prot_F-serratus_M_contig966.20984.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig966.20984.1
Unique Nameprot_F-serratus_M_contig966.20984.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length4994
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig966.20984.1 vs. uniprot
Match: D0MTA1_PHYIT (HECT E3 ubiquitin ligase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MTA1_PHYIT)

HSP 1 Score: 63.2 bits (152), Expect = 2.230e-5
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0 
Query: 4072 DEINPLTAHMAEMGFPVHWCERALAETGDDIEAALNWILSNGELLSVEDSLRESIQAQS 4130
            + I+PL   ++EMGFP +WC++ALA   ++++AAL WILSNGE L  ED   E  + ++
Sbjct: 2544 EAISPLLEQLSEMGFPFNWCKKALAANRNNVDAALTWILSNGEALEAEDRRDEEAKLRA 2602
[Close]
BLAST of mRNA_F-serratus_M_contig966.20984.1 vs. uniprot
Match: A0A833TAT2_PHYIN (HECT domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TAT2_PHYIN)

HSP 1 Score: 63.2 bits (152), Expect = 2.230e-5
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0 
Query: 4072 DEINPLTAHMAEMGFPVHWCERALAETGDDIEAALNWILSNGELLSVEDSLRESIQAQS 4130
            + I+PL   ++EMGFP +WC++ALA   ++++AAL WILSNGE L  ED   E  + ++
Sbjct: 2625 EAISPLLEQLSEMGFPFNWCKKALAANRNNVDAALTWILSNGEALEAEDRRDEEAKLRA 2683
[Close]
BLAST of mRNA_F-serratus_M_contig966.20984.1 vs. uniprot
Match: A0A6G0SGL4_9STRA (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6G0SGL4_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.920e-5
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0 
Query: 4072 DEINPLTAHMAEMGFPVHWCERALAETGDDIEAALNWILSNGELLSVED 4120
            + I+PL   ++EMGFP +WC++ALA   ++++AAL WILSNGE L  ED
Sbjct: 2659 EAISPLLEQLSEMGFPFNWCKKALAANRNNVDAALTWILSNGEALEAED 2707
[Close]
BLAST of mRNA_F-serratus_M_contig966.20984.1 vs. uniprot
Match: A0A3M6VMP9_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMP9_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.920e-5
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0 
Query: 4072 DEINPLTAHMAEMGFPVHWCERALAETGDDIEAALNWILSNGELLSVEDSLRESIQAQS 4130
            + I+PL   ++EMGFP +WC++ALA   ++++AAL WILSNGE L  ED   E  + ++
Sbjct: 2651 EAISPLLEQLSEMGFPSNWCKKALAANRNNVDAALTWILSNGEALEAEDRRDEDAKLRA 2709
[Close]
BLAST of mRNA_F-serratus_M_contig966.20984.1 vs. uniprot
Match: A0A6A4FN92_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FN92_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.920e-5
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0 
Query: 4072 DEINPLTAHMAEMGFPVHWCERALAETGDDIEAALNWILSNGELLSVED 4120
            + I+PL   ++EMGFP +WC++ALA   ++++AAL WILSNGE L  ED
Sbjct: 2659 EAISPLLEQLSEMGFPFNWCKKALAANRNNVDAALTWILSNGEALEAED 2707
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig966.20984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D0MTA1_PHYIT2.230e-545.76HECT E3 ubiquitin ligase, putative n=1 Tax=Phytoph... [more]
A0A833TAT2_PHYIN2.230e-545.76HECT domain-containing protein n=1 Tax=Phytophthor... [more]
A0A6G0SGL4_9STRA2.920e-553.06Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A3M6VMP9_9STRA2.920e-545.76Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A6A4FN92_9STRA2.920e-553.06Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3981..4004
NoneNo IPR availableCOILSCoilCoilcoord: 4143..4163
NoneNo IPR availableCOILSCoilCoilcoord: 2491..2514
NoneNo IPR availableGENE3D1.10.8.10coord: 4077..4138
e-value: 7.8E-10
score: 40.6
NoneNo IPR availableGENE3D2.60.120.920coord: 577..697
e-value: 1.0E-6
score: 30.7
IPR010606Mib-herc2PFAMPF06701MIB_HERC2coord: 1810..1892
e-value: 3.5E-9
score: 36.8
IPR010606Mib-herc2PROSITEPS51416MIB_HERC2coord: 1798..1910
score: 15.58
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 4069..4112
score: 11.583
IPR037252Mib/herc2 domain superfamilySUPERFAMILY159034Mib/herc2 domain-likecoord: 1808..1893
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 4079..4118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig966contigF-serratus_M_contig966:124779..151812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig966.20984.1mRNA_F-serratus_M_contig966.20984.1Fucus serratus malemRNAF-serratus_M_contig966 110261..152049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig966.20984.1 ID=prot_F-serratus_M_contig966.20984.1|Name=mRNA_F-serratus_M_contig966.20984.1|organism=Fucus serratus male|type=polypeptide|length=4994bp
MRSPPPGTEGKGDGRGDGTSPMTPQGTGPDAGPEGNSAASKDVEDANGGD
GGGIDQRLFAPVLRAILCGEGDHVLRRSLLCHPFLKISKSDGSSAGNSSG
GAGGSAGVASSKGSGVGSTPSPLGTSRKKGSKAARGGKPKKRDRDKEKGG
REQEDIGQGTEAAGSGAAVDRSPQLPMDVSREMNRLAERASCDGSLQSTL
ILLKALLCALDPAAQLMGTVESPSMRHPPSQQGGRFLGRKQTSTPEGDNA
RAAHSSVTKIALGTAPLRALAGRGLSGWPEVMELLRREKYRERMMALRGR
PSLTICYGKADMRGRLEAKGESSGVVTAVQVKQRRRWYYEVTLVGPSKGT
RVGWALFDGDFSRGMPSQGEEGDRYTAVPHLGNGSDSWGICGYQQGKMYH
QAIRVRAARIEAASKARRDSRKDEEASESGERVGEGKEEGGTKATGQTLG
GEDSDSGDGSGDQGEAGGDNQEEDSADSIFLALGGLFRDTSFAVDQEGED
GGNPIEYAPVTETTPPSSLLSSPAAPSTPWVESAANLPERGGVPPPPPPP
PPPPPPPPLPSSSKRALATVKLPKPHLPRGGDVPLRPWGTGVVIGCLADL
IDTDDDVEGDADGDNSTDCKGTIKLHFFLNGRPVNNNPSVPIFSPTVAEV
TTAAEGKNGNEWALCPAYSCASSSDGVSVNLSETPFQFPPESLLSTHGPY
SEGGGGSGATAAAGTTTAAATTSSGAPATSPSREKRSRYGGSSAGVDRAS
HPVLGRAAERALEAAFGLGQEGSSTPTNPHGGAGGEDVTEGVRSPSTSKA
PSDTGETPTSGGKRGRTKGIPGYVQPVKDAAVSRCVRFDGCGWAVALQPN
LTIQALDVFLVEALIRPAESGGGSRKENDTGAEGASTEAGGEEGEEEGEF
VVFSQGGKCGFYLAVQGTKAVLWLNGPEATGKGTRHVTPDGVLPAPGTWF
KLSASVARDTSPGVDQVIFYVDGAAVYKSSLPSCGGRRAAISQPPPLQQQ
HQQQTRPMLIGARLRGDIIAKPPAKPGDGFDTNGEGKVAAPPETDGAVQH
LPGTATPAPVGDQDSVRGLFRGEIAQVRVWSSPCSEAFLQRLVGRAGVLD
GDATLVFLWKVDEGGGSFLHNSGPLQQPKLVRGAKAATSAAGGGTGMGTE
GHAELVGEWEWVPCFDPDTYEGITYAESATTAGTSGAVAASATAAAANSP
VNLPPSSSSTTPRSGRQGGEAALVPFVVAVASPVMSPAAGPSTGTDTDLT
RSLGWRSVSTAGDEECGDDQREDEDEEDTGGDGKHRGEGGRLLRQSPSCS
TAGDAARVGHATAAAATAAGAGAALRAGAALDEAALDGVTRARKVSAREA
LLGVLGKLFQQCSVYLAPCGGDPLLESLPPVMGRTEARVQVQLQLVRREE
RAIRAVVQPEVRTYLLLRSVLWQLAAIAEGLRPDGDDDASSSATTSTSGG
NIASATVPAGSSKQSPDEGTTNEALGPRDLLIIGLCTLRLLRANLYYLTA
TRISPGTVGLGTTCSGGGHGPSGRRGDSRAGGSGGSGVKDQRSPFASGLL
SLLLDYAGGVLDVFPASAGTAEGCEERAAAAEELREMAALRRAVRYEAAE
IVGRGLYIFLPEPAKKVAFLSALLKLAGGSDGGGGGTGPEHYNNGYGEDE
EDSKDEENLEETKAWDGKRGSTATSTEAAAAMADGLLPADMDEEGCAALL
SGVCNAVCSDPYTLPTFVPASIRPSLTVRDVPSYVSSKVRSAEKAHAQAL
QQRMLKEAAAAVGATSGSSSPGGGGASLTGGSRGRVSGSDDGDGLGLWKT
GPEVGLPRPGDIVVRGPDWAWSGQDGDAGGRGLVVALATWGREVRSVGVG
NRGASRGALARARRYRGDGGRNAVRVMWQKGAINIYRWGASDLSESDGKP
CYDLRVLRPPSAVHDESAAEEDTGTGGSSSGSSNSIGSLGGGGGNGSATS
KGTTSGGKSQGQVHVAGKGRAATRRELRWTMEEVEAELLPERVMGKGGDR
GGVGTSGTAGGQETLTAREVLRFIKNNAPQEWREPRRITGAENAMVKLHQ
PEAVVRFYREFVESFGSSFTPPPTHSNVKPSLMNAEDLLQEQQARNLSDL
LLLSLRVTHHLETGGGNKRLLHRRGRRFSVSSQAGSDAFDAGRSTRGAET
SKRRSREKEEEQEEGEPERDAGTEGQREGESEVDAEVEHAVYLPETLEAT
VFLLARLQAVMTRAWDPAEVYHAAARLSTVDSNGHVATAAEVVAGAGAFG
RGSVSGGYDSNGTLDNDEGDEDADALADTFVGFTKNTRRWDWMRCCHAPV
NPALLNGGRGRGGGSRGSGSNSQPIVAPVAIDPDFCHRTLRPGKPGPEGG
PSPVASAALAAATAAGPYRSLNAFMGGMGNGMISGIGGMGAGEGFAGQAL
PLGYPNPLLMEHARVALEMASVVLREAVCGGAGVAGEDRDGDCVGVVTRT
MAALEHPLLKDGSGLLSPLVASLAQWHLIDDPEDSLGSTMIDGLKTTLRE
VDALKRELAQETLTDEAKQCLASLNRLQVVLACLAGKLLGALISGGIGSL
DGGECPNDVRDAVDAEVKLRLGGRASPVAASAGVSASGRKLSASTSKPIA
GVVPVAPAAGASTATAAGVAGEGGKVTDASAEVDWLQSPLLKNGLVFVPP
TADAAEAAPGGGVYIPSLGHGIVDDGSGSMGPAGAGVIETFLRDLVEQGP
ESPAQALGLWVSKHVGENPVLARMGGPLVARGVRGAVAAMLWHSGYAAAA
QRMAAALVTTPTSARARVDSQVPPFFLLETWRKAAGLKSWAKSRRDRGTP
YEATAADLTRHCRFLLSLHPATTDRPTRHTERLSLVMGFLKGCVDLCRLR
AAQLAADARARRRAAGLTVLRSLLGTTGREGSSGVKAALLLYVPPALRGV
LHGLAAFGPDAIALQMARDAAARAARAGGGNGIGLLAGHYVGSRSLPGGH
YLAGLAGCPKSTAQEVRGAFEKLYSFLAGELETAAQQGDTPLQFALMDAW
GIEVHEEDHDLLARVRIFNILQEILDTTIKHSPGIVADMTVERRPASSGR
AVKVATAAATLARSAQRSMDGRGGDADSRAGTHLASNESTPAEGADREAD
GGGDETAAAVAAAAEELAAAESHSLTQGAMKLVYLLAIQVATTGQEAGGS
GSGMTTSELSTPGHARGPQLVRARSGPATLSHAVFEMLFNELKTSTMADF
GGEAESGGVGSHEREDEERMVFERLADMQEDLACLTLSRELQVLVSEVTM
LLLCVSSTDSCRSLLSQPRWIAVLLGLLRLGPPYAQRRALRLIRRLLPHC
DPESLADGGGGGDDDSSGDDDALGQPVIDGTDWSIVSIVKELGAGAAVAS
VAAGAQDGETGGGGGDGAGGDGIVSGPPIVRVTSLSNSVQANLIPARSLL
CFFLDAIGGAYQTTPRPDWLGDAEGIGNVAAIGGGDISQSYDGRAVGATL
RDLRSWHRGQAGSSTSGREQGRTAWTFSQLEAPLVCESVALLRTLLQTPS
WGAVTATLLQDALQRGNSCLRMLAREAADIAEAAAAAAAASIPPTPAEGI
GAEVWAVAGPRCGDERSSDVAATSSGVAGTASPPLGSSETTGDTIAAVAE
APHSSPVVPSGATAGPHRVILTGERQPGRTTPIPAVPAASVGPSADGTLL
RTLGALSVLGGHVDVLYPGASAEIMPLDSGAASRGASGGSRGAVRGSQVN
SGGWGVRMGRSVFGLSGLERAAGVAGAGVNGRGGGMGGDGTIPGSVSSTA
AASAAGGRPCDGGGSCGTGGSSGGGSRGAGSARPVAGSGIGGDDARKPRV
VPLDCLQAVPNVPVLPGILPPDLAPRVLETLTLWCLDKSLSAAFSERLSP
TIVPLMPPLAAGRNSTSRQANGDEGKEREEGLSGVLSTTVLDRHLLLGLV
RCQAAKAAQTLLLHPPTASDFIKAASAPAPGRKAKGGAGAVLLEVASGAS
ASAGLGDIGAMEELLAMLMVHWQFVVLDGRSKKVQEARDRVRRKADAAKQ
AELSVVEAESRAAATNGTRGLAQEDGEQQRGAAGSSGGMMAGDEGVHGSS
SDGGSGGRSGEGEEEQQQEVNDEINPLTAHMAEMGFPVHWCERALAETGD
DIEAALNWILSNGELLSVEDSLRESIQAQSQAVAEVAAAEMARAEAAAAV
VAAEAEVAAATAEAAGALGGAGDESGGSRSGGKQTPDGEGGETQKETGST
KQESLVFFNTVKHAEDSGEVVVSSDQGPEPSWPQVFHCDLSEEVELPLLA
EPRLGAEQVGGLYAGEEVTAVGQQGDWLHLRLYELDEEEEEDEEEDRDED
HNEDDDDDDDDEHEISSRDRHNGAGVDRDGGRRSSGRGDAAAERGQLDGE
IYVCGRCNAEHLKEPLVWALRRTAVREFLRPGPCPDSPRMGWVDSLEMER
LPAPTDQVFPRRHGGGDGCVRRCADPQSAEVTVVPEGTELVAAEEVHDSN
GGVWIRLLAPVEGWIGRRANSLMAVTRDSPTLGGGGGGHSYSGLDRDEGE
SGEAAEVAMARELEDCMEEEAGTDMYRRDDRLFGSRQGWSLPAGGDSGLK
VACGRSVSGGVVGGRADSRVPGERRARVVGHASVSGCWANSSSMSISATK
EKLAGTAATLAVLHCRKILLTMLLQCHKEVTQTTVDGRAAADASFSQRVA
ALVGARDAPATPRVTAPLAKTGVDATPLRASPAALRTRAASRQFSSFLQL
VLFRGWRPGWWPPTSVAGVDADWSEFEEGDIAHGEKKNAEERPTSETGGS
AVDMDELACLDDKEPMSECFRSLPVVLTPLVLSLLRAAAAQRTILAHSGY
ETVAGLAAGKAGVGVASPGGTRSQPSQRLLSFGAHVEEALLQSVASQLRQ
ATRIGHRDHAMASSPDASAMSDGDCLRQPRLRYVTWASRVVQAGSGSPAV
PCRVFHAWAAGLRSPSLPVKQQVCAELSRLLDDAVQAVDRGHQTVRPPVG
EQASAQEDSADKTAIAMAAMRRLKRCVELLPLKGFVRWRNGAC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010606Mib_Herc2
IPR015940UBA
IPR037252Mib_Herc2_sf
IPR009060UBA-like_sf