prot_F-serratus_M_contig96.20916.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig96.20916.1
Unique Nameprot_F-serratus_M_contig96.20916.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length512
Homology
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: UPI000C1D7F5A (protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 n=3 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D7F5A)

HSP 1 Score: 62.8 bits (151), Expect = 1.250e-6
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 0
Query:  436 LMALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNILLAYRSM 509
            L  +  EL CP+CL L   A  L C+H FC +C+    RST   +CP+CKVP  +R+++    + N++  Y+SM
Sbjct:    7 LEKMGRELKCPICLSLLNSAVSLTCNHVFCNSCLEKSMRSTS--DCPVCKVPYRRREIRPSPHMDNLVSIYKSM 78          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A668RXN3_OREAU (Uncharacterized protein n=1 Tax=Oreochromis aureus TaxID=47969 RepID=A0A668RXN3_OREAU)

HSP 1 Score: 59.7 bits (143), Expect = 1.950e-6
Identity = 25/66 (37.88%), Postives = 41/66 (62.12%), Query Frame = 0
Query:  437 MALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNI 502
            MA  ++L CPVCL +F+D  +LPCSH FC  C++  +R     +CP+C+  +   D   ++ L+N+
Sbjct:   17 MAARSDLCCPVCLDIFKDPVLLPCSHSFCKDCLDSWWRKNPAHDCPVCQKQSTMHDPPCNLALKNL 82          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: UPI0009A31CEB (E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A31CEB)

HSP 1 Score: 61.6 bits (148), Expect = 2.380e-6
Identity = 34/78 (43.59%), Postives = 44/78 (56.41%), Query Frame = 0
Query:  438 ALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRST---KKQECPLC-KVPAWKRDLKRDVPLQNILLAYRSMTS 511
            AL  ELTC VCL +++D   LPC H FCL CI G +  T   +K ECP C +    K  L+R+  L NI+  Y+   S
Sbjct:    5 ALEDELTCSVCLRMYQDPVTLPCQHSFCLNCIEGVWAQTTGPRKFECPQCHRKFKHKPTLERNATLYNIVAKYKQTQS 82          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A8C0YH75_CYPCA (RING-type domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C0YH75_CYPCA)

HSP 1 Score: 58.2 bits (139), Expect = 3.100e-6
Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 0
Query:  436 LMALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFR-STKKQECPLCK-VPAWKRDLKRDVPLQNILLAYR 507
            L+ L  ELTC +CLCLFE+   L C H FC  C+   +  S     CP C+ V   K +LK++  L  +L AYR
Sbjct:    7 LLGLEEELTCSICLCLFENPVSLICGHSFCANCLEATWNDSVSSMSCPQCRMVFLSKPELKKNTVLSAVLDAYR 80          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A3Q1F0G3_9TELE (RING-type domain-containing protein n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1F0G3_9TELE)

HSP 1 Score: 57.4 bits (137), Expect = 3.170e-6
Identity = 32/81 (39.51%), Postives = 43/81 (53.09%), Query Frame = 0
Query:  430 SATTEGLMALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQE--CPLCKVP-AWKRDLKRDVPLQNILLAYR 507
            SA +E    L  ELTCPVCL L+ D H+LPC H FC TC++   R   +    CP C+       + +++  L NI   YR
Sbjct:    3 SAPSEQSSVLQEELTCPVCLDLYRDPHLLPCGHNFCKTCLDRLKRQADRGRFRCPECRDSHRCSTNFQKNFKLANIADDYR 83          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A147AL44_FUNHE (Tripartite motif-containing protein 16 n=3 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A147AL44_FUNHE)

HSP 1 Score: 60.8 bits (146), Expect = 3.500e-6
Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 0
Query:  437 MALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNI 502
            MA   +L CPVC+ +F D  +LPCSH FC TC+   +   K +ECPLCK  + +R+   ++ L+N+
Sbjct:    1 MARPEDLHCPVCIEMFRDPVILPCSHSFCKTCLQYWWEEKKAKECPLCKNISVEREGLCNLVLKNL 66          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: UPI00053FC84D (protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FC84D)

HSP 1 Score: 61.2 bits (147), Expect = 3.720e-6
Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 0
Query:  433 TEGLMALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNILLAYRSM 509
            T  L  +  EL CP+CL L++ A  L C+H FC +CI+   +S     CP+CKVP  +R+++    + N++  Y+SM
Sbjct:    4 TSHLERMGRELKCPICLSLYDSAISLTCNHVFCHSCIHKSMKSGSN--CPVCKVPYHRREIRPAPHMDNLVNIYKSM 78          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A068UDE1_COFCA (Uncharacterized protein n=5 Tax=Coffea TaxID=13442 RepID=A0A068UDE1_COFCA)

HSP 1 Score: 61.2 bits (147), Expect = 3.820e-6
Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 0
Query:  430 SATTEGLMALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNILLAYRSM 509
            +A T  L  +  EL CP+CL L   A  L C+H FC  CI    +S    +CP+CKVP  +R+++    + N++  Y+SM
Sbjct:   40 AADTSHLEKMGRELKCPICLSLLNSAVSLSCNHVFCNCCIEKSMKSAS--DCPVCKVPFRRREIRPAPHMDNLVSIYKSM 117          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A1D1YZN0_9ARAE (Protein BREAST CANCER SUSCEPTIBILITY 1 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YZN0_9ARAE)

HSP 1 Score: 61.2 bits (147), Expect = 3.870e-6
Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 0
Query:  434 EGLMALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNILLAYRSM 509
            E L  +  EL CP+CL L   A  L C+H FC +CI+   +S     CP+CKVP  +R+++    + N++  Y+SM
Sbjct:    3 EHLERMGRELKCPICLSLLRSAVSLVCNHVFCSSCISESMKSASN--CPVCKVPYHRREVRPSPHMDNLVTIYKSM 76          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A8C3ZBM3_9TELE (Tripartite motif containing 13 n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZBM3_9TELE)

HSP 1 Score: 60.1 bits (144), Expect = 4.800e-6
Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = 0
Query:  439 LAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQ-ECPLCKVPA 488
            L  +LTCP+C CLFED  VLPCSH FC TC++G     +    CP C+  A
Sbjct:   19 LEEDLTCPICCCLFEDPRVLPCSHSFCRTCLDGVAHGGRPPLRCPTCRQEA 69          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C1D7F5A1.250e-639.19protein BREAST CANCER SUSCEPTIBILITY 1 homolog iso... [more]
A0A668RXN3_OREAU1.950e-637.88Uncharacterized protein n=1 Tax=Oreochromis aureus... [more]
UPI0009A31CEB2.380e-643.59E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Rhin... [more]
A0A8C0YH75_CYPCA3.100e-641.89RING-type domain-containing protein n=1 Tax=Cyprin... [more]
A0A3Q1F0G3_9TELE3.170e-639.51RING-type domain-containing protein n=1 Tax=Acanth... [more]
A0A147AL44_FUNHE3.500e-642.42Tripartite motif-containing protein 16 n=3 Tax=Fun... [more]
UPI00053FC84D3.720e-637.66protein BREAST CANCER SUSCEPTIBILITY 1 homolog iso... [more]
A0A068UDE1_COFCA3.820e-637.50Uncharacterized protein n=5 Tax=Coffea TaxID=13442... [more]
A0A1D1YZN0_9ARAE3.870e-638.16Protein BREAST CANCER SUSCEPTIBILITY 1 (Fragment) ... [more]
A0A8C3ZBM3_9TELE4.800e-650.98Tripartite motif containing 13 n=1 Tax=Denticeps c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006642Zinc finger, Rad18-type putativeSMARTSM00734c2hc_5coord: 359..383
e-value: 0.065
score: 19.7
coord: 201..225
e-value: 0.4
score: 14.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 204..365
e-value: 3.3
score: 6.8
coord: 445..484
e-value: 1.1E-5
score: 34.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 445..485
score: 12.253
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 395..509
e-value: 3.8E-18
score: 67.2
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 445..484
e-value: 4.5E-7
score: 29.6
IPR031099BRCA1-associatedPANTHERPTHR13763BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1coord: 433..509
IPR011364Breast cancer type 1 susceptibility protein (BRCA1)PANTHERPTHR13763:SF0BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEINcoord: 433..509
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 460..469
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 435..508

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:482273..490408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20916.1mRNA_F-serratus_M_contig96.20916.1Fucus serratus malemRNAF-serratus_M_contig96 481479..490524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig96.20916.1 ID=prot_F-serratus_M_contig96.20916.1|Name=mRNA_F-serratus_M_contig96.20916.1|organism=Fucus serratus male|type=polypeptide|length=512bp
MPGGLAEWLHDSSVVERRDDNKKREASSNNAKASSSPRTRISRPRGQPST
ESVASSPTNAVIDVDTGTPDAPACHERGLDVQILPSKPPKVPWDPFDRGT
VDTKDDAFARLLSGRSSATKTRPNQSLVAPSTPKPHTSSSWDPFAADDGK
ENRRTSAFSKLLSPKRQACGTPTNFSGGSKRKRTIGSSSSADPKLAAATR
FCECPICGERVIIDLCSKHLDTECRGPAAIKNTPHESRSPSPPPARGEAN
ETPLTFKKLPAVVTPSDKASKKNSPRSTELTSPLAKACREATGSDTQRAA
SAIEASPSATPCAKRQHGGALAGRTTTCASRFEPPSSLRSWTMRDSATTS
TTSSEPAAVTSCPVCGKRVRADLCSLHLDTDCFGSSSACSPSKSGEVLTS
EARDGEEGEKVVRKDMSSEGDQRGGGKDGSATTEGLMALAAELTCPVCLC
LFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQ
NILLAYRSMTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006642Znf_Rad18_put
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR031099BRCA1-associated
IPR011364BRCA1
IPR017907Znf_RING_CS