prot_F-serratus_M_contig965.20970.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig965.20970.1
Unique Nameprot_F-serratus_M_contig965.20970.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length410
Homology
BLAST of mRNA_F-serratus_M_contig965.20970.1 vs. uniprot
Match: A0A7L0KF43_CHATO (WDR31 protein (Fragment) n=1 Tax=Chauna torquata TaxID=30388 RepID=A0A7L0KF43_CHATO)

HSP 1 Score: 87.0 bits (214), Expect = 2.910e-15
Identity = 56/154 (36.36%), Postives = 73/154 (47.40%), Query Frame = 0
Query:  221 TIKGYIYFPLCLDVSKYGPEVLTSSKGFDGEGCEAKLWDLRQTSSPVREYTGHTQDTTSCVFFHGNDKSAGACEVERRDEPWPVGGIPARRMIATASKDGTIKMYDLDTGDILVDHVEHDCGGYTGLALGENGSTGHPLLYATTITGGLYALRL 374
            T  G  +     DVS+ G  VL+SS GF GEGCEA LWDLRQT + VREY GH Q TTSCVF                       G      IAT+S D  +K++D DTG  L        G    LA+ ++ +     L   +   G++ L++
Sbjct:  207 TFPGKQHIQTSCDVSQDGRYVLSSSSGFAGEGCEATLWDLRQTRNRVREYKGHFQTTTSCVFLPR--------------------GPALTPSIATSSYDSKVKVWDQDTGACLATACLEGAGPLASLAVCDSST-----LLCASFNSGIHLLQM 335          
BLAST of mRNA_F-serratus_M_contig965.20970.1 vs. uniprot
Match: A0A067CE75_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CE75_SAPPC)

HSP 1 Score: 86.7 bits (213), Expect = 3.390e-15
Identity = 48/151 (31.79%), Postives = 77/151 (50.99%), Query Frame = 0
Query:  217 TPVLTIKGYIYFPLCLDVSKYGPEVLTSSKGFDGEGCEAKLWDLRQTSSPVREYTGHTQDTTSCVFFHGNDKSAGACEVERRDEPWPVGGIPARRMIATASKDGTIKMYDLDTGDILVDHVEHDCGGYTGLALGENGSTGHPLLYATTITG 367
            +P  TI+GY+YFPL +D S  G  +LTSSKGF+G GCE ++WD R+T   V E   H QD T+C +    +  A                        TASKD ++++++  +G+++    +   G +TG+A     S+    ++ T+  G
Sbjct:  201 SPAQTIQGYVYFPLSIDASDDGNYLLTSSKGFNGVGCEGRVWD-RRTGKLVTEMHVHLQDATACAYVRHKNAFA-----------------------VTASKDSSLRIWNSASGELVASSFDQSSGMFTGVACQSLESSDVVRVFTTSFAG 327          
BLAST of mRNA_F-serratus_M_contig965.20970.1 vs. uniprot
Match: A0A0P1AEA5_PLAHL (Wd repeat-containing protein 31-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEA5_PLAHL)

HSP 1 Score: 86.7 bits (213), Expect = 4.550e-15
Identity = 52/114 (45.61%), Postives = 67/114 (58.77%), Query Frame = 0
Query:  218 PVLTIKGYIYFPLCLDVSKY--GPEVLTSSKGFDGEGCEAKLWDLRQTSSPVREYTGHTQDTTSCVFFHGNDKSAGACEVERRDEPWPVGGIPARRMIATASKDGTIKMYDLDT 329
            PV  + G++YFPL + VS       +LTSSKGF+G GCEA++WD R+T   V E  GH QDTT+C F      S+   +VE R  P     IP      TASKDGT+K++D  T
Sbjct:  223 PVQLLLGFVYFPLSIAVSSEIDSTYLLTSSKGFNGVGCEARVWD-RRTGKQVVELQGHQQDTTACCFLSDTAFSS-EIDVEARTMPT----IPV-----TASKDGTVKVWDTKT 325          
BLAST of mRNA_F-serratus_M_contig965.20970.1 vs. uniprot
Match: A0A1V9YTZ2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTZ2_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 5.380e-15
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 0
Query:  218 PVLTIKGYIYFPLCLDVSKYGPEVLTSSKGFDGEGCEAKLWDLRQTSSPVREYTGHTQDTTSCVFFHGNDKSAGACEVERRDEPWPVGGIPARRMIA-TASKDGTIKMYDLDTGDILVDHVEHDCGGYTGLA 348
            P   I+GY+YFPL LD+S  G  +LTSSKGF+G GCE ++WD R+T   + E TGH QDTT+C F                        IP     A TASKD +I++++   G ++      + G +T ++
Sbjct:  207 PAQIIEGYVYFPLSLDISDDGNYILTSSKGFNGVGCEGRVWD-RRTGRQICEMTGHIQDTTACTF------------------------IPQCNAYAITASKDSSIRVWNARDGCLISTSHHPNAGMFTSVS 313          
BLAST of mRNA_F-serratus_M_contig965.20970.1 vs. uniprot
Match: A0A091PMB9_LEPDC (WD repeat-containing protein 31 n=6 Tax=Neognathae TaxID=8825 RepID=A0A091PMB9_LEPDC)

HSP 1 Score: 85.9 bits (211), Expect = 6.770e-15
Identity = 56/151 (37.09%), Postives = 72/151 (47.68%), Query Frame = 0
Query:  231 CLDVSKYGPEVLTSSKGFDGEGCEAKLWDLRQTSSPVREYTGHTQDTTSCVFFHGNDKSAGACEVERRDEPWPVGGIPARRMIATASKDGTIKMYDLDTGDILVDHVEHDCGGYTGLALGENGSTGHPLLYATTITGGLYALRLEAGGAVA 381
            C D S+ G   L+SS G  GEG EA LWDLRQT + VREY GH Q TTSCVF                       G      IAT+S D T+K++D DTG  L        G    LA+ ++ +     L   ++  G++ LRL  G  +A
Sbjct:  211 CCDASQDGRYCLSSSSGSAGEGGEATLWDLRQTRNRVREYKGHFQTTTSCVFL--------------------AQGPALAPSIATSSYDSTVKVWDRDTGACLATLCLEGSGPLASLAVCDSST-----LLCASLNSGIHVLRLRDGADLA 336          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig965.20970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7L0KF43_CHATO2.910e-1536.36WDR31 protein (Fragment) n=1 Tax=Chauna torquata T... [more]
A0A067CE75_SAPPC3.390e-1531.79Uncharacterized protein (Fragment) n=1 Tax=Saprole... [more]
A0A0P1AEA5_PLAHL4.550e-1545.61Wd repeat-containing protein 31-like n=1 Tax=Plasm... [more]
A0A1V9YTZ2_9STRA5.380e-1537.12Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A091PMB9_LEPDC6.770e-1537.09WD repeat-containing protein 31 n=6 Tax=Neognathae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 152..166
score: 36.16
coord: 107..121
score: 37.71
coord: 313..327
score: 31.38
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 36..74
e-value: 17.0
score: 9.3
coord: 215..259
e-value: 94.0
score: 4.6
coord: 168..210
e-value: 8.2
score: 11.2
coord: 81..120
e-value: 0.0015
score: 27.8
coord: 126..165
e-value: 1.0E-6
score: 38.3
coord: 263..326
e-value: 1.9E-5
score: 34.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 87..120
e-value: 0.015
score: 16.1
coord: 265..326
e-value: 0.048
score: 14.5
coord: 131..165
e-value: 3.4E-4
score: 21.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 88..120
score: 11.01
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 133..174
score: 14.084
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 35..171
e-value: 6.6E-21
score: 76.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 176..341
e-value: 4.8E-20
score: 74.2
IPR040066WD repeat-containing protein 31PANTHERPTHR19869SPERMATID WD-REPEAT PROTEINcoord: 35..376
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 152..166
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 88..219
score: 23.598
IPR011044Quinoprotein amine dehydrogenase, beta chain-likeSUPERFAMILY50969YVTN repeat-like/Quinoprotein amine dehydrogenasecoord: 308..391
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 61..340

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig965contigF-serratus_M_contig965:100780..108491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig965.20970.1mRNA_F-serratus_M_contig965.20970.1Fucus serratus malemRNAF-serratus_M_contig965 100370..108516 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig965.20970.1 ID=prot_F-serratus_M_contig965.20970.1|Name=mRNA_F-serratus_M_contig965.20970.1|organism=Fucus serratus male|type=polypeptide|length=410bp
MGPCSSRESKGPEITRLNAKRCYKAKSSGSLVGERSDGAVENRAVHHGAI
LGVTSTVEGEFLTCGEDKTLRLHSHVGGLGSFRQRVSFVGHTKAVSRTIY
GTATNRIFSCSRDTTVRLWDRSGCSENSSARVFQGHTLACTALALNADER
ILCSGSRDTSLRMWDVETGACTVKVREPRNIVTCLKYLASESSSSAVVQG
GEDLRLRVWDSRQGGLTPVLTIKGYIYFPLCLDVSKYGPEVLTSSKGFDG
EGCEAKLWDLRQTSSPVREYTGHTQDTTSCVFFHGNDKSAGACEVERRDE
PWPVGGIPARRMIATASKDGTIKMYDLDTGDILVDHVEHDCGGYTGLALG
ENGSTGHPLLYATTITGGLYALRLEAGGAVATMAEDKEVKGMKLLRLRTI
GFVQGIAIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040066WDR31
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR011044Quino_amine_DH_bsu
IPR036322WD40_repeat_dom_sf