prot_F-serratus_M_contig966.20981.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig966.20981.1
Unique Nameprot_F-serratus_M_contig966.20981.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length356
Homology
BLAST of mRNA_F-serratus_M_contig966.20981.1 vs. uniprot
Match: A0A3Q3M3L7_9TELE (Zinc finger, CCHC domain containing 9 n=11 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q3M3L7_9TELE)

HSP 1 Score: 89.0 bits (219), Expect = 1.310e-16
Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 0
Query:  124 KTRCLGCRAWGHVVAKCPDA----KANTGICFNCGSSEHALRACP-KPKQKDGSLPHAKCFVCQEKGHISAHCKYNANGIYPKGGSCKGCGS 210
            K  C  CR  GH +A CP+A    +   GIC+ CGS+EH +  C  K     G  P+AKCF+C++ GH+S  C  N  G+Y +GG C+ CGS
Sbjct:  132 KMLCFNCRKPGHGLADCPEADRDEEMGRGICYRCGSTEHEIHKCKAKVDPGLGDYPYAKCFICEQTGHLSRSCPDNPKGLYAQGGCCRVCGS 223          
BLAST of mRNA_F-serratus_M_contig966.20981.1 vs. uniprot
Match: A0A2A9MHL6_9APIC (Zinc knuckle domain-containing protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MHL6_9APIC)

HSP 1 Score: 90.9 bits (224), Expect = 1.680e-16
Identity = 46/124 (37.10%), Postives = 64/124 (51.61%), Query Frame = 0
Query:  127 CLGCRAWGHVVAKCP-------------------DAKAN---TGICFNCGSSEHALRACPKPKQKDGSLPHAKCFVCQEKGHISAHCKYNANGIYPKGGSCKGCGSRHHLSKNCPDNPRANEEV 228
            CL CR  GHV+  CP                   +AKA    +G+CFNCG+++H L+ C K ++ DGSLP A          +SA C  +  G YPKGG C+ CGS +HL   CP+  +  +E+
Sbjct:  272 CLRCREKGHVLENCPLATATGPNSASPDAAAKEGEAKARPMMSGVCFNCGATDHTLKNCKKKRKPDGSLPFALXXXXXXXXXLSAGCPQSTTGKYPKGGCCRTCGSIYHLQIECPEFQKQQKEL 395          
BLAST of mRNA_F-serratus_M_contig966.20981.1 vs. uniprot
Match: A0A6P5WDE5_9EIME (zinc finger CCHC domain-containing protein 9 n=2 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A6P5WDE5_9EIME)

HSP 1 Score: 89.0 bits (219), Expect = 4.760e-16
Identity = 46/119 (38.66%), Postives = 61/119 (51.26%), Query Frame = 0
Query:  108 AYEERERRNQAGSGAVKTRCLGCRAWGHVVAKC--------PDAKANTGICFNCGSSEHALRACPKPKQKDGSLPHAKCFVCQEKGHISAHCKYNANGIYPKGGSCKGCGSRHHLSKNC 218
            A+EE  R N+      K  CL CR  GH++ +C         +  A +GICFNCGS  H L+ C KP+ +DG+LP             S+ C  +  G YPKGG C+ CGS +HL   C
Sbjct:  217 AHEEDPRSNKRS----KKICLRCRKRGHLLHECRQGVSQAQAEGAATSGICFNCGSHNHTLKNCKKPRAEDGALPFXXXXXXXXXXXXSSQCPQSKTGKYPKGGCCRTCGSIYHLQAEC 331          
BLAST of mRNA_F-serratus_M_contig966.20981.1 vs. uniprot
Match: A0A6S7GHJ9_PARCT (Zinc finger CCHC domain-containing 9 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GHJ9_PARCT)

HSP 1 Score: 85.9 bits (211), Expect = 8.410e-16
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0
Query:  127 CLGCRAWGHVVAKCPDAK-ANTGICFNCGSSEHALRACPK--PKQKDGSLPHAKCFVCQEKGHISAHCKYNANGIYPKGGSCK 206
            C  CR  GH  ++CP+      G CF CGSS+H  + C     ++  G+ P AKCF+CQE GH++  C  N  G+YP+GG CK
Sbjct:   85 CFVCRERGHQASECPNKNDMKIGSCFKCGSSDHTTKKCKANIDEKSAGAFPFAKCFICQEMGHLARSCPENPRGLYPEGGGCK 167          
BLAST of mRNA_F-serratus_M_contig966.20981.1 vs. uniprot
Match: A0A0M9VQ41_9BASI (Zinc knuckle family protein n=1 Tax=Malassezia pachydermatis TaxID=77020 RepID=A0A0M9VQ41_9BASI)

HSP 1 Score: 87.0 bits (214), Expect = 9.180e-16
Identity = 50/124 (40.32%), Postives = 64/124 (51.61%), Query Frame = 0
Query:   91 SKPRMTKEERRAKYTQKAYEERERRNQAGSGAVKTRCLGCRAWGHVVAKCP-------DAKANTGICFNCGSSEHALRACPKPKQKD-GSLPHAKCFVCQEKGHISAHCKYN-ANGIYPKGGSC 205
            S+PR+  ++R A    K  EER    QAG      RC  CR   H    CP         K   G+CF CGS+EH L  C KP+ KD   LP A C++C +KGH+++ C  N   G+YP GG C
Sbjct:  111 SRPRLEPDQRTAFRRAKRAEER----QAGM-----RCYVCRELSHSAKDCPHNIGAGAQGKDTVGLCFRCGSTEHTLSQCKKPRTKDHDDLPFATCYICTQKGHLASKCPQNQGRGVYPDGGQC 225          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig966.20981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3Q3M3L7_9TELE1.310e-1643.48Zinc finger, CCHC domain containing 9 n=11 Tax=Per... [more]
A0A2A9MHL6_9APIC1.680e-1637.10Zinc knuckle domain-containing protein n=1 Tax=Bes... [more]
A0A6P5WDE5_9EIME4.760e-1638.66zinc finger CCHC domain-containing protein 9 n=2 T... [more]
A0A6S7GHJ9_PARCT8.410e-1643.37Zinc finger CCHC domain-containing 9 n=2 Tax=Param... [more]
A0A0M9VQ41_9BASI9.180e-1640.32Zinc knuckle family protein n=1 Tax=Malassezia pac... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 126..142
e-value: 2.4
score: 8.9
coord: 177..193
e-value: 0.069
score: 18.4
coord: 204..220
e-value: 0.51
score: 13.0
coord: 149..165
e-value: 0.045
score: 19.5
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 150..165
score: 8.565
NoneNo IPR availableGENE3D4.10.60.10coord: 171..222
e-value: 8.8E-8
score: 33.8
NoneNo IPR availableGENE3D4.10.60.10coord: 85..170
e-value: 3.1E-9
score: 38.4
IPR042246Zinc finger CCHC domain-containing protein 9PANTHERPTHR46242FAMILY NOT NAMEDcoord: 37..263
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 119..167
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 170..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig966contigF-serratus_M_contig966:95689..100226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig966.20981.1mRNA_F-serratus_M_contig966.20981.1Fucus serratus malemRNAF-serratus_M_contig966 95689..100226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig966.20981.1 ID=prot_F-serratus_M_contig966.20981.1|Name=mRNA_F-serratus_M_contig966.20981.1|organism=Fucus serratus male|type=polypeptide|length=356bp
TRCTLGLRVCFTSCLEMTAIKRSLTEITQASAPELTKTERRRLAKQAKRE
RKKSNDGKSPPGNVAGGKGLADQGDDSANGRGEVKRKKNDSKPRMTKEER
RAKYTQKAYEERERRNQAGSGAVKTRCLGCRAWGHVVAKCPDAKANTGIC
FNCGSSEHALRACPKPKQKDGSLPHAKCFVCQEKGHISAHCKYNANGIYP
KGGSCKGCGSRHHLSKNCPDNPRANEEVRKAEDAAVAESSEGDESDGAAD
TSLASAPSRTLAAAEADKSQPKRRLAKAVGTSDKGGASRMLGASRSGGDD
LEDDNYYEPEDVENLYGDATSDGVDDKMPIGGGIEGPAQQGQKKQGKKKA
KIVVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR042246ZCCHC9
IPR036875Znf_CCHC_sf