prot_F-serratus_M_contig966.20977.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig966.20977.1
Unique Nameprot_F-serratus_M_contig966.20977.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length861
Homology
BLAST of mRNA_F-serratus_M_contig966.20977.1 vs. uniprot
Match: A0A7S1LNS8_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LNS8_ALECA)

HSP 1 Score: 112 bits (281), Expect = 4.770e-25
Identity = 64/145 (44.14%), Postives = 88/145 (60.69%), Query Frame = 0
Query:   11 EKKLQNALRECQKRPE-NKRCADCKERLPQWVVTDFNTFVCTACSGIHREFSHRVKSISLATFSEDEVAGVKAGGNEVNNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDRRWYATPEDLEKDAQREKEREAARAKRDADR 154
            EK L + +R  Q+  + NK+CADCKE  P ++   F TFVCT CSG+HREFSH+VK IS++ ++ +EV  ++ GGN      ++AR+ P  D PEP+     K R+FIR KYVDRRW     D     +R   R+    +RD DR
Sbjct:    6 EKNLVDRIRAFQRSEKANKKCADCKEVGPTYICLSFTTFVCTTCSGLHREFSHKVKGISVSKWTPEEVEEIERGGNARAADKWLARWDP-RDYPEPDSSDQSKCRDFIRMKYVDRRWVERDGDSRGPDRRN--RDEGETRRDGDR 147          
BLAST of mRNA_F-serratus_M_contig966.20977.1 vs. uniprot
Match: A0A0P1AU20_PLAHL (Predicted GTPase-activating protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AU20_PLAHL)

HSP 1 Score: 122 bits (306), Expect = 5.570e-25
Identity = 66/124 (53.23%), Postives = 84/124 (67.74%), Query Frame = 0
Query:    6 SAERLEKKLQNALRECQKR-PENKRCADCKERLPQWVVTDFNTFVCTACSGIHREFSHRVKSISLATFSEDEVAG-VKAGGNEVNNKLYMARYRPGHDLPEPEGGR-AEKHREFIRTKYVDRRW 126
            S ER E++L   LR+ Q+  P NKRC DC E +PQ+V  DFNTFVCTACSGIHREF+HRVKSIS++ F+E EV   +K GGNE   K + +++ P      P GG   E+ R FIR  Y+DR+W
Sbjct:    7 SEERQEERLIQDLRDFQRSIPANKRCFDCNEMMPQYVCLDFNTFVCTACSGIHREFAHRVKSISMSKFTESEVKNMIKRGGNEAAQKFWRSKHDPSF---RPNGGTDGERTRNFIRLTYIDRKW 127          
BLAST of mRNA_F-serratus_M_contig966.20977.1 vs. uniprot
Match: A0A2D4BWU4_PYTIN (Arf-GAP domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWU4_PYTIN)

HSP 1 Score: 115 bits (288), Expect = 6.100e-25
Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 0
Query:   25 PENKRCADCKERLPQWVVTDFNTFVCTACSGIHREFSHRVKSISLATFSEDEVAG-VKAGGNEVNNKLYMARYRPGHDLPEPEGGR-AEKHREFIRTKYVDRRW-YATPEDLEKD 136
            P NKRC DC E +PQ++  DFNTFVCT+CSGIHREF+HR+KSIS++ F++ EV   +K GGNE   K++ A++   +    P GG   E+ R FIR  Y+DR+W Y +P++   D
Sbjct:   27 PANKRCFDCNEMMPQYICLDFNTFVCTSCSGIHREFAHRIKSISMSKFTDTEVKNMIKFGGNEAAQKIWRAKHDASY---RPSGGNDGERIRNFIRLTYIDRKWAYESPKNSSHD 138          
BLAST of mRNA_F-serratus_M_contig966.20977.1 vs. uniprot
Match: A0A7J6QZC8_PEROL (Arf-GAP domain-containing protein n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QZC8_PEROL)

HSP 1 Score: 120 bits (300), Expect = 1.010e-24
Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 0
Query:   27 NKRCADCKERLPQWVVTDFNTFVCTACSGIHREFSHRVKSISLATFSEDEVAGVKAGGNEVNNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDRRWYATPED 132
            N+ CADC E  P ++ TDF TFVCT C+GIHRE +H+VK IS++ ++E EV  ++A GN  + + YMA YRPG DL EP     ++ ++F++ KYVD+RW  TP D
Sbjct:   29 NRHCADCGELGPTYICTDFGTFVCTECAGIHRELNHKVKGISVSKWTEQEVENLEAHGNTKDRETYMANYRPGIDLAEPNNQDRQRLKDFMKLKYVDKRWAGTPPD 134          
BLAST of mRNA_F-serratus_M_contig966.20977.1 vs. uniprot
Match: A0A5E4EH42_PRUDU (PREDICTED: probable ADP-ribosylation factor n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4EH42_PRUDU)

HSP 1 Score: 111 bits (277), Expect = 1.240e-24
Identity = 52/116 (44.83%), Postives = 79/116 (68.10%), Query Frame = 0
Query:   11 EKKLQNALRECQKRPENKRCADCKERLPQWVVTDFNTFVCTACSGIHREFSHRVKSISLATFSEDEVAGVKAGGNEVNNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDRRW 126
            ++K++  +R   K P+NKRC +C    PQ+V T F TFVCT CSG+HREF+HRVKS+S+A F+ +EV+ ++AGGNE   ++Y   + P +    P+G    + R+FI+  YVDR++
Sbjct:    8 DEKIERTIRTLLKHPQNKRCINCNSLGPQYVCTTFLTFVCTNCSGVHREFTHRVKSVSMAKFNAEEVSALQAGGNERARQIYFKEWDPQYHAY-PDGSNLHRLRDFIKHVYVDRKY 122          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig966.20977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1LNS8_ALECA4.770e-2544.14Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A0P1AU20_PLAHL5.570e-2553.23Predicted GTPase-activating protein n=1 Tax=Plasmo... [more]
A0A2D4BWU4_PYTIN6.100e-2549.57Arf-GAP domain-containing protein n=2 Tax=Pythium ... [more]
A0A7J6QZC8_PEROL1.010e-2450.00Arf-GAP domain-containing protein n=4 Tax=Perkinsu... [more]
A0A5E4EH42_PRUDU1.240e-2444.83PREDICTED: probable ADP-ribosylation factor n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..24
NoneNo IPR availableCOILSCoilCoilcoord: 138..158
NoneNo IPR availablePANTHERPTHR46085FAMILY NOT NAMEDcoord: 9..646
NoneNo IPR availablePANTHERPTHR46085:SF3coord: 9..646
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 27..46
score: 34.66
coord: 64..85
score: 32.29
coord: 46..63
score: 37.36
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 15..135
e-value: 2.5E-20
score: 83.5
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 16..128
e-value: 2.5E-28
score: 98.5
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 12..135
score: 18.677
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 2..134
e-value: 2.5E-31
score: 110.3
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 15..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig966contigF-serratus_M_contig966:27537..48982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig966.20977.1mRNA_F-serratus_M_contig966.20977.1Fucus serratus malemRNAF-serratus_M_contig966 26718..49244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig966.20977.1 ID=prot_F-serratus_M_contig966.20977.1|Name=mRNA_F-serratus_M_contig966.20977.1|organism=Fucus serratus male|type=polypeptide|length=861bp
MSSSRSAERLEKKLQNALRECQKRPENKRCADCKERLPQWVVTDFNTFVC
TACSGIHREFSHRVKSISLATFSEDEVAGVKAGGNEVNNKLYMARYRPGH
DLPEPEGGRAEKHREFIRTKYVDRRWYATPEDLEKDAQREKEREAARAKR
DADRGKRDSASGGRGAVPKKPERASGGSAGRARRVSSNRGLRKVDPPKAG
GVAAAVKPPPAPKKQVDLLDFLSDGPAPAPGPALGPAQVQAPPPAQQWAA
FSGGESAAGAIAPPLAPPATGETPSFASWAAFGDAPAASQQQPPQQKQPQ
QAPSFAFQDGSTTQAQPASGSTSTAFSFSTNFPATANADMGQQQKQQHQP
WSQQQVSTVPAPAGLPQAGFPQAGSHDQQPQPPQHRAALGAQATSNGGLS
GTLPTVATLRPPPSPNATLFQAKPQPQPQQGFVQSGGDFTMSGARMSAPG
TPVQQPQQVGVFSSGPPAVSGGSAGGFLNGGNAGTGFATSFEGLSLSSPA
AGGVVAQQGGQGFPPHGHQRSGSQQGAIFPQGAGQPQASYNPGAGHLQHS
AFFGGGITPQQTPAHQPQHQAFAAFGQQPPFHQHPVGLPQYPQQQQQPQL
QPHFQGPPGNGQGMQQHQQQQIPQYPSPYQQQAAEGMGMGPSGPVQPPPA
AGVDPFAELAEGGGNGAGATGNGSSQEPPFRKGDEVLYIRGSDPPLEGVI
QKVHAEEYPPYYTVLISVTGREKNTDAAHLRHKKEVNEGVSNGRGHLNEQ
QRAGPDAFASLGAGAWRSTSTGATAVAAAPVRQQAGPQQPQVAPQQAGPH
HATKQPAFAQRQEAMPSAGVGMAGGGGNPFRGIESPGLTAATGIAAGAAE
QAGGNPFDMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO