prot_F-serratus_M_contig961.20946.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig961.20946.1
Unique Nameprot_F-serratus_M_contig961.20946.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length100
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig961.20946.1 vs. uniprot
Match: A0A6H5K0D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D2_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 1.600e-47
Identity = 72/99 (72.73%), Postives = 82/99 (82.83%), Query Frame = 0 
Query:    1 MAFRMTGRVLGALQKERNDIQPALRKIWKTYEHTDGLVTRTISPYHLNPFGSFAQSIPKKLKHRFIEHGVEVFMCGAIIYGTYTAHKKGFDQLHKDHRD 99
            MAFRMTGRVLGA+ +ERND+QPALRK+WK YE  DGLV R+ISPY LN   +F  +IPKKLK RFIE+G EV MC  I+YGTYT+HKKGF QLHKDHRD
Sbjct:    1 MAFRMTGRVLGAVARERNDVQPALRKVWKAYEPVDGLVIRSISPYQLNLVRNFVTTIPKKLKTRFIEYGPEVMMCVGIVYGTYTSHKKGFAQLHKDHRD 99
[Close]
BLAST of mRNA_F-serratus_M_contig961.20946.1 vs. uniprot
Match: D7G6P4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P4_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 4.690e-13
Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:    1 MAFRMTGRVLGALQKERNDIQPALRKIWKTYEHTDGLVTR 40
            MAFRMTGRVLGA+ +ERND+QPALRK+WK +E  DGLV+R
Sbjct:    1 MAFRMTGRVLGAVARERNDVQPALRKVWKAHEPVDGLVSR 40
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig961.20946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0D2_9PHAE1.600e-4772.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6P4_ECTSI4.690e-1375.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020101Cytochrome b-c1 complex subunit 8, plantsPFAMPF10890Cyt_b-c1_8coord: 38..98
e-value: 2.8E-5
score: 24.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig961contigF-serratus_M_contig961:262336..273654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig961.20946.1mRNA_F-serratus_M_contig961.20946.1Fucus serratus malemRNAF-serratus_M_contig961 262336..273654 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig961.20946.1 ID=prot_F-serratus_M_contig961.20946.1|Name=mRNA_F-serratus_M_contig961.20946.1|organism=Fucus serratus male|type=polypeptide|length=100bp
MAFRMTGRVLGALQKERNDIQPALRKIWKTYEHTDGLVTRTISPYHLNPF
GSFAQSIPKKLKHRFIEHGVEVFMCGAIIYGTYTAHKKGFDQLHKDHRD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020101Cyt_b-c1_8-plants