prot_F-serratus_M_contig962.20959.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig962.20959.1
Unique Nameprot_F-serratus_M_contig962.20959.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length572
Homology
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BLAST of mRNA_F-serratus_M_contig962.20959.1 vs. uniprot
Match: D8LDJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ6_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 5.710e-21
Identity = 63/153 (41.18%), Postives = 83/153 (54.25%), Query Frame = 0 
Query:  215 VTENVSVGAGRLP-WALWVCAMLLCVVLVSYEYIQGNLARWVPFVRGGPREGWAVDFDDVIAAARSRAGSLGSGKQNS-TAEVNGDLGIPDLVSEDNPLPLPDARRENVAPGRPAAQAYGSEDLMWDTRPKPFDHLVFDPVLGVVPWGVLDAW 365
            V E   VG    P W  + C +LL   LV   +++G++  W+PF  G  R+ WA+D D  IA ARSRAGS  SG+ +  + +   D  +PDL+S+       +    N   G       G   LMWD RPKP D+LVF PVLGVVP GV+ AW
Sbjct:  423 VLETAIVGGKAWPSWRAFACILLLS-ALVLGTFLRGSIPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPDLISDSE-----EGEDGNGDQGVVPGDDDGETPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAW 569
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BLAST of mRNA_F-serratus_M_contig962.20959.1 vs. uniprot
Match: A0A6H5LRF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRF5_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 8.980e-20
Identity = 85/269 (31.60%), Postives = 119/269 (44.24%), Query Frame = 0 
Query:  203 GDAAMNLAGKLVVTENVSVGAGRLP-WALWVCAMLLCVVLVSYEYIQGNLARWVPFVRGGPREGWAVDFDDVIAAARSRAGSLGSGKQNS-TAEVNGDLGIPDLVSEDNPLPLPDARRENVAPGRPAAQAYGSEDLMWDTRPKPFDHLVFDPVLGVVPWGVLDAW-----------------ARARREGAGPIGEGDAFTNRCSSVSSSVTEDDVDDGSASPRGACCGKPPSWGRRGHQKRALPPVRYTPEWHAWKAARASSKRTESAD 452
            G  + N  G+    E   VG    P W  + C +LL  + +S  +++G++  W+PF  GG R+ WA D D  IA ARSRAGS  SG+ +  + +   D  +P L+S+       +    N   G       G   LMWD RPKP D+L+F PVLGVVP GV+ AW                 ARA     G  G+G   +++ SS   +     +   + +  G   GK             LPP     EW  W AAR ++     AD
Sbjct:  408 GRRSENRGGEGGGLETGIVGGKSWPSWRTFACILLLSALGLS-TFLRGSMPHWLPFFGGGRRQRWAKDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPGLISDSE-----EGEDGNDTQGVVPGDDDGEAPLMWDRRPKPDDYLIFHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAGARAGGTNGGTXGKGCGCSSKSSSPRGARAPAAMSSKATAVGGVVKGK------------QLPPD----EWPEWLAARRATAAAAVAD 654
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig962.20959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDJ6_ECTSI5.710e-2141.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LRF5_9PHAE8.980e-2031.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 248..571
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 228..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig962contigF-serratus_M_contig962:246432..248429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig962.20959.1mRNA_F-serratus_M_contig962.20959.1Fucus serratus malemRNAF-serratus_M_contig962 246273..249437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig962.20959.1 ID=prot_F-serratus_M_contig962.20959.1|Name=mRNA_F-serratus_M_contig962.20959.1|organism=Fucus serratus male|type=polypeptide|length=572bp
MPGEQKGQGAVAEESKRIARSTEPFATRDVLGEIACKGQVQVLGSCAEGE
QTTMNGDGKRPSQESHGKQEVLPGAVDAVEATALDIPEAPAWRDLDVCVA
PRIWNSHAGKDVGGGSNAGGPNAVPGPPNEGSGAVIEMDSGRKSLKKSAH
YCTDSLSCPEYASDLFNVPAAVPEQEAPERRGPRVKGVGTNIAAIETDRI
DGGDAAMNLAGKLVVTENVSVGAGRLPWALWVCAMLLCVVLVSYEYIQGN
LARWVPFVRGGPREGWAVDFDDVIAAARSRAGSLGSGKQNSTAEVNGDLG
IPDLVSEDNPLPLPDARRENVAPGRPAAQAYGSEDLMWDTRPKPFDHLVF
DPVLGVVPWGVLDAWARARREGAGPIGEGDAFTNRCSSVSSSVTEDDVDD
GSASPRGACCGKPPSWGRRGHQKRALPPVRYTPEWHAWKAARASSKRTES
ADRVGSGGKMGPEGSRSRSVNGGEAGAAVAAGAVAFGKNGSPVEAKIRMP
KAVDSELEDVVAGAKGGIEYGDVSADACGGNPLEIASKVCDGTTSSEFYL
ARLSSASREVSPIRPPVQPCV*
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