prot_F-serratus_M_contig964.20965.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig964.20965.1
Unique Nameprot_F-serratus_M_contig964.20965.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length216
Homology
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5JIS9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS9_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 5.750e-51
Identity = 88/210 (41.90%), Postives = 130/210 (61.90%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDV 215
            K  ++GK++K+K  LVA+GF Q+  V +    SP PS+ASI+++LA A  K   L H+D +QA+  A +DEE+++ IP  + +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    MV+V++VDDIL    D+   +   A L +K   K+ G+ E++ GC I R+ +    K  Q  Y++SM+KRFDV
Sbjct:   10 KTNKEGKVDKFKALLVARGFSQIPNVDFFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLRIPAGYGDKSHKIVQAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMVIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNRGEYEWFDGCAIDRDVEPGTFKISQTAYIDSMVKRFDV 218          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.290e-47
Identity = 88/210 (41.90%), Postives = 130/210 (61.90%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDV 215
            K   +GKI K+K RLVA+GF ++  V Y    SP PS+ASI+++LA A  K   L H+D +QA+  A +DEEI++ +P    +    +G+  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDD+L    D+   +   A L +K   K++G+ E++  C I R+ +   LK  Q  Y+++M+KRFDV
Sbjct:  216 KTNNEGKIHKFKARLVARGFSKIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEIFLRLPAGCGDKSHKIGKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLVAESDE-DCEELLASLKKKFPTKNLGECEWFHRCAIERDVEAGTLKISQTTYIDNMVKRFDV 424          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 3.400e-47
Identity = 87/211 (41.23%), Postives = 133/211 (63.03%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK 216
            K  ++GKI+ +K RLVA+GF Q+  V Y    SP PS+ASI+++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +K   K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK
Sbjct:  791 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVK 1000          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 3.500e-47
Identity = 87/211 (41.23%), Postives = 133/211 (63.03%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK 216
            K  ++GKI+ +K RLVA+GF Q+  V Y    SP PS+ASI+++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +K   K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK
Sbjct: 1170 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVK 1379          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 3.520e-47
Identity = 87/211 (41.23%), Postives = 133/211 (63.03%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK 216
            K  ++GKI+ +K RLVA+GF Q+  V Y    SP PS+ASI+++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +K   K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK
Sbjct: 1190 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVK 1399          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 3.540e-47
Identity = 87/211 (41.23%), Postives = 133/211 (63.03%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK 216
            K  ++GKI+ +K RLVA+GF Q+  V Y    SP PS+ASI+++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +K   K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK
Sbjct: 1333 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVK 1542          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 3.920e-47
Identity = 87/210 (41.43%), Postives = 132/210 (62.86%), Query Frame = 0
Query:    6 KIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDV 215
            K  ++GKI+ +K RLVA+GF Q+  V Y    SP PS+ASI+++LA A  K   L H+D +QA+  A +DEE+++++P    +    + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +K   K++ + +++ GC I R+ +T  L+  Q  Y++SM+KRFDV
Sbjct:  345 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDV 553          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 175 bits (444), Expect = 6.390e-47
Identity = 94/212 (44.34%), Postives = 133/212 (62.74%), Query Frame = 0
Query:    2 LYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRF 213
            ++K K G DG+IEKYK RLVA+GF QVE V Y E ++PT   ++IR LLA AA  D E+   D + AFL  D+DEEIY+  P  F++ P  V RL KA+YGL QA R W  K   +  ++GF+++ AD  VF K VDG   ++V ++VDD+L  A   + ID   A L +K  + D+G+A + +   I R+R  R L+  Q  YVE++++RF
Sbjct:  998 VFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIRTLLALAAAHDLEIHQMDVKSAFLNGDLDEEIYMACPPGFEDRPDIVWRLRKALYGLKQASRQWYKKIRAEFESLGFKRSDADHGVFYKEVDGSL-VIVALYVDDMLIFADKVSAIDSVKASLKEKFDMTDLGEAHWVLNMEIIRDRPNRTLELSQRQYVETILERF 1208          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 173 bits (438), Expect = 4.110e-46
Identity = 93/211 (44.08%), Postives = 134/211 (63.51%), Query Frame = 0
Query:    2 LYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVF-RKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIK 211
            +++ K G DGKI+KYK RLVA+GF QVEGV YT+ ++P    ASIRMLLA AA  D E+   D + AFL  D++EEI++E P  FQ+    V RL K++YGL QA R W  K      ++G+ ++ AD  VF ++  DG+   VV V+VDD+L  AKD+A +D    ELG   ++ D+G+A + +G  I  +R  + +   QH YVE+++K
Sbjct: 1013 VFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEIFMEAPPGFQQDKAHVWRLQKSLYGLKQASREWYKKVRALFESLGYSRSNADHSVFYKRGKDGDLT-VVAVYVDDMLIFAKDRAAVDHIKLELGVPYEMSDLGEARWILGMEIIHDRARKTITLSQHQYVENILK 1222          
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 172 bits (437), Expect = 5.610e-46
Identity = 88/211 (41.71%), Postives = 131/211 (62.09%), Query Frame = 0
Query:    2 LYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKR 212
            ++K K G DG IEKYK RLVA+GF QVEG+ YT+ ++P    ASIR +LA AA+ D ++   D + AFL  D+DEEIY+  P  F    G+V RL K++YGL QA R W  K   +   +GFE++ AD  +F KV +G   +++ ++VDD+L    D+ TID F + L ++ ++ D+G A + +G  I R+R    L   Q  Y+E +++R
Sbjct: 1038 VFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFDHDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVENGVI-LIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILER 1247          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig964.20965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIS9_9PHAE5.750e-5141.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLS1_9PHAE1.290e-4741.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE3.400e-4741.23Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE3.500e-4741.23Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE3.520e-4741.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE3.540e-4741.23Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JC10_9PHAE3.920e-4741.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9XTU1_9APHY6.390e-4744.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A060SSE0_PYCCI4.110e-4644.08Integrase catalytic domain-containing protein n=1 ... [more]
A0A1M2VV58_TRAPU5.610e-4641.71Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..215
e-value: 6.9E-48
score: 163.4
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 4..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig964contigF-serratus_M_contig964:206630..207277 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig964.20965.1mRNA_F-serratus_M_contig964.20965.1Fucus serratus malemRNAF-serratus_M_contig964 206618..207277 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig964.20965.1 ID=prot_F-serratus_M_contig964.20965.1|Name=mRNA_F-serratus_M_contig964.20965.1|organism=Fucus serratus male|type=polypeptide|length=216bp
MLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLL
ATAAVKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAI
YGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVD
DILADAKDKATIDRFAAELGQKLKLKDMGDAEYYMGCHITRNRKTRELKF
DQHLYVESMIKRFDVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2