prot_F-serratus_M_contig965.20972.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig965.20972.1
Unique Nameprot_F-serratus_M_contig965.20972.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length155
Homology
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BLAST of mRNA_F-serratus_M_contig965.20972.1 vs. uniprot
Match: A0A6H5JTL3_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL3_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 4.800e-6
Identity = 40/115 (34.78%), Postives = 56/115 (48.70%), Query Frame = 0 
Query:   11 RQDVDELATMGTYDDVADDDVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLSMGWFRGVITRKAQARTSDRCDFRVFLETDGSTRSVKLPLVKYSVDGAAAEGSWALLSRCA 125
            R  VDEL+ +   D +  DD +  +E+P G+ + ++ PAAL  +L+             RG        RT    D+R+ LE D  TRS+KLPL KYS D  A  GS  +    A
Sbjct:  299 RGQVDELSVVDEDDSMGPDDEIRGMEIPNGFRVQASKPAALDSSLLQ------------RG-------ERTRHLYDYRLHLELDQRTRSMKLPLGKYSGDPDAQWGSGCVAKALA 394
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BLAST of mRNA_F-serratus_M_contig965.20972.1 vs. uniprot
Match: D8LRF1_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF1_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 5.130e-6
Identity = 25/69 (36.23%), Postives = 45/69 (65.22%), Query Frame = 0 
Query:   11 RQDVDELATMGTYDDVADDDVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLSMGWFRGVITRKAQA 79
            R  +DEL+ +   D +  DD    +E+P G+ + ++ PAAL  +L+ + +L+ L MGWF G+ITR++++
Sbjct:  634 RDQMDELSLVDDDDSMESDDETHGMEIPDGFHIQASTPAALDSSLLQRGVLVGLGMGWFGGLITRQSRS 702
[Close]
BLAST of mRNA_F-serratus_M_contig965.20972.1 vs. uniprot
Match: A0A6H5JS09_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS09_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 3.270e-5
Identity = 25/64 (39.06%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:   14 VDELATMGTYDDVADDDVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLSMGWFRGVITRKA 77
            +DEL+ +   D +  DD +  +E+P G+ + ++ PAAL  +L+   +L RL MGWF G ITR++
Sbjct:  433 MDELSLVADDDRMESDDEIHAMEIPDGFRVQASTPAALDSSLLQLGVLGRLGMGWFGGAITRQS 496
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig965.20972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5JTL3_9PHAE4.800e-634.78DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LRF1_ECTSI5.130e-636.23C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JS09_9PHAE3.270e-539.06DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig965contigF-serratus_M_contig965:160076..160540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig965.20972.1mRNA_F-serratus_M_contig965.20972.1Fucus serratus malemRNAF-serratus_M_contig965 160076..160540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig965.20972.1 ID=prot_F-serratus_M_contig965.20972.1|Name=mRNA_F-serratus_M_contig965.20972.1|organism=Fucus serratus male|type=polypeptide|length=155bp
GVKSGGGGRPRQDVDELATMGTYDDVADDDVLLPLEVPAGYSLVSTAPAA
LTRALVHQEILLRLSMGWFRGVITRKAQARTSDRCDFRVFLETDGSTRSV
KLPLVKYSVDGAAAEGSWALLSRCADDGSSEDSDSEDENEFINIVQESGG
GSRW*
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