prot_F-serratus_M_contig966.20980.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig966.20980.1
Unique Nameprot_F-serratus_M_contig966.20980.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length691
Homology
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: M4B6V9_HYAAE (BSD domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6V9_HYAAE)

HSP 1 Score: 139 bits (351), Expect = 2.470e-31
Identity = 148/481 (30.77%), Postives = 211/481 (43.87%), Query Frame = 0
Query:  181 DARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTL-KFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKEV-VGKFNRHARLVMQPPDGGS----GSGRRPALV-------------DSAALATDLPELRQHDKVTQEKLNIANKNRY--HEGGGATSAGSQSHIQPAKAVEEVTLAEAKEELGPEFSILAVRPA---ISKAVATPDQALSALRKCTKETDKGIGNAASLQGYPEDFIGGMHRHFQIVGELLRHFYATLDRPRTDAS--ATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            + +QRAALLA +  L  Q+ EMV   ++SEE+FW SRR  +A E +K   + TG  S + +DL AE  + G + K+ LNA  IH IF  YP V  AYQ  VP +MTE EFW  + +S YF+RDR A                   G +DMF ++       E KEK+E     SV                  G VDP+VDLT+      T E     PA+    E +    + + KFNRH   V+ P   G      +GR  A               DS   AT L +L          L + +++RY  H        G  +   P   V +V  A  +  +  E +  + +     +++ VA  D   SA        +   G  A+ +  P +F   ++  F  V ELLRHF +   +        A  KL ++ ++M +KY EL   R+ LP     N L+ ++KP  D LN AF
Sbjct:  120 EIKQRAALLAANPTLKRQHMEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAAENDAGGNVVKYNLNAEVIHQIFIQYPAVHVAYQGQVPDKMTETEFWGAFFKSKYFHRDRKA-------------------GHEDMFTKY-------EEKEKEESKNV-SVD---------------PRGIVDPLVDLTT------TEEDAAVHPAKRRISEKENLSGITIAKFNRHGAYVLDPAHAGKLQQQRAGRSNAQQPLPQKTKPKACYHDSVEEATLLDDLHDQAPPPYNPLTLEDESRYFQHAEKDVAGNGDAASQLPLSDVAQVFQATCRAPIKLESAYSSSKTCFDVLAEVVACSDST-SASAXXXSAANLASGKLAA-EYIPNEFKKQVYNQFHDVCELLRHFLSFKAKVAAGGGPEAQRKLNKIVEKMGSKYDELVKLRESLPPHEK-NLLAPLLKPFDDQLNLAF 547          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A484DRU4_BRELC (BSD domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRU4_BRELC)

HSP 1 Score: 139 bits (349), Expect = 4.670e-31
Identity = 146/489 (29.86%), Postives = 214/489 (43.76%), Query Frame = 0
Query:  181 DARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTL-KFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGS---GSGRRPALVDSAAL--------------ATDLPELRQHDKVTQEKLNIANKNRYHEGGGATSAGSQSHIQPAKAVEEVTLAEAKEELGPEFSILAVRPAISKAVATPDQ-----ALSALRKCTKETDKGIG--NAASLQG-------YPEDFIGGMHRHFQIVGELLRHFYATLDRPRTDAS--ATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            + +QRAALLA    L  Q+ EMV   ++SEE+FW SRR  +A E +K   + T   S + +DL A+  + G + K+ LNA  IH IF  YP V+ AYQ  VP +MTE EFW  + +S YF+RDR A                   G +DMF ++       E KEK E         S+G    A+   R   G VDP++DLT+   D     +        L E+       + KFNRH   V+ P   G+    + R+     S  L              AT L +L+     T   L + N++RY +     S      +  +K  E ++L +A E           + +I   +A P        L+ +  C+  T       +AA+L          P +F   ++  F  V ELLRHF +   +        A  KL ++ ++M +KY EL   R+ LP     N L+ ++KP  D LN AF
Sbjct:  124 EIKQRAALLAASPTLKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTAKTSAILTDLAADNETGGNVVKYNLNAEVIHQIFIQYPAVYLAYQGQVPDKMTETEFWGAFFKSKYFHRDRKA-------------------GHEDMFTKY-------EEKEKQE---------SKG----ASIDPR---GLVDPLIDLTTTEEDAAVHPI-----RRHLNEKDNPFSTTIAKFNRHGAYVLDPAHAGNLQLQTNRKSHAQQSVVLKNQPKGGFHDNLKEATLLDDLQDKVLPTYNPLTLENESRYFQHAEKIS------VAESKVSENLSLLDAAEAFR-----ATCKASIDLKMAYPSSKTCFNVLAEVVACSDSTSDSASTSSAANLASGALGAAYIPNEFKKQVYNQFHDVCELLRHFLSFKAKLAAGGGPEAKRKLNKIVEKMGSKYDELVKLRESLPPHEK-NLLAPLLKPFDDQLNLAF 551          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: K3WBE8_GLOUD (Uncharacterized protein n=2 Tax=Globisporangium ultimum TaxID=2052682 RepID=K3WBE8_GLOUD)

HSP 1 Score: 137 bits (346), Expect = 1.190e-30
Identity = 141/478 (29.50%), Postives = 207/478 (43.31%), Query Frame = 0
Query:  181 DARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTL-KFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKE-----VVGKFNRHARLVMQPPDGGS-------GSGRRPALVDSAALATDLPELRQHDKVTQEKLNIANKNRYHEG---GGATSAGSQSHIQPAKAVEEVTLAEAKEELGPEFSILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQGY-----PEDFIGGMHRHFQIVGELLRHFYATLDRPRTD--ASATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            + +QRAALLA +  L  Q+ EMV   ++SEE+FW SRR  +A E +K   + TG  S + +DL  +  + G + K+ LNA  IH IF  YP V  AYQA VP +MTE EFW  + +S YF+RDR A                   G +DMF ++       E KEK EM +  S+                    VDP+VDLTS        E D A     L +     K+      + KFNRH   V+ P   G         S  R    D+   AT L +L+         L + +++RY +     G   A + + +      + V  A         F++    P  + ++    + +S+      +     G   +  G      P +F   ++  F  V ELLRHF +   +      A A  KL ++ ++M +KY EL   R+ LP     N L+ ++KP  D LN AF
Sbjct:  138 EIKQRAALLAANPTLKRQHTEMVNEGLISEEDFWASRRHLIANEASKR--QKTGKTSAILTDLSGDNDTGGNVVKYNLNAEVIHQIFIQYPAVHLAYQAQVPDKMTETEFWGAFFKSKYFHRDRKA-------------------GHEDMFTKY-------EEKEK-EMTKGVSID---------------PRAIVDPLVDLTST-------EEDAASVTHSLQKARPGPKDDGSNITIAKFNRHGAYVLDPSHAGKLQQGHVEASKPRANYHDNVREATLLDDLQSKAPPPYNPLTLEDESRYFQQPSQDGGNGAVATTLVDATAQFQRVCRAS--------FALDLAFPPATTSLNVLKEVVSSSEGSGSDASTSFGATTTSGGMTAEYIPTEFKKQVYNQFHDVNELLRHFLSFKAKVAQGGGADAQHKLNKIVEKMGSKYDELVKIREALPPHER-NLLAPLLKPFDDQLNLAF 555          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A0P1APW3_PLAHL (General transcription factor iih n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APW3_PLAHL)

HSP 1 Score: 133 bits (334), Expect = 4.040e-29
Identity = 146/485 (30.10%), Postives = 207/485 (42.68%), Query Frame = 0
Query:  181 DARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTL-KFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKE---VVGKFNRHARLVMQPPDG---------------GSGSGRRPA--LVDSAALATDLPELRQHDKVTQEKLNIANKNRYHEGGGATSAGS------QSHIQPAKAVEEVTLAEAKEELGPEFSILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQGY-PEDFIGGMHRHFQIVGELLRHF--YATLDRPRTDASATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            + +QRAALLA +  L  Q+ EMV   ++SEE+FW SRR  +A E +K   + T   S + +DL A   S G + K+ LNA  IH IFT YP V+ AYQ  VP +MTE EFW  + +S YF+RDR A                   G +DMF ++       E K   E +  G                    G VDP++DLT+   D           A+  T + K+       + KFNRH   V+ P  G                S S ++P+    D+   AT L +LR         L + +++RY +     +A         S +Q A   +    A    EL    S L     +++ VA  D   S            + + A    Y P +F   ++  F  V ELLRHF  + T         A  KL R+ ++M +KY EL   R+ LP     N L+ ++KP  D LN AF
Sbjct:  124 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTAKTSAILTDLAANNDSGGNVVKYNLNAEVIHQIFTQYPAVYMAYQEQVPDKMTETEFWGAFFKSKYFHRDRKA-------------------GHEDMFSKY-------EEKGNQEAMNVGID----------------PRGIVDPLIDLTTTEEDAAVHH------AKRRTNKNKKDDPGSITITKFNRHGAYVLDPAHGVKLQQQKAQKNNAQQSSLSPKKPSAGFHDNLGDATLLDDLRNKPSRPYNPLTLEDESRYFQHAQKGTAADIDTPDKMSLVQAALEFQATCRAPFHLELAYPSSNLCFN-VLAEVVACSD---STSDXXXXXXXANLASGALAAEYIPNEFKKQVYIQFHDVCELLRHFLSFKTKVAEGGGPEAQHKLNRIVEKMGSKYDELVKLRESLPPHEK-NLLAPLLKPFDDQLNLAF 553          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A3F2RJ52_9STRA (BSD domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJ52_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.410e-29
Identity = 133/453 (29.36%), Postives = 202/453 (44.59%), Query Frame = 0
Query:  181 DARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTL-KFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGD---YHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSGRRPA------------LVDSAALATDLPELRQHDKVTQEKLNIANKNRYHE----GGGA--TSAGSQSHIQPAKAVEE-----VTLAEAKEELGPEFSILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQGYPEDFIGGMHRHFQIVGELLRHF--YATLDRPRTDASATVKLQRLEDRMTAKYQEL 604
            + +QRAALLA +  L  Q+ EMV   ++SEE+FW SRR  +A E +K   + TG  S + +DL A+  ++G + K+ LNA  IH IF  YP V+ AYQ  VP +MTE EFW  + +S YF+RDR A                   G +DMF ++       E KEK+                 A        G VDP++DLT+   D   +H+++        +LT +       + KFNRH+  V+ P   G    ++ A              D+   AT L +L + D      L + +++RY +    G GA   + G  S +  A+  +      + L  A       F++LA   A S + +    A SA    +         A + +  P +F   ++  F  V ELLRHF  + T         A  KL ++ ++M +KY EL
Sbjct:  123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKA-------------------GHEDMFTKY-------EEKEKE----------------VAKGVSIDPRGIVDPLIDLTTTEEDALIHHSKK--------QLTGKENPLSITIAKFNRHSAYVLDPAHAGKLQQQKAAEKQPQKKKPKAGYHDNVEEATLLDDLAKKDPPPYNPLTLEDESRYFQHAEKGSGADGNTHGKLSLVDAAQVFQTTCKAPIPLENAYPTSKTCFNVLAEVVACSDSTSDSASASSAANLAS--------GALAAEYIPNEFKKQVYNQFHDVCELLRHFLSFKTKVAEGGGPEAQRKLNKIVEKMGSKYDEL 515          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A2P4XBN0_9STRA (General transcription factor IIH subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XBN0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 4.060e-28
Identity = 133/490 (27.14%), Postives = 196/490 (40.00%), Query Frame = 0
Query:   24 KKIAGTVWFTSRRTLWRA-SDGKAPVQR--VDVPWAAIKSFQCSPANEARAMIRLLRVTEGDPPIILRFLGSPADTPR--EVMERAQTAIRRAMKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKKMKWKTRKGLMGTASGGQPLRQRDSMPGGRMRDVHDARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTLKFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGD---YHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGG------SGSGRRPALV-----------DSAALATDLPELRQHDKVTQEKLNIANKNRY--HEGGGATSAGSQSHI 486
            KK  G   F+ +   W   +  +AP     + VPW+ ++  Q S  +  +AMIRL R+      ++L F+          EV E+A+  I R ++                                        G  GT S    L            +  + +QRAALLA +  L  Q+ EMV   ++SEE+FW SRR  +A E +K   + TG  S + +DL A+      +K+ LNA  IH IF  YP V+ AYQ  VP +MTE EFW  + +S YF+RDR A                   G +DMF ++  QE    +                   G +   +    G VDP++DLT+   D   +H +          +TE+       + KFNRH   V+ P   G      +G G  P  +           DS   AT L +L+         L + +++RY  H   G T  G+ S I
Sbjct:   12 KKRDGRAEFSLKGLRWTTDASPEAPAGHPPIIVPWSTVQDQQVSSLSSPKAMIRL-RLAHNST-LVLEFVSESGSLEEAFEVREQAKDFIARRLRDN--------------------------------------GARGTRSNAAAL-----------CNPTEIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNEGGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKA-------------------GHEDMFTKYEEQEKAESK-------------------GVSIDPR----GIVDPLIDLTATEEDAAVHHAKR--------HITEKENPSSITITKFNRHGAYVLDPAHAGKLQQLKTGKGNAPQTLLQKKKAKAGHHDSLEDATLLDDLQDKAPPPYNPLTLEDESRYFQHAEKGTTIDGNTSSI 398          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A0X7YIL8_GLOUL (Putative general transcription factor IIH subunit (Fragment) n=19 Tax=Globisporangium TaxID=1448052 RepID=A0A0X7YIL8_GLOUL)

HSP 1 Score: 115 bits (287), Expect = 5.520e-24
Identity = 96/289 (33.22%), Postives = 129/289 (44.64%), Query Frame = 0
Query:  181 DARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTL-KFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKE-----VVGKFNRHARLVMQPPDGGSGSGRRPALVDSAALATDLPELRQHDKVTQEKL 463
            + +QRAALLA +  L  Q+ EMV   ++SEE+FW SRR  +A E +K   + TG  S + +DL  +  + G + K+ LNA  IH IF  YP V  AYQA VP +MTE EFW  + +S YF+RDR A                   G +DMF ++       E KEK EM +  S+                    VDP+VDLTS        E D A     L +     K+      + KFNRH   V+ P   G         +    +    P    HD V +  L
Sbjct:   37 EIKQRAALLAANPTLKRQHTEMVNEGLISEEDFWASRRHLIANEASKR--QKTGKTSAILTDLSGDNDTGGNVVKYNLNAEVIHQIFIQYPAVHLAYQAQVPDKMTETEFWGAFFKSKYFHRDRKA-------------------GHEDMFTKY-------EEKEK-EMTKGVSID---------------PRAIVDPLVDLTST-------EEDAASVTHSLQKARPGPKDDGSNITIAKFNRHGAYVLDPSHAGK--------LQQGHVEASKPRANYHDNVREATL 266          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A485LKS2_9STRA (Aste57867_22751 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKS2_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.600e-23
Identity = 135/471 (28.66%), Postives = 208/471 (44.16%), Query Frame = 0
Query:  181 DARQRAALLAGD-DVLTAQYKEMVEGNVVSEEEFWES--RRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSG-TLKFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSGRRPALVDSAALATDLPELRQHDKVTQEKLNIANKNRYHE----------GGGATSAGSQSHIQPAKAVEEVTLAEAKEELGPEFSILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQGYPEDFIGGMHRHFQIVGELLRHFYATLDRPRTDASATV--KLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            + +QRA LL    + L  QY +MV G ++S+ +FW    R++ L  E+AK   + TG  S++ SD+  E  S G ++K+ LN   IH IF  YPVV+ AYQ  VP +MT  EFW  +V+S Y +RD                 A+A    +DMF R+  +   + R                     AA    L    VDP+VDL++    Y   +  D      +T+ +      + KFNRHA  V+Q       +       DS A A ++ +L+         LN+ N  RY E          GG A +    S +    A+E + L++   +L   F   A R  +   V       +AL +  K+ D    ++        DF   +  HF  V ELLRH+ +   + + D +A    KL+R++ +M  K++ L   R +LP  A    L+ ++ P +D LN  F
Sbjct:  132 ERKQRALLLQKHPNTLKRQYTDMVTGGLISDADFWNLPIRKQLLLAENAKR--QKTGKTSEILSDVQGENQSGGKSVKYNLNPEIIHQIFVQYPVVYMAYQEQVPDKMTGVEFWGLFVKSKYAHRDSAK--------------AMAAAHQEDMFTRYEEKFQTQRR---------------------AAGPPTLSH--VDPLVDLSAS---YALSKGPDT-----ITDTS------LAKFNRHAADVLQVKQTTLSAS---LAKDSIAAAVEMDDLQLPPSQPVLPLNLDNTARYFEHEEDGQTIGAGGVAMAKWQASQV----ALERMMLSQL--DLAVAFPHNAAR--VLDDVLKESDETNALDQANKQADTRFISS--------DFKTQLTNHFHDVSELLRHYLSFKAKAQKDGTAEARGKLERIKAKMGDKFEHLERIRNKLP-PAEKTTLAPLLTPFLDQLNIPF 529          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A6G0WQK2_9STRA (BSD domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQK2_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.950e-23
Identity = 130/461 (28.20%), Postives = 198/461 (42.95%), Query Frame = 0
Query:  181 DARQRAALLAG-DDVLTAQYKEMVEGNVVSEEEFWES--RRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSG-TLKFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSGRRPALVDSAALATDLPELRQHDKVTQEKLNIANKNRYHEGGGATSAGSQSHIQPAKAVEEVTLAEAKEELGPEFSILAVRPAISKAVATP--DQALSALRKCTKETDKGIGNAASLQGYPEDFIGGMHRHFQIVGELLRHFYATLDRPRTDASATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            + +QRA LL    + L  QY +MV G ++SE +FW    RR+ L  E AK   +  G  S++ SD+  E  S G ++K+ LN   IH IF  YPVV+ AYQ  VP +M+  EFW  +V+S Y +RD            NK +        +D+F ++ A+            LQA  +Q               +   VD +++L++    Y  +  D  D  E  +         + KFNRH   V+Q       +    A VDS A A ++ +L+         LN+ N +RY E         Q   Q  KA E  T A          + L  +P    A      D  L  + + + + +         +    DF   +  HF  V ELLRH+ +   +   D  A VKL+R++ +M  K++ L   R +LP  A    L+ ++ P +D LN  F
Sbjct:  124 ERKQRALLLQKYPNTLKRQYTDMVTGGLISEADFWNLPVRRQLLLVESAKR--QKVGKTSEILSDVQGENQSGGKSVKYNLNPDIIHQIFVQYPVVYLAYQEQVPDKMSGIEFWGLFVKSKYAHRDHA----------NKAQQQH----QEDIFTKYEAK------------LQAQKLQNG-----------PPDVRHVDQLINLSAS---YDVKSKDPKDAVETTS---------LAKFNRHGADVLQVK-----TNHAVAPVDSVAAAVEIEDLKVAPPEEMLPLNLDNPSRYFE---------QEDSQEKKAAES-TPATTWRLAQSALATLVKQPLNLSAAFPERGDAILQDVIQESNDNNDLAQKQTDTRFISSDFKTQLTNHFHDVSELLRHYLSFKAKALLDPDARVKLERIKAKMGDKFEHLERIRNKLP-PAEKTTLAPLLTPFLDQLNIPF 517          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A1V9YHP7_9STRA (General transcription factor IIH subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YHP7_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.040e-23
Identity = 132/474 (27.85%), Postives = 209/474 (44.09%), Query Frame = 0
Query:  181 DARQRAALLAGD-DVLTAQYKEMVEGNVVSEEEFWE--SRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSG-TLKFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQ------PPDGGSGSGRRPALVDSAALATDLPELRQHDKVTQEKLNIANKNRY--HEGGGATSAGSQSHIQPA-KAVEEVTLAEAKEELGPEFSILAVRPAISKAVATPDQALSALRKCTKET-DKGIGNAASLQG---YPEDFIGGMHRHFQIVGELLRHFYATLDRPRTDAS--ATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            + +QRAALLA   + L  Q+ +MV G ++SE +FW    R++ L  E  K   + TG  S++ +D+  +  S    +K+ LN   IH IF  YPVV+ AYQ  VP +M   EFWT +V+S Y +RDR            K + +    G +D+F  +   E + +++ K  ++Q                      G VDP++DLT+   D  T       P  E+T+        + KFNRHA  V+       P    +   +R AL ++  L     +L+         L++ N  RY  H+          + ++PA +A+E + + +               PA     A  D     L +C  +   + + N  S Q     P DF   +   F  V ELLRH+ +  ++   D S  A +KL+R++ +M  KY+ +   R++LP  A    L  +  PL D LN  F
Sbjct:  122 ERKQRAALLAAHPNTLKRQHTDMVTGGLISESDFWNLTCRKQLLMAEAEKR--QKTGKTSEILTDVQGQNQSGEQAVKYNLNPEIIHQIFVQYPVVYMAYQEQVPDKMDGVEFWTMFVKSKYAHRDR-----------LKHQQS----GVEDLFTIY---EEKWQKQHKAPVVQ----------------------GIVDPLIDLTATAADGLTAAASAGRP--EVTDTN------IAKFNRHAADVLNAAVTIHPKKSKAVHTKRAALAEAVVL----DDLQPPTPAPYIPLSLDNTARYFEHDEHSLVHRSFLAQLEPAQRALERMLMQQPN------------LPAAFPKSAASDITAEILAECASDAATEAMANPRSEQHARFIPNDFKTLLTNLFHDVNELLRHYLSFKEKVAADGSPEARMKLERIKAKMGEKYEHVERIRQKLP-PAERTSLGPLFLPLSDQLNIPF 528          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M4B6V9_HYAAE2.470e-3130.77BSD domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A484DRU4_BRELC4.670e-3129.86BSD domain-containing protein n=1 Tax=Bremia lactu... [more]
K3WBE8_GLOUD1.190e-3029.50Uncharacterized protein n=2 Tax=Globisporangium ul... [more]
A0A0P1APW3_PLAHL4.040e-2930.10General transcription factor iih n=1 Tax=Plasmopar... [more]
A0A3F2RJ52_9STRA4.410e-2929.36BSD domain-containing protein n=1 Tax=Phytophthora... [more]
A0A2P4XBN0_9STRA4.060e-2827.14General transcription factor IIH subunit (Fragment... [more]
A0A0X7YIL8_GLOUL5.520e-2433.22Putative general transcription factor IIH subunit ... [more]
A0A485LKS2_9STRA2.600e-2328.66Aste57867_22751 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WQK2_9STRA3.950e-2328.20BSD domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A1V9YHP7_9STRA4.040e-2327.85General transcription factor IIH subunit n=1 Tax=A... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 590..610
NoneNo IPR availableCOILSCoilCoilcoord: 331..351
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 12..79
NoneNo IPR availableSUPERFAMILY140383BSD domain-likecoord: 179..218
IPR005607BSD domainSMARTSM00751wurzfinal6coord: 249..301
e-value: 3.6E-6
score: 36.5
IPR005607BSD domainPFAMPF03909BSDcoord: 254..303
e-value: 1.4E-9
score: 37.8
IPR005607BSD domainPROSITEPS50858BSDcoord: 249..301
score: 10.958
IPR013876TFIIH p62 subunit, N-terminalPFAMPF08567PH_TFIIHcoord: 23..108
e-value: 1.9E-11
score: 44.1
IPR027079TFIIH subunit Tfb1/GTF2H1PANTHERPTHR12856TRANSCRIPTION INITIATION FACTOR IIH-RELATEDcoord: 15..644

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig966contigF-serratus_M_contig966:70178..76216 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig966.20980.1mRNA_F-serratus_M_contig966.20980.1Fucus serratus malemRNAF-serratus_M_contig966 70025..76678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig966.20980.1 ID=prot_F-serratus_M_contig966.20980.1|Name=mRNA_F-serratus_M_contig966.20980.1|organism=Fucus serratus male|type=polypeptide|length=691bp
MAAIAGPALGAGEKVLITADAVHKKIAGTVWFTSRRTLWRASDGKAPVQR
VDVPWAAIKSFQCSPANEARAMIRLLRVTEGDPPIILRFLGSPADTPREV
MERAQTAIRRAMKGDVEGDVEGEKGSEEAGTANGGKGGKNGGPSKKMKWK
TRKGLMGTASGGQPLRQRDSMPGGRMRDVHDARQRAALLAGDDVLTAQYK
EMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSS
GTLKFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFN
RDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQ
AGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAE
ELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSGRRPALVDSAALATDLP
ELRQHDKVTQEKLNIANKNRYHEGGGATSAGSQSHIQPAKAVEEVTLAEA
KEELGPEFSILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQG
YPEDFIGGMHRHFQIVGELLRHFYATLDRPRTDASATVKLQRLEDRMTAK
YQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAFEKSEERKRRGPGGAR
KAGANTGGWVRADEDDDDEEEEEDEDDEEQELRGGWSVVK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005607BSD_dom
IPR013876TFIIH_BTF_p62_N
IPR027079Tfb1/GTF2H1