prot_F-serratus_M_contig962.20961.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig962.20961.1
Unique Nameprot_F-serratus_M_contig962.20961.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length834
Homology
BLAST of mRNA_F-serratus_M_contig962.20961.1 vs. uniprot
Match: D8LDL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL3_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 1.030e-137
Identity = 425/845 (50.30%), Postives = 521/845 (61.66%), Query Frame = 0
Query:    1 MPKRTRPVRRRVPGEGKKKKPKVHGAPMSRINRDRQLEEEAKQKLLAMAAIPPEQKARIHKMTEDFLNTPLGQQEIGANAYLRQKDPDVMMLNLGMTLSGDARSNASLSISSGILF------SPPALDNNGALLTIGHGKIEEVNHGQPTEMVEGTQLAEPLEQALE------------------------------LSSSQGT---------EDFNLLIRTLAAHGRGAEARNRVVPEMKRRGIALGSRTYSALLVGAAIERNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVTMETLIRAAATAPQWIRAYGTIVDDLVERFIGLGLVPEEDTYRALLLGYGSGGDADKVLQCIEEAHILRGHFSDHVGDGTPKLSWETYCVALEAIAKCCSVDRHRGTRPRWGIMPGQDRLIMDIGPLQVPEEDADRIKEMQMAGMEWDEDGEAVLRKGFRKGTRKRFMGVHKPKELLGDDEFERSIEEEYERVMNKAKRLKHKAEQEKLMLLGLHEDDDEMDAKTRPRVLPDPRDREITQAPLPPWEPGPMELSGAHSPMDLLRGMQAGVAGLNAQPAAIGVGDGFSKNDWKAEEDLRSGEVEANAREIEVGEVSRDWEEEGDIRDAARTMWAQEKTEPDSNSDDERWASLEQDKEEASSGYGVGSGRIGTLTHGEEGEDEGGVLRSPTMLDILEGNLPRGREGRDEERPSEERMEGDDGSSDEVELPPNIDDIMAEMRSLVQQDLDGRRQRHKH 800
            MPKR+ PVRR++PG GKKKKPKVHGAPMSRI+RD++LE + K ++ AM AI PE +A++ +MTE F+NTPLG Q+   NA+LR+KDPD MMLNLGM LS D  + A      G L       SP  L ++G +              + T      Q + P  +                                 + S +G          E+F+ L+RTL AHGR  EAR+RV+PEM+RRG+     T+++LL G AIER+         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  IRAYGTIVDDLV+RFIGLG+ PE DTYRALLL Y +GGDADKVLQCIEE H+L GH +D++GDGTP+L W+ YC +L+AIA+C SV RHRGT  RWGI+PGQD L+MDI  L+VPEED  R++EMQMA MEWDE+GEA L+KGFRKG R +F GV  P +L+GDDE+ER+I  +YE+VM+KAK +K    +E L+ LG+  D+ + +AKTRPRVLPDPRDRE  +AP+P W      LS   S                       V +G+    W+ EED  SG  E+  RE +  E                                               G G  +GR+ +   G  GE+EG V +  +MLD+LEG+   G     E + +    E +DG    + LP N++ +M E+R+L QQDLD R+ RH H
Sbjct:   44 MPKRSGPVRRKIPGAGKKKKPKVHGAPMSRIHRDQRLEADGKAQMEAMKAISPEDRAKVQEMTEAFINTPLGAQDDSINAFLRRKDPDAMMLNLGMRLSDDDHAIAGGGSGEGNLPLSADCPSPSPLLHDGVVDATAXXXXXXXXXXRDTLPFPSXQPSSPWSREPSGMYSNSPAPPTPPYPYSLPSSMMPYGGEAGMGSPRGXXXXXXXXXXEEFSFLVRTLGAHGRFEEARSRVIPEMRRRGVTPTEHTFASLLAGTAIERDPIAAEQVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRAYGTIVDDLVQRFIGLGVTPEVDTYRALLLAYSNGGDADKVLQCIEEVHVLEGHTADNLGDGTPRLPWQAYCDSLDAIARCTSVGRHRGTPARWGILPGQDSLVMDITSLEVPEEDFSRVREMQMAAMEWDEEGEAALKKGFRKGKRTKFRGVTTPDDLVGDDEYERAIASQYEQVMDKAKAMKEVERREALLQLGIDPDEGDKEAKTRPRVLPDPRDRERIEAPVPHW------LSDGGS-----------------------VREGWGG--WEEEEDDVSGR-ESRRREHQSPE-----------------------------------------------GTGDPAGRVSSRLSGRSGEEEG-VFKKASMLDLLEGDQADGGVSGGEAKETG-WSEDEDGR---LVLPDNLEGMMEEVRALAQQDLDRRKNRHPH 804          
BLAST of mRNA_F-serratus_M_contig962.20961.1 vs. uniprot
Match: A0A6H5L4T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T9_9PHAE)

HSP 1 Score: 428 bits (1100), Expect = 1.420e-129
Identity = 418/847 (49.35%), Postives = 506/847 (59.74%), Query Frame = 0
Query:    1 MPKRTRPVRRRVPGEGKKKKPKVHGAPMSRINRDRQLEEEAKQKLLAMAAIPPEQKARIHKMTEDFLNTPLGQQEIGANAYLRQKDPDVMMLNLGMTLSGDARSNASLSISSGILFSPPALDNNGALLTIGHGKIEEVNHG-------------------------QPTEMVEGTQLAEPLEQALELSSSQ---------------------GTEDFNLLIRTLAAHGRGAEARNRVVPEMKRRGIALGSRTYSALLVGAAIERNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVTMETLIRAAATAPQWIRAYGTIVDDLVERFIGLGLVPEEDTYRALLLGYGSGGDADKVLQCIEEAHILRGHFSDHVGDGTPKLSWETYCVALEAIAKCCSVDRHRGTRPRWGIMPGQDRLIMDIGPLQVPEEDADRIKEMQMAGMEWDEDGEAVLRKGFRKGTRKRFMGVHKPKELLGDDEFERSIEEEYERVMNKAKRLKHKAEQEKLMLLGLHEDDDEMDAKTRPRVLPDPRDREITQAPLPPWEPGPMELSG-AHSPMDLLRGMQAGVAGLNAQPAAIGVGDGFSKNDWKAEEDLRSGEVEANAREIEVGEVSRDWEEEGDIRDAARTMWAQEKTEPDSNSDDERWASLEQDKEEASSGYGVGSGRIGTLTHGEEGEDEGGVLRSPTMLDILEGNLPRGREGRDEERPSEERMEGDDGSSDEVELPPNIDDIMAEMRSLVQQDLDGRRQRHKH 800
            MPKR+ PVRR+ PG GKKKKPKVHGAPMSRI+RD++LE + K ++ AM AI PE +A++ +MTE F+NTPLG Q+   NA+LRQKDPD MMLNLGM LS D   +A     SG +  P + D       +  G+++                              QP+ M   +  A        L SS                        E+F+ L+RTL AHGR  EAR+RVVPEM+RRG+     T+++LL GAAIER+         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  IRAYGTIVDDLV+RFIGLG+ PE DTYRALLL Y +GGDADKVLQCIEE H+L GH +D++G+GT KL W+ YC +L+AIA+C SV RHRG   RWGI+PGQD L+MDI  L+VPEED  R++ MQMA MEWDE+GE  L+KGFRKG R +F GV  P +L+GDDE+ER+I  +YE VMNKAK +K    +E L+  G+  D+ + +AKTRPRVLPD RDRE  +AP+P W      LSG A  P+  L   Q                                                         +  +R   + E                         G G  SGR+ +   G  G++EG V +  +MLD+L+G+   G  G     P E     D+     + LP N++ +M E+R+L QQDLD RR RH H
Sbjct:   85 MPKRSGPVRRKFPGAGKKKKPKVHGAPMSRIHRDQRLEADGKAQMEAMKAISPEDRAKLQEMTEAFINTPLGAQDDSINAFLRQKDPDAMMLNLGMRLSDD--DHAIAGGGSGEVNLPLSADGRSPSPLLHDGEVDATAXXXXXXXXXXXXXXXXXXXXPSSPWSRQPSGMYSHSPAAPTTPYPYSLPSSMMPYGGEAGMGSPRGSGGRGGGAAEEFSFLVRTLGAHGRFEEARSRVVPEMRRRGVTPTEHTFASLLAGAAIERDPIAAEQVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRAYGTIVDDLVQRFIGLGVTPEVDTYRALLLAYSNGGDADKVLQCIEELHVLEGHTADNLGNGTAKLPWQAYCDSLDAIARCTSVGRHRGIPARWGILPGQDSLVMDITSLEVPEEDFSRVRGMQMAAMEWDEEGETALKKGFRKGKRTKFRGVTTPDDLVGDDEYERAIASQYEEVMNKAKAMKEVERREALLQRGIDPDEGDKEAKTRPRVLPDLRDRERIEAPVPHW------LSGEASDPLPGLAEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGGKSRSREYQSPE-------------------------GTGDSSGRVSSKLSGRSGKEEG-VFKKASMLDLLQGDQADG--GFSGGEPKETGWSEDEDGR--LVLPDNLEGMMEEVRALAQQDLDRRRNRHPH 893          
BLAST of mRNA_F-serratus_M_contig962.20961.1 vs. uniprot
Match: A0A836C6I1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6I1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.660e-7
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0
Query:  343 SRVTMETLIRAAATAPQWIRAYGTIVDDLVERFIGLGLVPEEDTYRALLLGYGSGGDADKVLQCIEE 409
            ++ T   L+RAAAT+P W++AYG +VD L  R  G G+ P ++T+++LL  YG+ GDAD V   + E
Sbjct:  428 AQATFNALLRAAATSPLWMKAYGNMVDRLRGRMRGYGIPPSQETFQSLLACYGNHGDADGVQSVLAE 494          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig962.20961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDL3_ECTSI1.030e-13750.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4T9_9PHAE1.420e-12949.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C6I1_9STRA2.660e-744.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 528..555
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 247..410
coord: 166..269
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 241..269
e-value: 0.0053
score: 16.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 276..309
e-value: 1.1E-6
score: 26.4
coord: 206..237
e-value: 6.2E-4
score: 17.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 190..238
e-value: 2.2E-6
score: 27.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 273..319
e-value: 5.3E-9
score: 36.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 203..237
score: 9.251
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 308..342
score: 8.769
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 238..272
score: 8.396
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 273..307
score: 9.887
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 383..413
score: 5.722
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 167..202
score: 7.344
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 152..299
e-value: 3.1E-21
score: 78.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 300..371
e-value: 1.5E-6
score: 29.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig962contigF-serratus_M_contig962:259094..270606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig962.20961.1mRNA_F-serratus_M_contig962.20961.1Fucus serratus malemRNAF-serratus_M_contig962 259003..278673 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig962.20961.1 ID=prot_F-serratus_M_contig962.20961.1|Name=mRNA_F-serratus_M_contig962.20961.1|organism=Fucus serratus male|type=polypeptide|length=834bp
MPKRTRPVRRRVPGEGKKKKPKVHGAPMSRINRDRQLEEEAKQKLLAMAA
IPPEQKARIHKMTEDFLNTPLGQQEIGANAYLRQKDPDVMMLNLGMTLSG
DARSNASLSISSGILFSPPALDNNGALLTIGHGKIEEVNHGQPTEMVEGT
QLAEPLEQALELSSSQGTEDFNLLIRTLAAHGRGAEARNRVVPEMKRRGI
ALGSRTYSALLVGAAIERNSSAAEEVWAQMMEDGLKPEARAWSSRVNAHA
RAGDMKTALEVGKQMREAGHPWCVATYTSLIAGFTRGRNYQGAWQTWREM
IMWDVKPDVMAYTAMMKLCTDTNRYEMAMTFLSDMDMEDQRPSRVTMETL
IRAAATAPQWIRAYGTIVDDLVERFIGLGLVPEEDTYRALLLGYGSGGDA
DKVLQCIEEAHILRGHFSDHVGDGTPKLSWETYCVALEAIAKCCSVDRHR
GTRPRWGIMPGQDRLIMDIGPLQVPEEDADRIKEMQMAGMEWDEDGEAVL
RKGFRKGTRKRFMGVHKPKELLGDDEFERSIEEEYERVMNKAKRLKHKAE
QEKLMLLGLHEDDDEMDAKTRPRVLPDPRDREITQAPLPPWEPGPMELSG
AHSPMDLLRGMQAGVAGLNAQPAAIGVGDGFSKNDWKAEEDLRSGEVEAN
AREIEVGEVSRDWEEEGDIRDAARTMWAQEKTEPDSNSDDERWASLEQDK
EEASSGYGVGSGRIGTLTHGEEGEDEGGVLRSPTMLDILEGNLPRGREGR
DEERPSEERMEGDDGSSDEVELPPNIDDIMAEMRSLVQQDLDGRRQRHKH
KHLSDAGEEEGRIEKSNHKRRTDGLRMIAMKNC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf