLGSRTSSTFSVAVTATEAEQKEDHVSTGWNEGVIVMG
DGNKDNEYEVETSKWDRLTTKED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf