prot_F-serratus_M_contig964.20965.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig964.20965.1
Unique Nameprot_F-serratus_M_contig964.20965.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length216
Homology
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5KF18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF18_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 8.690e-46
Identity = 87/210 (41.43%), Postives = 129/210 (61.43%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDV 215
            K  + G I  +K R+VA+GF Q+ G+ +    S  PSAASI+ ++A A  K  +L H+D +QA++ A + EEIY+  PE      G V ++ +A+YGL Q+GR W  +  D +   G+EQ + DPCVFRKVVDGE   ++V++VDDI+  A D+   +   A L +K  +KD+G+  +Y GC I  + +    K  Q  Y+ESM+KRFDV
Sbjct:  267 KTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIIV-AADEGEREELFASLNKKFPVKDVGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDV 475          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.660e-45
Identity = 88/210 (41.90%), Postives = 128/210 (60.95%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDV 215
            K  + G I  +K R+VA+GF Q+ G+ +    S  PSAASI+ ++A A  K  +L H+D +QA++ A + EEIY+  PE      G V ++ +A+YGL Q GR W  +  D +   G+EQ + DPCVFRKVVDGE   ++V++VDDIL  A D+   +   A L +K  +KD+G+  +Y GC I  + +    K  Q  Y+ESM+KRFDV
Sbjct:  554 KTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQGGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDV 762          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5JXE8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE8_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 4.740e-45
Identity = 84/210 (40.00%), Postives = 129/210 (61.43%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDV 215
            K  + G I  +K R+VA+GF ++ G+ +    S  PSAASI+ ++A A  K  +L H+D +QA++ A ++EEIY+  PE  +   G V ++ +A+YG  Q+GR W  +  D +   G+EQ + DPCVFRKVVDGE   ++V++VDDIL  A D+   +   A L +K+ +KD+G+  +Y GC    + +    K     Y+ESM+KRFDV
Sbjct:   70 KTNEKGLIVDFKARMVARGFSRIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLEEEIYLRFPEGCRGMSGKVVKVERALYGPKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKVPVKDLGECTWYDGCATAMDVENGIAKLSHTAYIESMLKRFDV 278          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 5.760e-45
Identity = 83/196 (42.35%), Postives = 122/196 (62.24%), Query Frame = 0
Query:   20 LVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDV 215
            +VA+GF Q+ G+ +    S  PSAASI+ ++A A  K  +L H+D +QA++ A + EEIY+  PE      G V ++ +A+YGL Q+GR W  +  D +   G+EQ + DPCVFRKVVDGE   ++V++VDDIL  A D+   +   A L +K  +KD+G+  +Y GC I  + +    K  Q  Y+ESM+KRFDV
Sbjct:    1 MVARGFSQIPGIDFRHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLREEIYLSFPEGCSSMSGKVVKIERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGDREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYIESMLKRFDV 195          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5K1I0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I0_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 7.680e-45
Identity = 87/210 (41.43%), Postives = 128/210 (60.95%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDV 215
            K  + G I  +K R+VA+GF Q+ G+ +    S  PSAASI+ ++A A  K  +L H+D +QA++ A + EEIY+  PE      G V ++ +A+YGL Q+GR W  +  D +   G+EQ + DPCVFRKVVDGE   ++V++VDDIL  A D+   +   A L +K  +KD+G+  +Y GC I  + +    K  Q  Y+E M+KRFDV
Sbjct:  413 KTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVMYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIEGMLKRFDV 621          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 8.850e-45
Identity = 87/211 (41.23%), Postives = 130/211 (61.61%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK 216
            K  ++GKI+K+K R+VA+GF Q+  V Y    SP PS+ASI ++LA A  K   L H+D +QA   A +DEE++  +P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +K   K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK
Sbjct:  900 KTNKEGKIDKFKARVVARGFSQLPNVDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVK 1109          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5JJQ8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJQ8_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.030e-44
Identity = 90/210 (42.86%), Postives = 127/210 (60.48%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDV 215
            K  ++GKIEK K RLVA+GF QV  V      SP PS+AS++++LA A  K   L H+D +QA+  A +DEE+ + +     +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +K   K+MG+ E + GC I R+ +   LK  Q  Y++SM+KRFDV
Sbjct:  452 KTNKEGKIEKLKGRLVARGFSQVPNVDNFHSSSPCPSSASVKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVVLRLSAGCGDKLHKIVQAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNMGECESFDGCAIERDVEAGTLKISQTAYIDSMVKRFDV 660          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5JRB0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB0_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 1.800e-44
Identity = 87/210 (41.43%), Postives = 126/210 (60.00%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDV 215
            K  + G I  +K R+VA+GF Q+ G+ +    S  PSAASI+ ++A A  K  +L H+D +QA++ A + EEIY+  PE      G V ++  A+YGL Q+GR W  +  D +   G+EQ   DPCVFRKVVDGE   ++V++VDDIL  A D+   +   A   +K  +KD+G+  +Y GC I  + +    K  Q  Y+ESM+KRFDV
Sbjct:  162 KTSEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAAATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVEHALYGLKQSGREWGFEAADALIENGYEQCGVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASPNKKFPMKDLGECTWYDGCAIAMHVEYGITKLSQTAYIESMLKRFDV 370          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 168 bits (425), Expect = 2.260e-44
Identity = 82/213 (38.50%), Postives = 131/213 (61.50%), Query Frame = 0
Query:    2 LYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFD 214
            ++ +K  + GK+ +YK RLVAQGF Q+ GV YT+ YSP     ++R  +A +A+KD E+R  D + A+L  +++EEI++E PE F +  G V RL   +YGL QAGR WN K    +T +GF +  ADPCV+    DG+   ++ V VDDI+     ++ ID   + L +  ++KD+G+ +  +G  I RNRK + +   Q  Y+ ++++RF+
Sbjct:  904 VFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFN 1115          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 167 bits (424), Expect = 3.130e-44
Identity = 87/209 (41.63%), Postives = 128/209 (61.24%), Query Frame = 0
Query:    2 LYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMI 210
            ++K K G DG+IEKYK RLVA+GF QVEG+ + E ++P    AS+R LLA AA  D E+   D + AFL  D+DEEIY+++P  F      V +LNKA+YGL QAGR W  K   +  A+GF +  +D  VF K  DG   +++ ++VDD+L  + +   +     +L  + ++ D+G+A + +G  ITR+R  R L+  QH YVE  +
Sbjct:  975 VFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDGIL-LIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCL 1182          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF18_9PHAE8.690e-4641.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JI74_9PHAE1.660e-4541.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JXE8_9PHAE4.740e-4540.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JXU1_9PHAE5.760e-4542.35Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1I0_9PHAE7.680e-4541.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQW4_9PHAE8.850e-4541.23Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJQ8_9PHAE1.030e-4442.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRB0_9PHAE1.800e-4441.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C3AKI0_9AGAM2.260e-4438.50Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A401G4V0_9APHY3.130e-4441.63Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..215
e-value: 6.9E-48
score: 163.4
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 4..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig964contigF-serratus_M_contig964:206630..207277 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig964.20965.1mRNA_F-serratus_M_contig964.20965.1Fucus serratus malemRNAF-serratus_M_contig964 206618..207277 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig964.20965.1 ID=prot_F-serratus_M_contig964.20965.1|Name=mRNA_F-serratus_M_contig964.20965.1|organism=Fucus serratus male|type=polypeptide|length=216bp
MLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLL
ATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAI
YGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVD
DILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKF
DQHLYVESMIKRFDVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2