prot_F-serratus_M_contig966.20980.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig966.20980.1
Unique Nameprot_F-serratus_M_contig966.20980.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length691
Homology
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: D8LFT0_ECTSI (TFIIH subunit (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT0_ECTSI)

HSP 1 Score: 687 bits (1772), Expect = 2.270e-238
Identity = 398/683 (58.27%), Postives = 457/683 (66.91%), Query Frame = 0
Query:    4 IAGPALGAGEKVLITADAVHKKIAGTVWFTSRRTLWRASDGKAPVQRVDVPWAAIKSFQCSPANEARAMIRLLRVTEGDPPIILRFLGSPADTPREVMERAQTAIRRAMKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPS------KKMKWKTRKGLMGTASGGQPLRQRDSMPGGRMRDVHDARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTLKFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKK-------------RLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSG---RRPALVDSAALATDLPELRQHDKVTQEKLNIANKNRYHEGGG------------------ATSAGSQSHIQPAKA--VEEVTLAEAKEELGPEFSILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQGYPEDFIGGMHRHFQIVGELLRHFYATLDRPRTDASATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAFEKSEERKRR 644
            + GP+LGAGE+V++TA AVHKK  GTVWFTSRR LW+A+DGKA VQRV+V WAA+KSFQCSPA+EARAM+RLLRVTEG PPII RF  +P  TPREV+ERAQ A+R+A+KG                             S      KKMKWKTR GL+GTASGGQ LR RDSMPGGRMR+VHDARQRAALLAGD+VLTAQY+EMV+G VV+EEEFWESRRRTLAEEDAK+ASRHTGTPS+MPSDLVAETTS+GTLKFKLNARTIHSIFTMYP+VFKAYQANVPTEM+EKEFWTKY+QSAYFNRDRG                                                                             RLE+G+VDPMVDLTSQWGD+H REVDD+DP EEL+E A +RKEVVGKFNRHARLVMQP           RRPALVDSAA ATD+PELR  ++V QEKL+IA+KNRY  GGG                  A S GS S  Q  +   VE VTLAEAK +LGP FSIL  RP +S AVA+P QA+SAL++CT+E  +G+G+A  LQG                     HFYA+LDRP++DA A  KL RLE RM +KY+EL  ER+RLPR+A GNRLSAVIKPL+D L+HAF K EE K R
Sbjct:    3 VPGPSLGAGEEVVMTAHAVHKKTPGTVWFTSRRALWKAADGKAAVQRVEVAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRSKTGVAEGGTNGTGKGKAGKYGGSSSKDALKKMKWKTRGGLLGTASGGQSLRHRDSMPGGRMRNVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLESGSVDPMVDLTSQWGDHHAREVDDSDPTEELSEAANKRKEVVGKFNRHARLVMQPXXXXXXXXXXXRRPALVDSAASATDMPELRLREEVAQEKLDIAHKNRYRGGGGTNRADSNGGXXXXXXSSGALSVGSLSRPQSPRGMVVETVTLAEAKAQLGPGFSILGERPRVSGAVASPGQAMSALKECTREASRGVGDAFHLQG---------------------HFYASLDRPKSDAGAAAKLDRLETRMNSKYKELTEERRRLPRNADGNRLSAVIKPLLDSLDHAFLKLEESKSR 664          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A6H5JXC6_9PHAE (BSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC6_9PHAE)

HSP 1 Score: 587 bits (1514), Expect = 7.320e-200
Identity = 354/622 (56.91%), Postives = 403/622 (64.79%), Query Frame = 0
Query:   72 MIRLLRVTEGDPPIILRFLGSPADTPREVMERAQTAIRRAMKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPS-----KKMKWKTRKGLMGTASGGQPLRQRDSMPGGRMRDVHDARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTLKFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGT---------------------AASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGSG---SGRRPALVDSAALATDLPELRQHDKVTQEKLNIANKNRYHEGGG------------------ATSAGSQSHIQPAKA--VEEVTLAEAKEELGPEFSILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQGYPEDFIGGMHRHFQIVGELLRHFYATLDRPRTDASATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAFEKSEERKRR 644
            M+RLLRVTEG PPII RF  +P  TPREV+ERAQ A+R+A+KG                             S     KKMKWKTR GL+GTASGGQ LR   SMPGGRMRDVHDARQRAALLAGD+VLTAQY+EMV+G VV+EEEFWESRRRTLAEEDAK+ASRHTGTPS+MPSDLVAETTS+GTLKFKLNARTIHSIFTMYP+VFKAYQANVPTEM+EKEFWTKY+QSAYFNRDRG                                                                                A  +KR   G  D  V      G   +R VDD+DP EEL+E A +RKEVVGKFNRHARLVMQP         +GRRPALVDSAA ATD+PELR  ++V ++KL+IA+KNRY  GGG                  A SAGS S  Q  +   VE VTLAEAK +LGP FSIL  RP +S AV +P QA+SAL++CT+E  +G+G+A  LQGYPEDFIG MHRHFQIVGELLRHFYATLDRP++DA A  KL RLE RM +KY+EL  ER+ LPR+A GNRLSAVIKPL+DCL+HAF K EE K R
Sbjct:    1 MMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRIRTGVAEGGTNGAGKGKAGKDGGSSKNALKKMKWKTRGGLLGTASGGQSLRH--SMPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRRQARERKRGPYGGPDFAV-----GGSPRSRGVDDSDPTEELSEAANKRKEVVGKFNRHARLVMQPXXXXXXXXVTGRRPALVDSAASATDMPELRLREEVARDKLDIAHKNRYRGGGGTNGADSXXXXXXXXXXXGAVSAGSLSRPQSPRGMLVETVTLAEAKAQLGPGFSILGERPRVSGAVTSPGQAMSALKECTREASRGVGDAFHLQGYPEDFIGSMHRHFQIVGELLRHFYATLDRPKSDAGAAAKLDRLETRMNSKYKELTEERRILPRNADGNRLSAVIKPLLDCLDHAFLKLEESKSR 615          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A835YZ40_9STRA (BSD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ40_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.930e-69
Identity = 231/646 (35.76%), Postives = 314/646 (48.61%), Query Frame = 0
Query:   55 WAAIKSFQCSPANEARAMIRLLRVTEGDPPIILRFLGSPADTPREVMERAQTAIRRAMKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKKMKWKTRKGLMGTASGGQPL-----RQRDSMP----GGRMRDVHD---------------ARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTLKFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGA----DDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGG---GTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSGRRPALVDSAALATDLPELRQHDKVTQEKLNIANKNRYH--EGGGATSAGSQSHIQPAKAVEEVTL--------------------------AEAKEELGPEFSILAVRPAISKAVATPDQALSALRKCTKET-DKGIG-NAASLQGYPEDFIGGMHRHFQIVGELLRHFYATLDRPRTDASATV---KLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAFE 636
            W+ +K    SPA  A+AMI++   +    P++++ L S   T  +++  A++ I + ++      XXXXXXXXXXXXXXXXXX        K K     G  G   G Q       RQR + P    GGR  D                  A++RAALLA D VL AQY ++VEG V+S+ EFW  RR  L  E A + +R  G  S + +D V          F+L  R IH IF MYP V +AY+A VP E++EKEFW KY QS Y+ RDRG              +A AGG      DDMF RFAA+                            G +A ++      VDP VDL +Q+ DYH+R VDD  P E     A   + V+ + NRHA LVM+P  GG G     A  D  A ATDLPEL        + L++AN +RY   + G A          P    + V+L                            A     P  ++    P +++A+  P +AL  L+ CTKE    G G +AA+ + +P++F+  MHRHFQ++GELLRHFYA +        + +   +L RL  +M +KY EL   R+ LPRDA G++LS +IKPL+D L+ AFE
Sbjct:    3 WSLVKDHMVSPATSAKAMIKVNPTSSAVDPMVIQVLDSGLATAADILATARSTILKVLRSYAGSSXXXXXXXXXXXXXXXXXXG-------KAKSLNGDGGEGAPRGAQSWGAGHKRQRTAGPLSGAGGRALDAAAVQPPAXXXXXXAADVAQRRAALLARDAVLRAQYADVVEGGVLSDAEFWAGRRGMLEGEAAAARARRQGARSALGAD-VRPAVEGAKQVFRLTPRDIHQIFLMYPAVERAYKAKVPVELSEKEFWVKYFQSQYYTRDRGG-------------AAKAGGATISAGDDMFSRFAAEYEXXXXXXXXXXXXXXXXXXXXXXXXXRGNSAQQRLSGTEGVDPTVDLAAQFSDYHSRPVDDRGPEERAG--AADAQAVIERLNRHAALVMRPRAGGGG-----APHDDPAAATDLPELHAPAPPPVQPLHLANASRYAGAQRGAAXXXXXXXXXXPVVRRKRVSLEATCIKRARPPHTHTHTSLQNNTATHCSAAAPRVPPQAVQLREPNLARALPPPARALDVLQACTKEAAGAGAGGSAATAKSFPQEFVTQMHRHFQVIGELLRHFYAGIGGXXXXXXSDIVQKQLHRLVTKMGSKYDELKALRQGLPRDAQGSQLSTLIKPLLDSLDDAFE 620          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A8K1C257_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C257_PYTOL)

HSP 1 Score: 162 bits (410), Expect = 4.150e-39
Identity = 174/637 (27.32%), Postives = 272/637 (42.70%), Query Frame = 0
Query:   24 KKIAGTVWFTSRRTLWRASDG-----KAPVQRVDVPWAAIKSFQCSPANEARAMIRLLRVTEGDPPIILRFLGSPA-DTPREVMERAQTAIRRAMKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKKMKWKTRKGLMGTASGGQPLRQRDSMPGGRMRDVHDARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTL-KFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSGRRPALV-------DSAALATDLPELRQHDKVTQEKLNIANKNRY--HEGGGATSAGSQSHIQPAKAVEEVTLAEAKEELGPEFSILAVRPA-------ISKAVATPDQALSALRKCTKETDKGIGNAASLQGYPEDFIGGMHRHFQIVGELLRHFYATLDRPRT--DASATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            KK  G+   + +   W   +G     ++ +  V V W +++  Q S A   +AMIRL   +  +  +IL F+     +   EV ++A+  I R++                                              ASG   L+QR +     + +  + + RAALLA +  L  Q+ EMV   ++SEE+FW SRR  +A E +K   + TG  S + +DL  +  + G++ K+ LNA  IH IF  YP V  AY+A VP +MTE EFW  + +S YF+RDR +                   G +DMF RF  QE         E+L+  +V                  G VDP++DLTS   D   R+  D    ++  E +      + KFNRH   V+ P   G   G   A+        DS   AT L +L+  +      L I + ++Y  H   G+    +  +  P   +EE + A  ++  G    +    P+       +++ +A  D +  A    +      +  A +    P +F   ++  F  V ELLRHF +   +     DA A  KL+R+ +RM +KY EL+  R+ LP     N L+ ++KP  D LN AF
Sbjct:   12 KKRDGSAVLSEKGLRWTPDEGPLDDAQSRIAPVVVSWNSVQDQQVSSATSPKAMIRLRLAS--NVVVILEFISDKGLEHAFEVRDQAKEFIARSI---------------------------------------------AASG---LKQRSTADRTPLCNAAEIKHRAALLASNPTLKRQHTEMVNQGLISEEDFWSSRRHLIANEASKR--QKTGKTSAILTDLAGDNEAGGSVVKYNLNAEVIHQIFIQYPAVHLAYKAQVPDKMTETEFWGAFFKSKYFHRDRKS-------------------GHEDMFTRFEEQE--------QEILKDHAVD---------------PRGIVDPLIDLTSTEEDNAVRKAIDKSLRKQTNEPSNI---TIAKFNRHGAYVLDPAHAGKLQGTADAIKKTRSSHHDSIRDATLLDDLKGKEAPPYNPLTIEDDSKYFQHSEAGSKKGAALQNQAPTATLEE-SCALFRDACGSSIRLEQAFPSSKTSLDVLAEIIAHADTSQDATASSSAVL---VSGATAADCIPNEFKKQVYTQFHDVCELLRHFLSFKAKAERAGDADAKHKLKRIVERMESKYDELSKIREALPPHEK-NLLAPLLKPFDDQLNIAF 546          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A2D4CGY8_PYTIN (General transcription factor IIH subunit, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGY8_PYTIN)

HSP 1 Score: 150 bits (380), Expect = 4.250e-35
Identity = 153/499 (30.66%), Postives = 224/499 (44.89%), Query Frame = 0
Query:  157 GTASGGQPLRQRDSMPGGRMRDVHDARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTL-KFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSG-----RRPALVDSAAL--ATDLPELRQHDKVTQEKLNIANKNRY--HEGGGATSAGSQSHIQPAKAVEEVTLAEAKEELGPEF-SILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQG-------YPEDFIGGMHRHFQIVGELLRHFYATLDRPRT--DASATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            G A+G +     D  P   + +  + + RAALLA +  L  Q+ EMV   ++SEE+FW +RR  +A E +K   + TG  S + +DL A++ S G + K+ LNA  IH IF  YP V  AY+  VP +M+E EFW  + +S YF RDR A                   G DD+F ++ A+E E        M Q  +V                    VDP+VDLT+   D    +       + + +  +     V KFNRH   V+ P   G   G     ++P    S +L  AT L +L          L I + ++Y  H+ GGA   G++SH      V + TL E++ +      S L +  A   + A+ D     L       D    + ASL          P +F   ++  F  V EL+RHF +   +     DA A  KL+R+ +RM +KY EL   R+ LP     N L+ ++KP  D LN AF
Sbjct:  107 GLAAGARHRSASDRTP---LCNAAEIKHRAALLASNATLKRQHTEMVNQGLISEEDFWATRRHLIANEASKR--QKTGKTSAILTDLTADSESGGNVVKYNLNAEVIHQIFIQYPAVHLAYKEQVPDKMSETEFWGAFFKSKYFYRDRKA------------------AGHDDLFTKYEAKELE--------MAQERTVD---------------PRNIVDPLVDLTTTEEDSAVHKA----IYKSMRKHVEPSSITVAKFNRHGAYVLDPTHAGKLQGPVEPPKKPRAAASESLREATVLDDLEGPQAPQYNPLTIEDDSKYFQHQEGGAD--GARSHATVPVPV-QATLEESRVQFETACASTLTLDRAFPSSKASTDVLTEILAHADSSHDATASSTASLVSGAMAADCIPNEFKKQVYTQFHDVSELMRHFLSFKAKAERGGDADAKHKLKRIVERMESKYDELVKIREALPPHEK-NLLAPLLKPFDDQLNLAF 551          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A5D6XTB9_9STRA (BSD domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTB9_9STRA)

HSP 1 Score: 150 bits (378), Expect = 9.530e-35
Identity = 179/653 (27.41%), Postives = 265/653 (40.58%), Query Frame = 0
Query:   24 KKIAGTVWFTSRRTLWR--ASDGKAP-----VQRVDVPWAAIKSFQCSPANEARAMIRLLRVTEGDPPIILRFLGSPADTPREVMERAQTAIRRAMKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKKMKWKTRKGLMGTASGGQPLRQRDSMPGGRMRDVHDARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSG-TLKFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDY---------HTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSGRRPALV----------DSAALATDLPELRQHDKVTQEKLNIANKNRYHEGGGATSAGSQSHIQPAKAVEEVTLAEAKEELGPEFSILAVRPA-ISKAVATPDQALSALRKCTKETDKGI-GNAASLQGY----------PEDFIGGMHRHFQIVGELLRHFYATLDRPRT--DASATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            KK  GT  F+ +   W   A+   AP      + V V W+ ++  Q S A   RAM+RL   T     ++L F+ + +      +E A  A+R   K                                  KW    G    +        R  +      +  + +QRAALLA +  L  Q+ EMV   ++SEE+FW SRR  LA E +K   + T   S + +DL  +  ++G  +K+ LNA  IH IF  YP V  AY+A VP +MTE EFW  + +S YF+RDR A                   G DD+F ++  +E E  R                   G A   + +    VDP+VDLTS  GD+          T++   +       + + R    + KFNRH   V+ P   G  S    A V          DS A AT L +L+         L + +++RY +         QS  Q        + A + ++    F  +   P  ++KA  +   +L  L +    ++ G+ G AA               P +F   ++  F  V ELLRHF +   +     DA A  KL ++  RM +KY EL   R+ LP     N L+ ++KP  D LN AF
Sbjct:   16 KKREGTAEFSEKALRWTPDAAPSAAPPSAEAAKPVVVLWSTVQEQQVSSATSPRAMLRLR--TAAGAALVLEFVSAQS------LEHA-FAVRDEAKELVA------------------------------KWVAASGRQRASGSAAAAAARAPLC-----NAVEIKQRAALLAANPTLKRQHTEMVNDGLISEEDFWASRRHLLAHEASKR--QRTAKTSAILTDLSGDNDAAGHVVKYNLNAEVIHQIFIQYPAVHLAYEAQVPDKMTETEFWGAFFKSKYFHRDRKA-------------------GHDDLFTKYEERERELTR-------------------GVAVDPRAV----VDPLVDLTSTEGDFSALQRALITRTQQPGGSGSGGSKDDSSDR---TIAKFNRHGAYVLDPSHAGKLSTAPDAAVAPTATRASYRDSLAEATLLDDLQSKPPPPYNPLTLEDESRYFQ--------QQSQSQGDSGDGNSSAASSLDDAAQRFRRVCSAPIPLAKAFPSARASLDILGEIVACSESGVDGGAAGXXXXXXXAMTADYIPTEFKKQVYNQFHDVNELLRHFLSFKAKVAQGGDAHAQSKLDKIVARMGSKYDELGKIRENLPPHER-NLLAPLLKPFDDQLNLAF 568          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A7S4DB33_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB33_HETAK)

HSP 1 Score: 143 bits (360), Expect = 7.010e-34
Identity = 99/265 (37.36%), Postives = 140/265 (52.83%), Query Frame = 0
Query:  210 EEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTLKFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSGRRPALVDSAAL---ATDLPELRQHDKVTQEKLNIANKNRY 471
            E +FW +R++ +A+E A   ++ TG PS + +    E  +S   KF L AR I  IF MYP V + Y+A VP EM+EKEFW KY QS +F RD GA+ P    S           G DDMF RF A+E E E+K++     A    G+       A K++L+   VDP +DLT+   DYH    D   P  +   +  +   V+ KFNRHA+LV+ PP     + +R    D A +    T+L ELR+ +    + LN+ NK +Y
Sbjct:    1 EADFWAARQKQMADEQASVNAQTTGIPSTL-NLFQTEHITSRHKKFVLTARMIRHIFLMYPAVERCYKAKVPEEMSEKEFWVKYFQSQFFLRDSGAETPDEKNSH----------GQDDMFTRFEAEEIENEKKKQSRKSAAPHSNGNN------AKKQKLDV-EVDPSIDLTATENDYHPPSTDKLFPTGDPNSKGAK---VIDKFNRHAKLVLDPPSSDISNKQRKHY-DKAKIFGEGTELLELRKEEPPAYDPLNLKNKEQY 243          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A662X0X0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0X0_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.230e-33
Identity = 185/673 (27.49%), Postives = 276/673 (41.01%), Query Frame = 0
Query:   13 EKVLITADAVH--KKIAGTVWFTSRRTLWRA-SDGKAPVQR---VDVPWAAIKSFQCSPANEARAMIRLLRVTEGDPPIILRFLGSPADTPR--EVMERAQTAIRRAMKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKKMKWKTRKGLMGTASGGQPLRQRDSMPGGRMRDVHDARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTL-KFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEA-GAVDPMVDLTSQWGD---YHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGS----------GSGRRPALV-----------DSAALATDLPELRQHDKVTQEKLNIANKNRYHE------------GGGATSAGSQSHIQPAKAVEEVTLAEAKEELGPEFSILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQGYPEDFIGGMHRHFQIVGELLRHFYA----TLDRPRTDASATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            +K+L T +A+   KK  G   F+++   W A +  +AP  +   + VPW+ ++  Q S  +  +AMIRL   T     ++L F+          E  E+A+  I R ++                                     + KG    A+               + +  + +QRAALLA +  L  Q+ EMV   ++SEE+FW SRR  +A E +K   + TG  S + +DL  +  + G + K+ LNA  IH IF  YP V+ AYQA VP +MTE EFW  + +S YF+RDR A                   G +DMF ++       E KEK+                 AA+   ++  G VDP+VDLTS   D   +H ++        +L+ +       + KFNRH   V+ P   G            S ++  L            DS A AT L +L          L + +++RY +             GG  S    +H+  A     + L  A       F +LA   A S   +T D   SA          G   A + +  P +F   ++  F  V ELLRHF +      D    DA    KL R+ ++M +KY EL   R+ LP     N L+ ++KP  D LN AF
Sbjct:   23 KKMLATMEALVRVKKRDGRAEFSAKGLRWTADASPEAPAGQHPPIVVPWSTVQDQQVSSLSSPKAMIRLRLSTNAT--LVLEFVAESGSLEEAFEAREQAKDFIARCIRESGA---------------------------------SNKGARSNAAA--------------LCNATEIKQRAALLAANPTLKRQHTEMVNDGLISEEDFWASRRHLIAAEASKR--QKTGKTSAILTDLAGDNDTGGNVVKYNLNAEVIHQIFIQYPAVYMAYQAQVPDKMTETEFWGAFFKSKYFHRDRKA-------------------GHEDMFTKY-------EEKEKE-----------------AATGVSIDPRGLVDPLVDLTSTDEDVAVHHDKK--------QLSGKENPFSITIAKFNRHGAYVLDPVHAGKLQKQQLTTEKTSTQQETLQQQKKKPKAGYHDSLADATLLDDLVDKAPPPSNPLTLEDESRYFQHAEKGSSAESNGSGGKLSLEDAAHVFQATCKAPIPLENAYPSAKTCFDVLAEVVACSD--STSD---SAXXXXAANLASG---ALAAEYIPSEFKKQVYNQFHDVCELLRHFLSFKAKVADGGGPDAQR--KLNRIVEKMGSKYDELVKLRESLPPHEK-NLLAPLLKPFDDQLNLAF 582          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A421FK41_9STRA (BSD domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FK41_9STRA)

HSP 1 Score: 144 bits (362), Expect = 6.980e-33
Identity = 144/484 (29.75%), Postives = 218/484 (45.04%), Query Frame = 0
Query:  181 DARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTL-KFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGD---YHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSGRRPA------------LVDSAALATDLPELRQHDKVTQEKLNIANKNRYHE----GGGA--TSAGSQSHIQPAKAVEE-----VTLAEAKEELGPEFSILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQGYPEDFIGGMHRHFQIVGELLRHF--YATLDRPRTDASATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            + +QRAALLA +  L  Q+ EMV   ++SEE+FW SRR  +A E +K   + TG  S + +DL A+  ++G + K+ LNA  IH IF  YP V+ AYQ  VP +MTE EFW  + +S YF+RDR A                   G +DMF ++       E KEK+                 A        G VDP++DLT+   D   +H+++        +LT +       + KFNRH+  V+ P   G    ++ A              D+   AT L +L + D      L + +++RY +    G GA   + G  S +  A+  +      + L  A       F++LA   A S + +    A SA    +         A + +  P +F   ++  F  V ELLRHF  + T         A  KL ++ ++M +KY EL   R+ LP     + L+ ++KP  D LN AF
Sbjct:  102 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKA-------------------GHEDMFTKY-------EEKEKE----------------VAKGVSIDPRGIVDPLIDLTTTEEDALIHHSKK--------QLTGKENPLSITIAKFNRHSAYVLDPAHAGKLQQQKAAEKQPQKKKPKSGYHDNVEEATLLDDLAKKDPPPYNPLTLEDESRYFQHAEKGSGADGNTHGKLSLMDAAQVFQTTCKAPIPLENAYPTSKTCFNVLAEVVACSDSTSDSASASSAANLAS--------GALAAEYIPNEFKKQVYNQFHDVCELLRHFLSFKTKVAEGGGPEAQRKLNKIVEKMGSKYDELVKLRESLPPHEK-SLLAPLLKPFDDQLNLAF 524          
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Match: A0A3M6VFX3_9STRA (BSD domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFX3_9STRA)

HSP 1 Score: 144 bits (362), Expect = 4.610e-32
Identity = 179/655 (27.33%), Postives = 265/655 (40.46%), Query Frame = 0
Query:   24 KKIAGTVWFTSRRTLWR-------ASDGKAPVQRVDVPWAAIKSFQCSPANEARAMIRLLRVTEGDPPIILRFLGSPADTPR--EVMERAQTAIRRAMKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKKMKWKTRKGLMGTASGGQPLRQRDSMPGGRMRDVHDARQRAALLAGDDVLTAQYKEMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSSGTL-KFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFNRDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQAGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGD---YHTREVDDADPAEELTEEAKRRKEVVGKFNRHARLVMQPPDGG------SGSGR------------RPALVDSAALATDLPELRQHDKVTQEKLNIANKNRYHEGGG-ATSAGSQSHIQPAKAVEEVTLAEAKEELGPE---------FSILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQGYPEDFIGGMHRHFQIVGELLRHFYATLDRPRTDAS--ATVKLQRLEDRMTAKYQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAF 635
            KK  G   F+ +   W        A+   AP+    VPW+ ++  Q S     +AMIRL R+      ++L F+          EV E+A+  I R ++                                        G  GT S    L            +  + +QRAALLA +  L  Q+ EMV   ++SEE+FW SRR  +A E +K   + TG  S + +DL  +  ++G + K+ LNA  IH IF  YP V+ AYQ  VP +MTE EFW  + +S YF+RDR A                   G +DMF  +       E KEK+E              G +   +    G VDP++DLT    D   +HT+         + TE+       + KFNRH   V+ P   G      +G GR            +    DS   AT L +L   D      L + +++RY +     T+ G+ +   P     ++  A  K  +  E         F++LA   A S + +    A SA    +       G  A+    P +F   ++  F  V ELLRHF +   +        A  KL ++ ++M +KY EL   R+ LP     N L+ ++KP  D LN AF
Sbjct:  248 KKRDGRAEFSLKGLRWEEDASPETAAGKHAPIV---VPWSTVQDQQVSSLTSPKAMIRL-RLAHNST-LVLEFVAESGSLEEAFEVREQAKDFIARRLR--------------------------------------ENGARGTRSNAAAL-----------CNPTEIKQRAALLAANPALKRQHIEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLATDNDAAGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKA-------------------GHEDMFTTY-------EEKEKEESK------------GVSVDPR----GIVDPLIDLTMTEEDAAVHHTKR--------QTTEKENPFSITIAKFNRHGAYVLDPAHAGKLLPQKAGRGRNAQQTLPQKKKPKAGYHDSLEEATLLDDLHDQDPPPYNPLTLEDESRYFQHAEKGTADGNTTRQLPLSDAAQMFQATCKAPIKLENAYPSSKTCFNVLAEVVACSDSTSDSASASSAANLTS-------GKLAA-DYIPNEFKKQVYNQFHDVCELLRHFLSFKVKVAEGGGPEAQRKLNKIVEKMGSKYDELVKLRESLPPHEK-NLLAPLLKPFDDQLNLAF 787          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig966.20980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT0_ECTSI2.270e-23858.27TFIIH subunit (Partial) (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JXC6_9PHAE7.320e-20056.91BSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YZ40_9STRA2.930e-6935.76BSD domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A8K1C257_PYTOL4.150e-3927.32Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CGY8_PYTIN4.250e-3530.66General transcription factor IIH subunit, putative... [more]
A0A5D6XTB9_9STRA9.530e-3527.41BSD domain-containing protein n=1 Tax=Pythium bras... [more]
A0A7S4DB33_HETAK7.010e-3437.36Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A662X0X0_9STRA2.230e-3327.49Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A421FK41_9STRA6.980e-3329.75BSD domain-containing protein n=2 Tax=Phytophthora... [more]
A0A3M6VFX3_9STRA4.610e-3227.33BSD domain-containing protein n=2 Tax=Peronospora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 590..610
NoneNo IPR availableCOILSCoilCoilcoord: 331..351
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 12..79
NoneNo IPR availableSUPERFAMILY140383BSD domain-likecoord: 179..218
IPR005607BSD domainSMARTSM00751wurzfinal6coord: 249..301
e-value: 3.6E-6
score: 36.5
IPR005607BSD domainPFAMPF03909BSDcoord: 254..303
e-value: 1.4E-9
score: 37.8
IPR005607BSD domainPROSITEPS50858BSDcoord: 249..301
score: 10.958
IPR013876TFIIH p62 subunit, N-terminalPFAMPF08567PH_TFIIHcoord: 23..108
e-value: 1.9E-11
score: 44.1
IPR027079TFIIH subunit Tfb1/GTF2H1PANTHERPTHR12856TRANSCRIPTION INITIATION FACTOR IIH-RELATEDcoord: 15..644

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig966contigF-serratus_M_contig966:70178..76216 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig966.20980.1mRNA_F-serratus_M_contig966.20980.1Fucus serratus malemRNAF-serratus_M_contig966 70025..76678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig966.20980.1 ID=prot_F-serratus_M_contig966.20980.1|Name=mRNA_F-serratus_M_contig966.20980.1|organism=Fucus serratus male|type=polypeptide|length=691bp
MAAIAGPALGAGEKVLITADAVHKKIAGTVWFTSRRTLWRASDGKAPVQR
VDVPWAAIKSFQCSPANEARAMIRLLRVTEGDPPIILRFLGSPADTPREV
MERAQTAIRRAMKGDVEGDVEGEKGSEEAGTANGGKGGKNGGPSKKMKWK
TRKGLMGTASGGQPLRQRDSMPGGRMRDVHDARQRAALLAGDDVLTAQYK
EMVEGNVVSEEEFWESRRRTLAEEDAKSASRHTGTPSDMPSDLVAETTSS
GTLKFKLNARTIHSIFTMYPVVFKAYQANVPTEMTEKEFWTKYVQSAYFN
RDRGADGPSSSMSGNKRKSAVAGGGADDMFLRFAAQEAERERKEKDEMLQ
AGSVQGSRGGGGTAASKKRLEAGAVDPMVDLTSQWGDYHTREVDDADPAE
ELTEEAKRRKEVVGKFNRHARLVMQPPDGGSGSGRRPALVDSAALATDLP
ELRQHDKVTQEKLNIANKNRYHEGGGATSAGSQSHIQPAKAVEEVTLAEA
KEELGPEFSILAVRPAISKAVATPDQALSALRKCTKETDKGIGNAASLQG
YPEDFIGGMHRHFQIVGELLRHFYATLDRPRTDASATVKLQRLEDRMTAK
YQELNGERKRLPRDATGNRLSAVIKPLMDCLNHAFEKSEERKRRGPGGAR
KAGANTGGWVRADEDDDDEEEEEDEDDEEQELRGGWSVVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005607BSD_dom
IPR013876TFIIH_BTF_p62_N
IPR027079Tfb1/GTF2H1