prot_F-serratus_M_contig961.20948.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig961.20948.1
Unique Nameprot_F-serratus_M_contig961.20948.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length601
Homology
BLAST of mRNA_F-serratus_M_contig961.20948.1 vs. uniprot
Match: UPI00145904CE (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145904CE)

HSP 1 Score: 236 bits (601), Expect = 6.430e-69
Identity = 124/249 (49.80%), Postives = 164/249 (65.86%), Query Frame = 0
Query:   36 IRLGDTVIFFEGREAIGCDRMKQKTIWQCRHGAFHHDDIVGKPFGCRVFSRTTKGHVYALSPTPELWCQVVPSRTQIVQDFDQSIVIFRLDLKPGDVVVESGTGSGVMSTAIMRTIAPTGFLHTFEFNEIRAKMAQEEFQQNNIGELGKVLHRDVCAGKNEGGGFGQELEGKADAVFLDLPEPWLAVPHAKLVLK-SGKKIASYSPCIEQVMKTCEALRSEGFHSVTTLECRLRPINYAEVQLDTPDFG 283
            I  GDT+I + G E +    MK+   +Q ++GA  H D++GK +G +V  +  KG++Y L PTPELW Q +P RTQI+   D S+V  +LDLKPG VVVESGTGSG +S +I+R+IAPTG LHTFEF++ RA+ A+EEF ++ + E   V HRDVC       GFG  LE  ADAVFLDLP PW A+  AK  +K +G ++ S+SPCIEQV K+ + LR  GF  VTT+EC LR  +   + L   D G
Sbjct:   10 IEEGDTIILYLGYENMHAVTMKRGQTFQTKYGAMRHADVIGKDYGSKV--QCPKGYLYVLQPTPELWTQNLPHRTQILYSTDISVVTMQLDLKPGSVVVESGTGSGSLSHSIIRSIAPTGHLHTFEFHQQRAEKAEEEFVEHGLKEYVTVTHRDVCQD-----GFG--LENVADAVFLDLPRPWEAMASAKTAIKVTGGRLCSFSPCIEQVQKSSDFLRDLGFEEVTTMECLLRNFDVRTINLPLADLG 249          
BLAST of mRNA_F-serratus_M_contig961.20948.1 vs. uniprot
Match: A0A1E7FDD0_9STRA (tRNA (adenine(58)-N(1))-methyltransferase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDD0_9STRA)

HSP 1 Score: 232 bits (592), Expect = 6.650e-69
Identity = 113/241 (46.89%), Postives = 161/241 (66.80%), Query Frame = 0
Query:   36 IRLGDTVIFFEGREAIGCDRMKQKTIWQCRHGAFHHDDIVGKPFGCRVFSRTTKG--HVYALSPTPELWCQVVPSRTQIVQDFDQSIVIFRLDLKPGDVVVESGTGSGVMSTAIMRTIAPTGFLHTFEFNEIRAKMAQEEFQQNNIGELGKVLHRDVCAGKNEGGGFGQELEGKADAVFLDLPEPWLAVPHAKLVLKSGKKIASYSPCIEQVMKTCEALRSEGFHSVTTLECRLRPINYAE 274
            I +G+ V+ FE  ++      ++  I+  R+G FHHDD +GKP+GC++ SR  +G   VY L PTPELW Q +  RTQI+   D S+++F L+++P  V+ ESGTGSG +S  IMR+IAP G LHT+EFN+ RA+ A+ EF  N +  + +V H+DVC GK+  GGF +  +   DA+ LDLPEPW AVP+A   +K   +I SYSPC+EQ  KT  A+++ GFHS+ T+E RL+  NY +
Sbjct:    1 ISVGNLVVIFENFDSSNFCYAEKGKIFNNRNGHFHHDDFIGKPYGCKIRSRNNRGWGFVYLLKPTPELWSQSLNHRTQIIHFLDASMIVFYLNIRPNMVICESGTGSGALSHCIMRSIAPKGMLHTYEFNQQRAETAKLEFANNGVSHISEVHHKDVC-GKHGPGGFDRP-QSSVDAIVLDLPEPWSAVPYAAHCIKPNSRIVSYSPCVEQAQKTIIAMKTSGFHSIKTMEFRLKE-NYVD 238          
BLAST of mRNA_F-serratus_M_contig961.20948.1 vs. uniprot
Match: A0A3R7K8S7_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K8S7_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.230e-68
Identity = 122/254 (48.03%), Postives = 161/254 (63.39%), Query Frame = 0
Query:   32 SAPAIRLGDTVIFFEGREAIGCDRMKQKTIWQCRHGAFHHDDIVGKPFGCRVFSR--TTKGHVYALSPTPELWCQVVPSRTQIVQDFDQSIVIFRLDLKPGDVVVESGTGSGVMSTAIMRTIAPTGFLHTFEFNEIRAKMAQEEFQQNNIGELGKVLHRDVCAGKNEGGGFGQELEGKADAVFLDLPEPWLAVPHAKLVLKSGKKIASYSPCIEQVMKTCEALRSEGFHSVTTLECRLRPINYAEVQLDTPDFG 283
            S+  I  G  VI FE   ++     ++  I+Q RHGAF+H+D++G+PFG ++ SR    +G++  L+PTPELW + +  RTQIV   D S ++F   L+ G  VVESGTGSG ++T+  RT+AP G + TFEFN  RA++A+EEF +N +  +  V  RD C       GF QELEG  D VFLDLP PW A+ HA  +LK G   ASYSPCIEQV KTC+ALRS  F  + T+E RL P N   + L  PDFG
Sbjct:   23 SSRIITEGSLVILFETHNSVTYCYAQKDAIYQNRHGAFYHNDMIGQPFGSKIISRKKNARGYLILLAPTPELWSRALRHRTQIVFTLDASAIMFAAALRSGSRVVESGTGSGALTTSFARTVAPHGHVFTFEFNAHRAEIAREEFTRNGLESVITVECRDACEQ-----GFPQELEGTIDMVFLDLPSPWNAIGHATKMLKQGGFFASYSPCIEQVQKTCDALRSANFELIRTIETRLVPYNSRLIDLPVPDFG 271          
BLAST of mRNA_F-serratus_M_contig961.20948.1 vs. uniprot
Match: H3G7A1_PHYRM (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7A1_PHYRM)

HSP 1 Score: 231 bits (590), Expect = 1.640e-68
Identity = 117/250 (46.80%), Postives = 159/250 (63.60%), Query Frame = 0
Query:   36 IRLGDTVIFFEGREAIGCDRMKQKTIWQCRHGAFHHDDIVGKPFGCRVFSR--TTKGHVYALSPTPELWCQVVPSRTQIVQDFDQSIVIFRLDLKPGDVVVESGTGSGVMSTAIMRTIAPTGFLHTFEFNEIRAKMAQEEFQQNNIGELGKVLHRDVCAGKNEGGGFGQELEGKADAVFLDLPEPWLAVPHAKLVLKSGKKIASYSPCIEQVMKTCEALRSEGFHSVTTLECRLRPINYAEVQLDTPDFG 283
            I+ G  VI FE   ++     ++  I+Q RHGAF+H+D++G+PFG ++ SR    +G++  L+PTPELW + +  RTQIV   D S + F   L+ G  VVESGTGSG ++T+  RT+AP G + TFEFN +RA++A++EF++N +  +  V  RD C       GF + LEG  D VFLDLP PW+A+ HA  +LK G   ASYSPCIEQV KTC ALR   F  + T+E RL P N   + L  PDFG
Sbjct:    2 IQEGALVILFETHNSLTYCYAQRDAIYQNRHGAFYHNDMIGQPFGSKIISRKKNARGYLILLAPTPELWSRALRHRTQIVFTLDASAISFAAALRSGSRVVESGTGSGALTTSFARTVAPHGHVFTFEFNAVRAEIARQEFKRNGLESVITVECRDACEQ-----GFPEALEGSIDLVFLDLPMPWIAIGHAAKMLKQGGFFASYSPCIEQVQKTCGALRDANFELIRTIETRLVPYNSRRIDLPVPDFG 246          
BLAST of mRNA_F-serratus_M_contig961.20948.1 vs. uniprot
Match: A0A210PQB3_MIZYE (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PQB3_MIZYE)

HSP 1 Score: 236 bits (601), Expect = 1.640e-68
Identity = 124/249 (49.80%), Postives = 163/249 (65.46%), Query Frame = 0
Query:   36 IRLGDTVIFFEGREAIGCDRMKQKTIWQCRHGAFHHDDIVGKPFGCRVFSRTTKGHVYALSPTPELWCQVVPSRTQIVQDFDQSIVIFRLDLKPGDVVVESGTGSGVMSTAIMRTIAPTGFLHTFEFNEIRAKMAQEEFQQNNIGELGKVLHRDVCAGKNEGGGFGQELEGKADAVFLDLPEPWLAVPHAKLVLK-SGKKIASYSPCIEQVMKTCEALRSEGFHSVTTLECRLRPINYAEVQLDTPDFG 283
            I  GDT+I + G E +    MK+   +Q ++GA  H D++G  +G +V  +  KG++Y L PTP+LW Q +P RTQI+   D SIV  +LDLKPG VVVESGTGSG +S +I+RTIAPTG LHTFEF++ RA+ A+EEF ++ + E   V HRDVC         G +LE  ADAVFLDLP PW A+  AK  +K +G ++ S+SPCIEQV ++CE LR  GF  VTT+EC LR  +   V L   D G
Sbjct:   41 IEEGDTIILYLGYENMHAVTMKRGQTFQTKYGAMRHADVIGMDYGSKV--QCPKGYLYVLQPTPDLWTQNLPHRTQILYATDISIVTMQLDLKPGSVVVESGTGSGSLSHSIIRTIAPTGHLHTFEFHQQRAEKAREEFWEHGLKEYVTVAHRDVCQD-------GFDLENIADAVFLDLPRPWEAMSSAKTAMKVTGGRLCSFSPCIEQVQRSCEYLRDLGFEEVTTMECLLRNFDVRTVNLPIVDMG 280          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig961.20948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00145904CE6.430e-6949.80tRNA (adenine(58)-N(1))-methyltransferase catalyti... [more]
A0A1E7FDD0_9STRA6.650e-6946.89tRNA (adenine(58)-N(1))-methyltransferase (Fragmen... [more]
A0A3R7K8S7_9STRA1.230e-6848.03tRNA (adenine(58)-N(1))-methyltransferase n=4 Tax=... [more]
H3G7A1_PHYRM1.640e-6846.80tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=... [more]
A0A210PQB3_MIZYE1.640e-6849.80tRNA (adenine(58)-N(1))-methyltransferase catalyti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014816tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14PFAMPF08704GCD14coord: 90..286
e-value: 8.6E-68
score: 228.7
IPR014816tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14PANTHERPTHR12133UNCHARACTERIZED METHYLTRANSFERASEcoord: 35..493
IPR014816tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14PROSITEPS51620SAM_TRM61coord: 39..494
score: 79.754
NoneNo IPR availableGENE3D3.10.330.20coord: 31..98
e-value: 3.1E-17
score: 64.2
NoneNo IPR availablePANTHERPTHR12133:SF2TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE CATALYTIC SUBUNIT TRMT61Acoord: 35..493
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 36..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig961contigF-serratus_M_contig961:282585..308347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig961.20948.1mRNA_F-serratus_M_contig961.20948.1Fucus serratus malemRNAF-serratus_M_contig961 282471..308627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig961.20948.1 ID=prot_F-serratus_M_contig961.20948.1|Name=mRNA_F-serratus_M_contig961.20948.1|organism=Fucus serratus male|type=polypeptide|length=601bp
MDFRRGREKDGSREVIESPTISEIGGIGNGASAPAIRLGDTVIFFEGREA
IGCDRMKQKTIWQCRHGAFHHDDIVGKPFGCRVFSRTTKGHVYALSPTPE
LWCQVVPSRTQIVQDFDQSIVIFRLDLKPGDVVVESGTGSGVMSTAIMRT
IAPTGFLHTFEFNEIRAKMAQEEFQQNNIGELGKVLHRDVCAGKNEGGGF
GQELEGKADAVFLDLPEPWLAVPHAKLVLKSGKKIASYSPCIEQVMKTCE
ALRSEGFHSVTTLECRLRPINYAEVQLDTPDFGSPVVSLAASSVAASQGQ
VAAPAPPSSGDRDVTEIATGTAKESHAGGSNGVEGTACTPPPQESENGKG
MKSTDRERSGDDSSRVRDREAAVDRVVDYAEAIEHAGQRVVNSGVEDTTT
AVDDSKDHPVTESAKESKKRPRDEPTEGGADTDSTEYGVGRGRNERLQSK
AAIRAAEAAAVNGAKPRMLHKLVCAQPFPVMRGHTAFLTFATTPVAPRLG
SDLGLTTSLKHAEVEEKVNTVDSKGGKLNGDSIGDDGDNQPKSTCVDGHA
GARIVRDGRKGLDVDDEDRKGRIHLAENVEGGHLVHAPDNGALLPPTDRR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014816tRNA_MeTrfase_Gcd14
IPR029063SAM-dependent_MTases