prot_F-serratus_M_contig96.20922.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig96.20922.1
Unique Nameprot_F-serratus_M_contig96.20922.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length358
Homology
BLAST of mRNA_F-serratus_M_contig96.20922.1 vs. uniprot
Match: A0A3R7KNM9_9STRA (GCV_T domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KNM9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 8.510e-28
Identity = 119/391 (30.43%), Postives = 176/391 (45.01%), Query Frame = 0
Query:    8 LESRAVLEITGVDAKGLLQGLMTNDMSLLDTDAGSDANNPPSIATAFLSSKGRVLADAIMTRIPR--------HDGKKPL------YKLRSKVKIKDTT---ALYDVSVMGVHDPWQVSSTGNPGKGSHSPAASSSSSDGDDDRLALFEDPRSAKLGRRLIRPKAGNGERSAAWAGLGDEVVSEERYNALRMAHGVGEGEELLNSIPHESNLDLTGSISFTKGCYVGQELTARTQFKGFVRKRLLPVLF--SSADELVKWGSE----------------------GSSGAAPPAPGSNILEEGNGDKKKIGTLVAVSPEYNVGLALLRLSNVIDGALQEANGAAAAKTCGGTMGSFV--VETSPEDGERRRCVPMLPAWWPESLDATTGKV 355
            L +R ++++ G DA   +Q ++TNDM  + T  G       ++  AFL++KGRV+ D  + ++           D  + L      YKLR K+KI+D T   ALY      V +     +   P K      A +   D       ++ DPR    G R + P          +     E+V    Y+  R+  GV EG+EL + IP E+NLDL   +SF KGCYVGQELTARTQFKG +RKRL+P+    S   ++VK  SE                      G      P  G  I+    G  K +GT+V V    +  +A++RL +++    +               G  V  ++ S +DG     +P  P+WWP+ LD  TGK+
Sbjct:   12 LVNRRLMQLQGADAARFVQAVLTNDMKKV-TRRGD------ALYGAFLNTKGRVVGDCTVLQLADDAFLLDYDEDVAEVLQKHWKRYKLRMKLKIEDKTDAYALYAALPASVDE--SDGALRPPAKELDEFKALNPGQDS-----VVYTDPRGDHFGVRAVVPADATLNVPERY-----EMVELSAYSDRRITFGVAEGKELSDGIPLENNLDLLQGVSFRKGCYVGQELTARTQFKGNIRKRLVPMALIPSEQQDVVKTLSELAFKSFDSPSHGALRAYLADSKGWKDVKTPEAGDKIVA--TGATKAVGTIVNVGQNVSSAVAMMRLGHLLPSESEA--------------GEVVPQMQFSTQDGAFH-AIPYQPSWWPQ-LDFKTGKM 365          
BLAST of mRNA_F-serratus_M_contig96.20922.1 vs. uniprot
Match: I2FPK5_USTH4 (Uncharacterized protein n=2 Tax=Ustilago TaxID=5269 RepID=I2FPK5_USTH4)

HSP 1 Score: 121 bits (304), Expect = 1.510e-27
Identity = 121/372 (32.53%), Postives = 170/372 (45.70%), Query Frame = 0
Query:   11 RAVLEITGVDAKGLLQGLMTNDMSLLD-TDAGSDANNPPSIATAFLSSKGRVLADAIMTRIPRHDGKKPL-------------------YKLRSKVKIKDTTALYDVSVMGVHDPWQVSSTGNPGKGSHSPAASSSSSDGDDDRLALFEDPRSAKLGRRLIRPKAGNGERSAAWAGLGDEVVSEERYNALRMAHGVGEGEELL---NSIPHESNLDLTGSISFTKGCYVGQELTARTQFKGFVRKRLLPVLF----SSADELVKWGSEGSSGAAP-PAPGSNILEE--GNGDKKKIGTLVA---VSPEYNVGLALLRLSNVIDGALQEANGAAAAKTCGGTMGSFVVETSPEDGERRRCV-PMLPAWWPESL 348
            R VLE +G D   L+QGL++ND+  LD T   S+ ++P  + + F++ +GR+LADA +   P  +   P                    +KLRSKVK+ D +A + V        W  S++  P     S A S        ++LAL  DPR   +G R +     + +      G+   VV  E Y   R+ +G+GEG       +S+P E+NLD    + F KGCYVGQELTART   G VRKRLLP+ F    S A   +   S   SG+   P   + +  +   +G+ K+     A    S  YNVGL  LRL  V          + A K  G       +     DGE    V P +P WWP+ L
Sbjct:   64 RGVLEASGRDTVKLIQGLVSNDVKPLDPTKTCSNLDSPALVYSGFMNPQGRMLADAFIHPQPALEDGSPRWLLDVDSRTLPSLLAFIKKFKLRSKVKLTDVSAQHQVV-----QAWHSSTSSQP-----SQAIS--------EKLAL--DPRCPAIGYRGVL----SSDSDLTLGGV--NVVEGEEYTLHRILNGIGEGSLDFPEGSSLPLENNLDYMNGVDFKKGCYVGQELTARTHHTGVVRKRLLPLTFYLAGSPAPTSLSLASVDRSGSIQLPNHLTEVRSKPVSSGEAKQARGKAAGKFTSGVYNVGLGCLRLEQV-------QRWSEAGKEDG-----LEMSIKAADGETTLMVRPWIPNWWPKKL 397          
BLAST of mRNA_F-serratus_M_contig96.20922.1 vs. uniprot
Match: A0A2P4YDZ6_9STRA (Mitochondrial protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDZ6_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.260e-27
Identity = 124/402 (30.85%), Postives = 173/402 (43.03%), Query Frame = 0
Query:    8 LESRAVLEITGVDAKGLLQGLMTNDMSLLDTDAGSDANNPPSIATAFLSSKGRVLADA-----------------IMTRIPRHDGKKPLYKLRSKVKIKDTT---ALYDVSVMGVHD-----PWQVSS-----TGNPGKGSHSPAASSSSSDGDDDRLALFEDPRSAKLGRRLIRPKAGNGERSAAWAGLGDEVVSEERYNALRMAHGVGEGEELLNSIPHESNLDLTGSISFTKGCYVGQELTARTQFKGFVRKRLLPVLF--SSADELVKWGSE----------------------GSSGAAPPAPGSNILEEGNGDKKKIGTLVAVSPEYNVGLALLRLSNVIDGALQEANGAAAAKTCGGTMGSFVVETSPEDGERRRCVPMLPAWWPESLDATTGKV 355
            L  R + ++ G DA   +Q ++TNDM+ + T  G       +I   FL++KGRV+ D                  +   + +H  +   YKLR K+KI+D T   ALY      V +     P  V +     T NPG                 D   ++ DPR    G R I P   +      +     E +    Y   R+A GV EG+EL++ IP E NLDL   +SF KGCYVGQELTARTQFKG +RKRL+PV    S   ++VK  SE                      G      P  G  I+    G+ K +G +  V    +  LA++RL N++     E+       T         ++ S  DG     VP  P+WWP+ LD  TGK+
Sbjct:   12 LVHRRLTQLQGADASRFIQAVLTNDMTRV-THRGD------AIYGGFLTTKGRVVGDCNVLQLADDTFLLDYDEEVAESLMKHWKR---YKLRMKLKIEDKTDAFALYATLPPVVDEADGALPSSVKTLDELQTLNPG-----------------DNTVVYADPRGDHFGVRAIVPADESLNMPEEY-----ETMDTSAYLDHRIALGVAEGKELVDGIPLECNLDLMQGVSFRKGCYVGQELTARTQFKGNIRKRLVPVALIPSEQQDVVKALSELAFKPFDEPSHGALRSYLASSKGWKDVKAPEIGDKIVA--TGETKAVGKIFNVGQGVSSALAMMRLGNLLP---SESETGEVVPT---------MKFSTHDGAFH-AVPYQPSWWPQ-LDFKTGKM 365          
BLAST of mRNA_F-serratus_M_contig96.20922.1 vs. uniprot
Match: K3WUH9_GLOUD (GCV_T domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUH9_GLOUD)

HSP 1 Score: 119 bits (299), Expect = 4.760e-27
Identity = 118/398 (29.65%), Postives = 176/398 (44.22%), Query Frame = 0
Query:    8 LESRAVLEITGVDAKGLLQGLMTNDMSLLDTDAGSDANNPPSIATAFLSSKGRVLADAIMTR-----------------IPRHDGKKPLYKLRSKVKIKDTTALYDV-----SVMGVHDPWQVSSTGNPGKGSHSPAASSSSSDGDDDRLALFEDPRSAKLGRRLIRPKAGNGERSAAWAGLGD--EVVSEERYNALRMAHGVGEGEELLNSIPHESNLDLTGSISFTKGCYVGQELTARTQFKGFVRKRLLPVLFSSADE--------------------------LVKWGSEGSSGAAPPAPGSNILEEGNGDKKKIGTLVAVSPEYNVGLALLRLSNVIDGALQEANGAAAAKTCGGTMGSFVVETSPEDGERRRCVPMLPAWWPESLDATTGKV 355
            L +R +L++ GVDA   LQ ++TNDM        S A    ++   FL++KGR+L D  + +                 + +H  +   YKLR KVK++D + +        +++   D    S   N      +    +S+     D +A F DPR  + G R I P       ++    + D  E +    YN  R+  G  EG+EL + IP ESNL+L   +SF KGCYVGQELTARTQFKG VRKR++P++   +D+                          LV   S     A  P  G  I++ G+   K +GT+V V  E    +A++RL +++    +E N            G F              +P  P WWP +LD  TGK+
Sbjct:   13 LANRRLLQLQGVDASRFLQAILTNDMK-------SVAKPGDALYGGFLTTKGRLLGDCSVVQTQEDTFLLDYDESVSEDLMKHWKR---YKLRMKVKLEDKSDVLSTYATLPALISADDTCDYSVLENE---LETVLQINSALQDAKDGIA-FVDPRGKEFGVRAILP-------ASETLNVPDNYETLDLAAYNDRRIFLGAAEGKELSDGIPLESNLELLHGVSFRKGCYVGQELTARTQFKGNVRKRIVPLVLIPSDQQDVITALSELSFQRIDSPSHASLREYLVNSASR--KDAVSPEQGGKIVKTGS--TKAVGTIVNVGNELPTAIAMMRLEHLLPKE-EEDNEVVPQMQFTTLEGDF------------HAIPYQPTWWP-ALDLATGKM 371          
BLAST of mRNA_F-serratus_M_contig96.20922.1 vs. uniprot
Match: A0A3M6VDT1_9STRA (GCV_T domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDT1_9STRA)

HSP 1 Score: 119 bits (298), Expect = 6.070e-27
Identity = 117/402 (29.10%), Postives = 174/402 (43.28%), Query Frame = 0
Query:    8 LESRAVLEITGVDAKGLLQGLMTNDMSLLDTDAGSDANNPPSIATAFLSSKGRVLADAIMTRIPRH----DGKKPL----------YKLRSKVKIKDTTALYDV-----SVMG-----------VHDPWQVSSTGNPGKGSHSPAASSSSSDGDDDRLALFEDPRSAKLGRRLIRPKAGNGERSAAWAGLGDEVVSEERYNALRMAHGVGEGEELLNSIPHESNLDLTGSISFTKGCYVGQELTARTQFKGFVRKRLLPVLFSSADE--LVK----------------------WGSEGSSGAAPPAPGSNILEEGNGDKKKIGTLVAVSPEYNVGLALLRLSNVIDGALQEANGAAAAKTCGGTMGSFVVETSPEDGERRRCVPMLPAWWPESLDATTGKV 355
            L +R + ++ G DA   LQ ++TNDM LL       A    +I   FLS+KGRV+ D  + ++       D  K +          YKLR K+ ++D T  +D+     ++M            + D  Q+ +TG                    +   ++ DPR    G R + P       +      G E +    Y   R+A GV EG+EL++ IP E NLDL   +SF KGCYVGQELTARTQFKG +RKRL+PV    A++  +VK                       GS+       P  G  I+    G+ K +GT+  V  + +  +A++RL +++  A          K        F+ +    DG     VP  P+WW   L+  TGK+
Sbjct:   13 LVNRKLTQLEGSDASRFLQAVLTNDMKLL-------ARCGDAIYGGFLSTKGRVVGDCNVLQVGDDAFLLDYDKEIDEQLMKHLKRYKLRMKINMEDKTDAFDLYATLPAIMDEEDISIPPSVKILDELQMINTG--------------------ENAMIYPDPRGDHFGVRALIPAD-----TTFNTPKGYETMEMSAYLDHRVALGVAEGKELVDGIPLECNLDLLQGVSFRKGCYVGQELTARTQFKGNIRKRLVPVALIPAEQEDVVKNLSELAFKPFDAPSHRALRAYLAGSKDWKDVKAPEIGDKIVA--TGETKAVGTIFNVGRDVSSAIAMMRLGHLLHSASDNGESVPTNK--------FLTQ----DGAFY-AVPYQPSWW-RQLNFETGKM 366          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3R7KNM9_9STRA8.510e-2830.43GCV_T domain-containing protein n=4 Tax=Phytophtho... [more]
I2FPK5_USTH41.510e-2732.53Uncharacterized protein n=2 Tax=Ustilago TaxID=526... [more]
A0A2P4YDZ6_9STRA2.260e-2730.85Mitochondrial protein n=1 Tax=Phytophthora palmivo... [more]
K3WUH9_GLOUD4.760e-2729.65GCV_T domain-containing protein n=1 Tax=Globispora... [more]
A0A3M6VDT1_9STRA6.070e-2729.10GCV_T domain-containing protein n=2 Tax=Peronospor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027266GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1GENE3D3.30.1360.120coord: 2..314
e-value: 5.1E-37
score: 129.6
IPR017703YgfZ/GcvT conserved siteTIGRFAMTIGR03317TIGR03317coord: 176..237
e-value: 4.9E-20
score: 69.3
NoneNo IPR availablePANTHERPTHR22602UNCHARACTERIZEDcoord: 7..74
NoneNo IPR availablePANTHERPTHR22602:SF0TRANSFERASE CAF17, MITOCHONDRIAL-RELATEDcoord: 80..347
NoneNo IPR availablePANTHERPTHR22602:SF0TRANSFERASE CAF17, MITOCHONDRIAL-RELATEDcoord: 7..74
NoneNo IPR availablePANTHERPTHR22602UNCHARACTERIZEDcoord: 80..347
NoneNo IPR availableSUPERFAMILY103025Folate-binding domaincoord: 6..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:708951..716491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20922.1mRNA_F-serratus_M_contig96.20922.1Fucus serratus malemRNAF-serratus_M_contig96 708951..716491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig96.20922.1 ID=prot_F-serratus_M_contig96.20922.1|Name=mRNA_F-serratus_M_contig96.20922.1|organism=Fucus serratus male|type=polypeptide|length=358bp
FASVAAILESRAVLEITGVDAKGLLQGLMTNDMSLLDTDAGSDANNPPSI
ATAFLSSKGRVLADAIMTRIPRHDGKKPLYKLRSKVKIKDTTALYDVSVM
GVHDPWQVSSTGNPGKGSHSPAASSSSSDGDDDRLALFEDPRSAKLGRRL
IRPKAGNGERSAAWAGLGDEVVSEERYNALRMAHGVGEGEELLNSIPHES
NLDLTGSISFTKGCYVGQELTARTQFKGFVRKRLLPVLFSSADELVKWGS
EGSSGAAPPAPGSNILEEGNGDKKKIGTLVAVSPEYNVGLALLRLSNVID
GALQEANGAAAAKTCGGTMGSFVVETSPEDGERRRCVPMLPAWWPESLDA
TTGKVAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027266TrmE/GcvT_dom1
IPR017703YgfZ/GcvT_CS