prot_F-serratus_M_contig965.20973.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig965.20973.1
Unique Nameprot_F-serratus_M_contig965.20973.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length486
Homology
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: A0A024GT29_9STRA (PAS_3 domain-containing protein n=5 Tax=Albugo candida TaxID=65357 RepID=A0A024GT29_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.820e-8
Identity = 50/131 (38.17%), Postives = 74/131 (56.49%), Query Frame = 0
Query:  281 RERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNA-VFTFASGGFDRLLGMDPTELL--GVSFLELVDPNDSQEVLRSVLATLRRGGIRQVQYRMRPPAGAHAAEVETSFRLVS 408
            RERNRDHSR+SR RKK +VE LK++V +L  Y+ L E+  DLI+  ST++   +FT+ S  + RLLG +   ++    SFL+ V   D  +V R   A           +R++   G++    ETS R+ S
Sbjct:  301 RERNRDHSRKSRLRKKEFVENLKQEVQQLHIYQELCEQCCDLIALLSTEIPGYIFTYRSTAYARLLGYEMESIVIGHSSFLDFVHSGDLPDVSRQFEALSGPRDFTSFTFRIKMANGSYF-RAETSARVGS 430          
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: A0A067CFE3_SAPPC (PAS domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFE3_SAPPC)

HSP 1 Score: 67.4 bits (163), Expect = 2.320e-8
Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 0
Query:  281 RERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLG--VSFLELVDPN 364
            RERNRDHSR+SR RKK +VE LK++V +L  Y+ LV++  DLI+  + D +    +A+  F R+LG    +L+   VSF ELV P+
Sbjct:  294 RERNRDHSRKSRLRKKVFVETLKQEVKQLQIYKDLVDQNPDLIALVTADHDRKMLYATASFSRVLGYPEKKLMADSVSFFELVHPD 379          
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: W4FL11_9STRA (PAS domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FL11_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.520e-8
Identity = 49/140 (35.00%), Postives = 78/140 (55.71%), Query Frame = 0
Query:  281 RERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELL--GVSFLELVDPNDSQEVLRSVLATLRRGGIRQVQYRMRPPAGAHAAEVETSFRLVSTRLVAVTRVR 418
            RERNRDHSR+SR RKKA+VE LK +V +L  Y+ L E+  DLI+  S D +   T+ +  ++R+LG    +++   VS  +L+ P+D   V   +    +   I  V Y+ +   G +  + E + R+    +V  TRV+
Sbjct:  332 RERNRDHSRKSRLRKKAFVECLKTEVKQLQMYKDLCEQNADLIAMVSLDQDRKVTYLTASYNRVLGYHEKKVVHDDVSMFDLMHPDDVARVRSELNRVTKYQDILGVPYQPKHSKGMYW-KGELNARMCDQGIVLTTRVQ 470          
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: M4BWF2_HYAAE (PAS domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BWF2_HYAAE)

HSP 1 Score: 65.9 bits (159), Expect = 5.480e-8
Identity = 41/102 (40.20%), Postives = 65/102 (63.73%), Query Frame = 0
Query:  264 SEESLRDLTPEERLKLNRERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLG--VSFLELVDP 363
            SE+  + L  EE+   +RERNRDHSR+SR RKK +VE LK +V +L  Y+ + E++ D I+    + +AVF ++S  + R+LG    +++    SFL++V P
Sbjct:  268 SEDEKQALIKEEK---SRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQSMDCIALVVAEASAVFLYSSAAYTRVLGYQNHQIVPGQTSFLDMVHP 366          
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: A0A1V9YM63_9STRA (PAS domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YM63_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 9.180e-8
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 0
Query:  281 RERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLG--VSFLELVDPN 364
            RERNRDHSR+SR RKKA+VE LK++V +L  Y+ LV++  DLI+  + D +    F +  F R+LG    +L+    SF +LV P+
Sbjct:  281 RERNRDHSRKSRLRKKAFVECLKQEVKQLQIYKDLVDQNPDLIALVTMDHDRKIIFVTAAFSRVLGYQDKKLIAESTSFFDLVHPD 366          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A024GT29_9STRA1.820e-838.17PAS_3 domain-containing protein n=5 Tax=Albugo can... [more]
A0A067CFE3_SAPPC2.320e-846.51PAS domain-containing protein n=2 Tax=Saprolegnia ... [more]
W4FL11_9STRA2.520e-835.00PAS domain-containing protein n=5 Tax=Aphanomyces ... [more]
M4BWF2_HYAAE5.480e-840.20PAS domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A1V9YM63_9STRA9.180e-845.35PAS domain-containing protein n=1 Tax=Achlya hypog... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000014PAS domainSMARTSM00091pas_2coord: 310..378
e-value: 6.8E-6
score: 35.6
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 311..386
e-value: 2.1E-6
score: 25.8
IPR000014PAS domainPROSITEPS50112PAScoord: 329..380
score: 12.26
NoneNo IPR availableGENE3D3.30.450.20coord: 323..419
e-value: 3.7E-11
score: 44.7
NoneNo IPR availableGENE3D1.20.5.170coord: 278..322
e-value: 2.1E-5
score: 26.4
IPR013655PAS fold-3PFAMPF08447PAS_3coord: 335..395
e-value: 5.5E-6
score: 26.6
IPR004827Basic-leucine zipper domainPFAMPF07716bZIP_2coord: 281..312
e-value: 3.7E-5
score: 23.7
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 316..395

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig965contigF-serratus_M_contig965:185264..191492 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig965.20973.1mRNA_F-serratus_M_contig965.20973.1Fucus serratus malemRNAF-serratus_M_contig965 183857..191533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig965.20973.1 ID=prot_F-serratus_M_contig965.20973.1|Name=mRNA_F-serratus_M_contig965.20973.1|organism=Fucus serratus male|type=polypeptide|length=486bp
MMGSSPSYSPHIEGHQHHVGKRGDPHNHSQGRSALSGMWPSSQGHFNDEW
GALLGRPSTPTSQPQQMSGGFSTPAWTPLHNMAEKPWNTQPHVQHYGRQA
HLHQHQQQVDKASRRDAQEAQQQQQQQPRHLANGWASTRPRPLSPQNTRD
AIEMNSLRPSSVHSAQATHAALAAANAVGMDSGDRGSSSTQEEAASGGGG
LTKASIRPPSGVQVDVRRPNKLPRTAEGNREEERDAGGCGGGVKADGTGG
GGAAKTSASRRRPSEESLRDLTPEERLKLNRERNRDHSRRSRERKKAYVE
GLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPT
ELLGVSFLELVDPNDSQEVLRSVLATLRRGGIRQVQYRMRPPAGAHAAEV
ETSFRLVSTRLVAVTRVRGRSPSPCDALPPPSSALPSLSITSAPGSSHGP
PPSPLLVQPLPPVSGIRVDGGAGGLSLPADFSSEW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR013655PAS_fold_3
IPR004827bZIP
IPR035965PAS-like_dom_sf