prot_F-serratus_M_contig964.20963.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig964.20963.1
Unique Nameprot_F-serratus_M_contig964.20963.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length541
Homology
BLAST of mRNA_F-serratus_M_contig964.20963.1 vs. uniprot
Match: A0A6P6WRG3_COFAR (acyl-coenzyme A thioesterase 9, mitochondrial-like n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6WRG3_COFAR)

HSP 1 Score: 268 bits (684), Expect = 1.110e-78
Identity = 186/508 (36.61%), Postives = 263/508 (51.77%), Query Frame = 0
Query:   21 RFQVKSASSAGLSHRHRLLPSKLTSRCVTVSLPSMAPFRGTSAE-DA--VSRRDREVQPGVFRSPITNALWEIRKAEIDFQGKRRAPGKKNASETLSAVPPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRMFEDLDALAGNVAAKHCS--EDPSFPLL-VTASVDRIVLKRHPPLDSDITLTGRVVWTGRSSMVINMRRVSRRFLLNGEAVLACVSSPPGACYVDDDPSTEDGKCWLDANFTFVARDRETGRSCPVSPLDLGGTNEGLSQPEPIDGHEERSEDGQNDSTQKGWKAIWRRVQAHKDRQTLERRGAKKASDASLRLDALRLRQEAEVAELVAAGFPLLRLPALADPHAVLMRQTALSSTLICMPQQRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLEACVLYTKQGDDEHATPQACVEVLASVVRPESVESKVSNRFNLTFSFPELLVGSNDQARPLLRTVLPADATEASRIV 522
            +F  K + S+  S    + P +  S        +M+P   TSA  DA    R+   + PG++ SP+TNALWE R +   F+          +   L A PPS SR++I Y FSTD  LRE YRNP   +R+G++ EDLDALAG ++ KHCS  +  + PLL VTASVD+IVL+R   +D+D+T+ G V W GRSS+ I +                             + S++     L ANFTFVARD  TG+S PV+ +      E L                        W+    R Q  K ++  +R+G     +   RL+           EL+A G     +PALAD  ++L+R T L ++LIC PQQRN   RIFGGFLM RA+E+ F  A+ F G+ P F E+D V FL+PVDVG+ +  ++CVLYT+  + +   P   VEV+A V RPE   S+VSN+F  TF+     + +  +    +R V+PA   EA R++
Sbjct:  152 KFTQKRSFSSAPSDPFSVKPMEFGSSDSIPVNSTMSPRFETSAPIDAGHSMRKPISLWPGMYHSPVTNALWEARSSI--FERLNNVAADAPSPNELIAKPPSKSRTSIVYKFSTDYILREQYRNPWNEIRMGKLVEDLDALAGTISFKHCSSADSTTMPLLLVTASVDKIVLRRPIRVDTDLTIVGAVTWVGRSSLEIQLEVTQSA----------------------QETSSQSDSLALTANFTFVARDSRTGKSAPVNQISPETEREKLL-----------------------WEEAEERNQIRKKKRGEKRQGIDNDEETK-RLN-----------ELLAEGRVFCDMPALADRDSILIRDTYLQNSLICQPQQRNIHGRIFGGFLMRRAFELAFATAYSFAGAAPRFVEVDHVDFLKPVDVGNFLRFKSCVLYTELENPDK--PMINVEVVAHVTRPEFRSSEVSNKFYFTFTVRPDAIKNGLK----IRNVVPATEEEAKRVI 594          
BLAST of mRNA_F-serratus_M_contig964.20963.1 vs. uniprot
Match: UPI001CC3B7E3 (acyl-coenzyme A thioesterase 2, chloroplastic-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3B7E3)

HSP 1 Score: 266 bits (679), Expect = 1.140e-78
Identity = 190/513 (37.04%), Postives = 271/513 (52.83%), Query Frame = 0
Query:   23 QVKSASSAGLSHRHRLLPSKLTSRCVTVSLPSMA----PFRGTSAEDAVS--RRDREVQPGVFRSPITNALWEIRKAEIDFQGKRRAPGKKNASETLSAVPPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRMFEDLDALAGNVAAKHCSEDPSFP---LLVTASVDRIVLKRHPPLDSDITLTGRVVWTGRSSMVINMRRVSRRFLLNGEAVLACVSSPPGACYVDDDPSTEDGKCWLDANFTFVARDRETGRSCPVSPLDLGGTNEGLSQPEPIDGHEERSEDGQNDSTQKGWKAIWRRVQA---HKDRQTLERRGAKKASDASLRLDALRLRQEAEVAELVAAGFPLLRLPALADPHAVLMRQTALSSTLICMPQQRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLEACVLYTKQGDDEHATPQACVEVLASVVRPESVESKVSNRFNLTFSF-PELLVGSNDQARPLLRTVLPADATEASRIV 522
            Q ++ SS+ +S     L S  ++   + ++P ++    PF  +++ DA S  R+   + PG++ SP+TNALWE R +   F+     P        L    PS SR+++ Y FSTD  LRE YR+P   VRIG++ EDLDALAG ++ KHCS D +     LLVTASVD++VLK+   +D D+ + G V+W GRSS+ I +           E   +   S         DPS       L ANFTFVARD +TG+S PV+ +      E +                           +W    A   H+ R+   +RG +         D  RL        L+A G     +PALA+  ++L+R T L ++LIC PQQRN   RIFGGFLM+RA+E+ F  A+ F G+ P F E+D V FL+PVDVG+ + L++CVLYT+ G+ +  +P   +EV+A V RPE   S+VSN F  TFS  PE +    D  +  +R V+PA   EA RI+
Sbjct:   71 QSRAFSSSSISPSKEPLESMDSNSSPSRTIPVVSTFANPFDTSTSIDASSSIRKPISLWPGMYHSPVTNALWEARSSI--FERLIDPPLDAPTQSELLTKTPSQSRTSVLYNFSTDYILREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSNDDNMTRPVLLVTASVDKMVLKKPICVDKDLKIVGAVIWVGRSSIEIQL-----------EVTQSTEES--------SDPSDAVA---LTANFTFVARDYKTGKSSPVNQISPETDKERM---------------------------LWEEADARNKHRKRKRENKRGVENG-------DVNRLES------LLAEGRVFCDMPALANRDSILIRDTCLENSLICQPQQRNIHGRIFGGFLMNRAFELAFSTAYAFAGAAPCFLEVDHVDFLRPVDVGNFLRLKSCVLYTELGNPQ--SPLINIEVVAHVTRPELRSSEVSNTFYFTFSIRPEAM---KDGLK--IRNVVPATEEEALRIL 512          
BLAST of mRNA_F-serratus_M_contig964.20963.1 vs. uniprot
Match: UPI0005403031 (acyl-coenzyme A thioesterase 9, mitochondrial n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0005403031)

HSP 1 Score: 264 bits (675), Expect = 1.290e-78
Identity = 170/451 (37.69%), Postives = 242/451 (53.66%), Query Frame = 0
Query:   76 PGVFRSPITNALWEIRKAEIDFQGKRRAPGKKNASETLSAVPPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRMFEDLDALAGNVAAKHCSEDPSFP---LLVTASVDRIVLKRHPPLDSDITLTGRVVWTGRSSMVINMRRVSRRFLLNGEAVLACVSSPPGACYVDDDPSTEDGKCWLDANFTFVARDRETGRSCPVSPLDLGGTNEGLSQPEPIDGHEERSEDGQNDSTQKGWKAIWRRVQAHKDRQTLERRGAKKASDASLRLDALRLRQEAEVAELVAAGFPLLRLPALADPHAVLMRQTALSSTLICMPQQRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLEACVLYTKQGDDEHATPQACVEVLASVVRPESVESKVSNRFNLTFSF-PELLVGSNDQARPLLRTVLPADATEASRIV 522
            PGV+ SP+TNALWE R    + +G+      K + + L +  PS SR+++ Y FS+D  LRE YRNP   +R+G++ EDLDALAG ++ KHCS+        LLVTASVD+I+LK+   +D+D+TL G V W GRSSM + +                 V  P        D S +     L ANFTFVARD ETG+S P++ +      E                           K +W + +A    + ++R   K   D     D +R+       EL+A G   + LPALAD  ++L+R T L S++IC PQQRN   RIFGGFLM +A+E+ F  A+ F G+ P F E+D V F++PVDVG+ + +++ VLYT+  + +   P   VEV+A V RPE   S++SN+F  TF+  PE            +R+V PA   EA R++
Sbjct:   92 PGVYHSPVTNALWEARSKFFE-KGEIEVENDKISQDGLVSKTPSQSRTSVEYKFSSDFVLREQYRNPWNRIRMGKLVEDLDALAGTISYKHCSKSIGITRPILLVTASVDKILLKKPIQVDADLTLVGAVTWVGRSSMEMQLE----------------VLQP------SQDASQKSDPLALVANFTFVARDAETGQSAPINRISPETEQE---------------------------KLLWEQAEARNKMRKVKRGEQKNKIDNQ---DIIRIN------ELLAEGRVFVDLPALADRDSILIRDTCLQSSIICQPQQRNIHGRIFGGFLMRKAFELAFSTAYTFAGASPRFVEVDHVDFVKPVDVGNFLRMKSSVLYTEVQNPDR--PLINVEVVAHVTRPELRTSEISNKFYFTFTVCPEATKNGLK-----IRSVYPASEEEARRVI 476          
BLAST of mRNA_F-serratus_M_contig964.20963.1 vs. uniprot
Match: A0A0E0M3G4_ORYPU (Uncharacterized protein n=12 Tax=Oryzeae TaxID=147380 RepID=A0A0E0M3G4_ORYPU)

HSP 1 Score: 265 bits (677), Expect = 1.370e-78
Identity = 182/467 (38.97%), Postives = 252/467 (53.96%), Query Frame = 0
Query:   68 SRRDREVQPGVFRSPITNALWEIRKAEIDFQ---GKRRAPGKKNASET-----LSAVPPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRMFEDLDALAGNVAAKHCSEDPSFP---LLVTASVDRIVLKRHPPLDSDITLTGRVVWTGRSSMVINMRRVSRRFLLNGEAVLACVSSPPGACYVDDDPSTEDGKCWLDANFTFVARDRETGRSCPVSPLDLGGTNEGLSQPEPIDGHEERSEDGQNDSTQKGWKAIWRRVQAHKDRQTLERRGAKKASDASLRLDALRLRQEAEVAELVAAGFPLLRLPALADPHAVLMRQTALSSTLICMPQQRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLEACVLYTKQGDDEHATPQACVEVLASVVRPESVESKVSNRFNLTFSFPELLVGSNDQARPL-LRTVLPADATEASRIV 522
            +R+   + PG++ SP+TNALWE R +  +     G + A GK+   +      L    P+ SR++I Y F+TD  LRE YR+P   VRIG++ EDLDALAG +A KHCS++ S     LLVTASVD++ LK+   +D+D+ + G V + GRSS+ I +                          VD D   +     L ANFTFVARD  TG+S PV+ L           PE     +  +E    D  +K              R+  E++G  +     L ++A RL        L+A G     LPALAD  ++L++ T L ++LIC PQQRN   RIFGGFLMHRA+E+ F  A+ F G RP F E+D V FL+PVDVGD +  ++CVLYT+ G+ E   P   VEV+A V RPE  +S+VSN F+ TF+     V S+     L +R V+P+   EA RI+
Sbjct:   98 ARKPLSLWPGMYHSPVTNALWEARSSIFERMIDAGAKTAGGKEQEQQQPPQTELLTKTPAQSRTSIVYKFATDDILREQYRDPWNEVRIGKLLEDLDALAGTIAVKHCSDEDSTTRPLLLVTASVDKMELKKPIRVDTDLKIAGAVTYVGRSSIDIQIE----------------------VTQVDQDSDMQSDPIALTANFTFVARDSMTGKSAPVNRL----------SPETEKEKQLFAEREARDKLRK--------------RKREEQKGVLENGINKLHVEAERLNS------LLAEGRVFSDLPALADRDSILLKDTRLENSLICQPQQRNLHGRIFGGFLMHRAFELAFSTAYAFVGQRPCFLEVDHVDFLKPVDVGDFLRFKSCVLYTQLGNVEQ--PLVNVEVVAHVTRPELRKSEVSNTFHFTFT-----VCSDALKNGLKIRHVVPSTEEEARRIL 505          
BLAST of mRNA_F-serratus_M_contig964.20963.1 vs. uniprot
Match: A0A6P8DCJ8_PUNGR (acyl-coenzyme A thioesterase 9, mitochondrial n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8DCJ8_PUNGR)

HSP 1 Score: 263 bits (672), Expect = 1.540e-78
Identity = 173/457 (37.86%), Postives = 235/457 (51.42%), Query Frame = 0
Query:   69 RRDREVQPGVFRSPITNALWEIRKAEIDFQGKRRAPGKKNASETLSAVPPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRMFEDLDALAGNVAAKHCSEDPSFP---LLVTASVDRIVLKRHPPLDSDITLTGRVVWTGRSSMVINMRRVSRRFLLNGEAVLACVSSPPGACYVDDDPSTEDGKCWLDANFTFVARDRETGRSCPVSPLDLGGTNEGLSQPEPIDGHEERSEDGQNDSTQKGWKAIWRRVQAHKDRQTLERRGAKKASDASLRLDALRLRQEAEVAELVAAGFPLLRLPALADPHAVLMRQTALSSTLICMPQQRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLEACVLYTKQGDDEHATPQACVEVLASVVRPESVESKVSNRFNLTFSFPELLVGSNDQARPLLRTVLPADATEASRIV 522
            R+   + PG++ SP+TNALWE R    +  G   +PG  +    L    PS SR+++ Y FS D  LRE YRNP   +R GR+ EDLDALAG +  KHC  D       LLVTASVDR+VLK+   LD+D+ + G V W GRSSM I +  +                         ++         L ANFTFVARD ETG+S P++ +      E L                        W+    R +  K  + L+R G +K  +   RL AL           ++ G     +PALAD  ++LM+ T   ++LIC PQQRN   RIFGGFLM RA+E+ F   + F G+ P F E+D V FL+PVDVG+ + L++CVLYT+   D  A P   VEV+A V RPE   S+VSN+F  TF+     +G+       +R V+PA   EA R++
Sbjct:   55 RKPVSLWPGMYHSPVTNALWEARSRIFERPGD--SPG--DGEGELVPRTPSRSRTSVLYKFSEDYILREQYRNPWDEIRTGRLVEDLDALAGTICFKHCYNDDGTTRPLLLVTASVDRMVLKKPIFLDTDLEIVGAVTWVGRSSMEIQLEVIQ----------------------ATEETDNHSDSLALTANFTFVARDPETGKSAPINQISAETEREKLL-----------------------WEEAEERNKLRKKMKELKR-GIEKTEEDLSRLQAL-----------LSEGRVFCDMPALADRDSILMKNTCFENSLICQPQQRNMYGRIFGGFLMRRAFELAFSTTYAFAGAAPRFVEVDHVDFLKPVDVGNFLRLKSCVLYTEL--DNPAEPLINVEVVAHVTRPEQRSSEVSNKFYFTFTVSPEALGNG----LTIRKVVPATEEEARRVL 444          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig964.20963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P6WRG3_COFAR1.110e-7836.61acyl-coenzyme A thioesterase 9, mitochondrial-like... [more]
UPI001CC3B7E31.140e-7837.04acyl-coenzyme A thioesterase 2, chloroplastic-like... [more]
UPI00054030311.290e-7837.69acyl-coenzyme A thioesterase 9, mitochondrial n=1 ... [more]
A0A0E0M3G4_ORYPU1.370e-7838.97Uncharacterized protein n=12 Tax=Oryzeae TaxID=147... [more]
A0A6P8DCJ8_PUNGR1.540e-7837.86acyl-coenzyme A thioesterase 9, mitochondrial n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.129.10coord: 134..303
e-value: 4.6E-32
score: 113.0
NoneNo IPR availableGENE3D3.10.129.10coord: 369..540
e-value: 3.7E-31
score: 110.1
NoneNo IPR availablePANTHERPTHR12655ACYL-COA THIOESTERASEcoord: 67..533
IPR033120Hotdog acyl-CoA thioesterase (ACOT)-type domainPROSITEPS51770HOTDOG_ACOTcoord: 125..266
score: 19.906
IPR033120Hotdog acyl-CoA thioesterase (ACOT)-type domainPROSITEPS51770HOTDOG_ACOTcoord: 377..496
score: 26.309
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 376..492
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 135..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig964contigF-serratus_M_contig964:105559..131220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig964.20963.1mRNA_F-serratus_M_contig964.20963.1Fucus serratus malemRNAF-serratus_M_contig964 105521..131696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig964.20963.1 ID=prot_F-serratus_M_contig964.20963.1|Name=mRNA_F-serratus_M_contig964.20963.1|organism=Fucus serratus male|type=polypeptide|length=541bp
MDRVSHTAGRLWVRSGYCAARFQVKSASSAGLSHRHRLLPSKLTSRCVTV
SLPSMAPFRGTSAEDAVSRRDREVQPGVFRSPITNALWEIRKAEIDFQGK
RRAPGKKNASETLSAVPPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGR
MFEDLDALAGNVAAKHCSEDPSFPLLVTASVDRIVLKRHPPLDSDITLTG
RVVWTGRSSMVINMRRVSRRFLLNGEAVLACVSSPPGACYVDDDPSTEDG
KCWLDANFTFVARDRETGRSCPVSPLDLGGTNEGLSQPEPIDGHEERSED
GQNDSTQKGWKAIWRRVQAHKDRQTLERRGAKKASDASLRLDALRLRQEA
EVAELVAAGFPLLRLPALADPHAVLMRQTALSSTLICMPQQRNTANRIFG
GFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLEACVL
YTKQGDDEHATPQACVEVLASVVRPESVESKVSNRFNLTFSFPELLVGSN
DQARPLLRTVLPADATEASRIVMAKHRHHLQQVAHEETRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033120HOTDOG_ACOT
IPR029069HotDog_dom_sf