prot_F-serratus_M_contig968.20995.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig968.20995.1
Unique Nameprot_F-serratus_M_contig968.20995.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length330
Homology
BLAST of mRNA_F-serratus_M_contig968.20995.1 vs. uniprot
Match: D8LKD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD3_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 1.300e-23
Identity = 118/368 (32.07%), Postives = 143/368 (38.86%), Query Frame = 0
Query:    7 LSTFSSPQMHNGCRGLFNGAKGWAYIGPSDTIDTKVFP-GTLPLAYI--NERCGASQNSSEATAGVKRD------ESSRRPGRRLIRKINPC----LDTVDLEHLVHGAERSPAVPSTVEFSLYRGGGKEGADGMS-------RAGRPIVLTLHAILAAKTNIPEEILAAXXXXXSPPVRVGEGGGQFLSPAATAKETEEHRAGAD-----------GDLNVTDLAQFPPLMLRSPTAEKS-GLYLSPPVTMVKRP----PAAPRGGEEVGGDDVSSDPVVSCSEALEATLVAEEAQAVGGRVEARAEAVARVGWWLP---------AAGRGSKGGNTECFDVEDPYYARKRVGAFAYRTKPRGRDHK 329
            LS F+S   HNGCR LFNG  GWAY GP+  ID    P GT+   Y    ++ G    ++  +            +++++PG  L RK N       D  DL HLV G             ++  G                 R GRPIVLTL AI              XXXXX  P+                                      G     + AQFPPLMLR  +AEK  GLYL+PP+TMVK+     PA             +    VSCSEA  AT VAE                                 AA R          + EDPYYARKRVGAFA+RTKPRG+ HK
Sbjct:   16 LSAFTSGDAHNGCRALFNGTAGWAYFGPAGEIDEGALPAGTVSYPYNVKGDKSGLFGVTASGSGXXXXXXXXXXXQAAKKPGDDLNRKSNEMRGVYFDAKDLAHLVRGWAGDDGDXXXXXXAVQYGXXXXXXXXXXXXXXXRPRKGRPIVLTLQAIXXXXXXXXXXXXXXXXXXXXXPLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVTAADNNAQFPPLMLRDASAEKGPGLYLAPPITMVKKNGPGHPAEQLAASHEAAAVGTQGCAVSCSEAAAATSVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAADRAKS-----MLEDEDPYYARKRVGAFAHRTKPRGKAHK 378          
BLAST of mRNA_F-serratus_M_contig968.20995.1 vs. uniprot
Match: A0A6H5KU49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU49_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.770e-12
Identity = 79/251 (31.47%), Postives = 95/251 (37.85%), Query Frame = 0
Query:    7 LSTFSSPQMHNGCRGLFNGAKGWAYIGPSDTIDTKVFP-GTLPLAYINERCG-ASQNSSEATAGVKRDESSRRPGRRLIRKINPC----LDTVDLEHLVHG--------AERSPAVPSTVEFSLYRGGGKEGADGMSRAGRPIVLTLHAILAAKTNIPEEILAAXXXXXSPPVRVGEGGGQFLSPAATAKETEEHRAGAD-------------GDLNVTDLAQFPPLMLRSPTAEKS-GLYLSPPVTMVKR 229
            LS F+S   HNGCR LFNG +GWAY GP+  ID    P GT+   Y +   G  +  S     G    +++++PG  L RK N       D  DL HLV G                                    R GRPIVLTL AI              XXXXX                                            G       AQFPPL+LR  +AEK  GLYL+PP+TMVK+
Sbjct:   16 LSAFTSGDAHNGCRALFNGTEGWAYFGPAGEIDEGALPAGTVSYPYKSGMFGMTASGSGSGRDGGGTSQAAKKPGDDLSRKSNEMRGVYFDAKDLAHLVRGWAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPRKGRPIVLTLQAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGVTAADTNAQFPPLVLRDASAEKGPGLYLAPPITMVKK 266          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig968.20995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKD3_ECTSI1.300e-2332.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU49_9PHAE2.770e-1231.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig968contigF-serratus_M_contig968:28087..30018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig968.20995.1mRNA_F-serratus_M_contig968.20995.1Fucus serratus malemRNAF-serratus_M_contig968 18941..30018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig968.20995.1 ID=prot_F-serratus_M_contig968.20995.1|Name=mRNA_F-serratus_M_contig968.20995.1|organism=Fucus serratus male|type=polypeptide|length=330bp
MSGEATLSTFSSPQMHNGCRGLFNGAKGWAYIGPSDTIDTKVFPGTLPLA
YINERCGASQNSSEATAGVKRDESSRRPGRRLIRKINPCLDTVDLEHLVH
GAERSPAVPSTVEFSLYRGGGKEGADGMSRAGRPIVLTLHAILAAKTNIP
EEILAAAAAAASPPVRVGEGGGQFLSPAATAKETEEHRAGADGDLNVTDL
AQFPPLMLRSPTAEKSGLYLSPPVTMVKRPPAAPRGGEEVGGDDVSSDPV
VSCSEALEATLVAEEAQAVGGRVEARAEAVARVGWWLPAAGRGSKGGNTE
CFDVEDPYYARKRVGAFAYRTKPRGRDHK*
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