prot_F-serratus_M_contig96.20916.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig96.20916.1
Unique Nameprot_F-serratus_M_contig96.20916.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length512
Homology
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A6H5KLF7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF7_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 3.370e-68
Identity = 189/511 (36.99%), Postives = 250/511 (48.92%), Query Frame = 0
Query:   64 VDTGTPDAPACHERGLDVQILPSKPPKVPWDPFDRGTVDTKDDAFARLLSGR-----SSATKTRPNQSLVAPSTPKPHTSSSWDPFAAD-DGK---------------------ENRRTSAFSKLLSPKRQACGTPTNFSGGSKRKRTIGSSSSADPKLAAATRFCECPICGERVIIDLCSKHLDTECRGPAAIKNTPHESRSPSPPPARGEANETPLTFKKLPAVVTPSDKASKKNSPRSTELTSPLAKACR---------EATGSDTQRAASAIEASPSATPCAKRQHGGALAGRTTTCASRFEPPSSLRSWTM--------------------RDSATTSTTSSEPAAVTSCPVCGKRVRADLCSLHLDTDCFGSSSACSPSKSG-------EVLTSEARDGEEGEKVVRKDMSSEGDQRGGGKDGSATTEGLMALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNILLAYRSMTS 511
            VD   P +  C  RG      P    K  WDPF     D ++DAFARLLS       SS T    +Q    P+      SSSWDPFA+  DGK                     + R   + +K    KR A G+ T  S  +      G + +A+    A TRFCECP+CG+RV+I++CSKHLDTEC G  A             PPA  E  ++PL+        T S  AS+   P +   ++  A +CR         E  G D++   +A  A  +     ++  G A +      AS F  P++  ++                      R        ++E  A+T+CPVCGK+++ADLCSLHLDTDC G     +PS  G       EV +    + + G+ V +KD+            GS    GL ALAAELTCP+CLC+FEDAH LPCSHRFCL CI GCF+S+K+QECPLCK+PAWKRDL RDV +QNI+ AYR M +
Sbjct:    7 VDEAAPSS-TCVTRGQGP--APGSAEKEAWDPFGS---DCREDAFARLLSAANRPAGSSTTTASTSQPAAGPA------SSSWDPFASTGDGKXXXXXXXXXXXXXXXXXXXXSKGRSGPSSAKR---KRPAVGS-TLLSAAAAGGARAGGAGNAE----ALTRFCECPVCGKRVLIEMCSKHLDTECNGLDAT------------PPAATETAKSPLS------AATESRGASEPIPPATPPPSALAAGSCRSVLASPPLEEGKGDDSRARTAARVAEDAPRGQGQQPSGDAASSSARAAASTFPAPAASPAFEXXXXXXXXXXXXXXXXXXSRARKLGRKRVAAAE--AMTACPVCGKQIQADLCSLHLDTDCSG----VTPSGGGLKEEVRDEVGSGNGGEADSGKAVPKKDV------------GSEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMAA 461          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: D8LC67_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC67_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 3.650e-48
Identity = 86/153 (56.21%), Postives = 106/153 (69.28%), Query Frame = 0
Query:  359 VTSCPVCGKRVRADLCSLHLDTDCFGSSSACSPSKSGEVLTSEARDGEEGEKVVRKDMSSEGDQRGGGKDGSATTEGLMALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNILLAYRSMTS 511
            +T+CPVCG++V+ADLCSLHLDTDC G           EV +    + + G+ V ++D             GS    GL ALAAELTCP+CLC+FEDAH LPCSHRFCL CI GCF+S+K+QECPLCK+PAWKRDL RDV +QNI+ AYR M +
Sbjct:    1 MTTCPVCGEQVQADLCSLHLDTDCSGGGRK--EEVRDEVGSGNGGEADSGKTVPKRDT------------GSEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMAA 139          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A8J5XEH0_DIALT (RING-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEH0_DIALT)

HSP 1 Score: 77.8 bits (190), Expect = 1.970e-11
Identity = 37/82 (45.12%), Postives = 49/82 (59.76%), Query Frame = 0
Query:  424 GGGKDGSATTEGL--MALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNIL 503
            GGG        GL    L AEL C +CL  F+D H LPC H FCL+CI     +T+  +CPLC+ PAW+R L+++  L NI+
Sbjct:  471 GGGARALPAANGLPLACLEAELCCQICLATFDDPHSLPCQHTFCLSCIISHMVATRVNDCPLCRQPAWRRQLRKNHKLANIV 552          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A8D2JAN2_VARKO (RING-type domain-containing protein n=1 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2JAN2_VARKO)

HSP 1 Score: 64.3 bits (155), Expect = 5.550e-9
Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 0
Query:  431 ATTEGLMALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCF--RSTKKQECPLCKVPAWKRDLKRDVPLQNI 502
            A+   + ++A +L CP+CL +F+D H+L CSH FC +C+  CF  +   K  CP C+ P   +D  R+  L N+
Sbjct:    2 ASVREVSSIAEDLLCPICLSIFQDPHMLACSHNFCFSCLESCFTAKGQHKGLCPECRAPFDLQDAVRNRVLSNL 75          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A4W3GZY8_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GZY8_CALMI)

HSP 1 Score: 63.2 bits (152), Expect = 6.710e-8
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0
Query:  438 ALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNILLAYRSMT 510
            +LA +LTCPVCL LF D   L C H FC +CI GC+   +   CP C+     R+L+   PL N+    R+++
Sbjct:    9 SLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQEAHSCPECRRACPGRELRASRPLANLSERARNLS 81          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: UPI001C3FC9B5 (nuclear factor 7, brain-like n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3FC9B5)

HSP 1 Score: 63.2 bits (152), Expect = 1.230e-7
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0
Query:  438 ALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNILLAYRSMT 510
            +LA +LTCPVCL LF D   L C H FC +CI GC+   +   CP C+     R+L+   PL N+    R+++
Sbjct:    9 SLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQETHSCPECRRACPGRELRASRPLANLSERARNLS 81          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: UPI001CF77070 (E3 ubiquitin-protein ligase TRIM31-like n=1 Tax=Varanus komodoensis TaxID=61221 RepID=UPI001CF77070)

HSP 1 Score: 64.3 bits (155), Expect = 3.200e-7
Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 0
Query:  431 ATTEGLMALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCF--RSTKKQECPLCKVPAWKRDLKRDVPLQNI 502
            A+   + ++A +L CP+CL +F+D H+L CSH FC +C+  CF  +   K  CP C+ P   +D  R+  L N+
Sbjct:    2 ASVREVSSIAEDLLCPICLSIFQDPHMLACSHNFCFSCLESCFTAKGQHKGLCPECRAPFDLQDAVRNRVLSNL 75          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A1A8CJW4_9TELE (RING-type domain-containing protein (Fragment) n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8CJW4_9TELE)

HSP 1 Score: 57.8 bits (138), Expect = 3.850e-7
Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 0
Query:  430 SATTEGLMALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQE--CPLCKV 486
            SA  E  + L  ELTCPVCL L+ D H+LPC H FC TC++   R   +    CP C++
Sbjct:    3 SAPPEHCIVLQEELTCPVCLDLYRDPHLLPCGHNFCKTCLDRLKRRADRGRLHCPECRI 61          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A3Q3EGQ7_9LABR (Zinc-binding protein A33-like n=3 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3EGQ7_9LABR)

HSP 1 Score: 63.2 bits (152), Expect = 6.040e-7
Identity = 27/47 (57.45%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  439 LAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCK 485
            L  +LTCPVCLC+F D  +LPCSH FC  C+ G  +  KK  CPLCK
Sbjct:   16 LQKDLTCPVCLCIFRDPVLLPCSHSFCRECLQGALKRNKK--CPLCK 60          
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Match: A0A4W3GVR5_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GVR5_CALMI)

HSP 1 Score: 62.0 bits (149), Expect = 9.210e-7
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0
Query:  438 ALAAELTCPVCLCLFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQNILLAYRSMT 510
            +LA +LTCPVCL LF D   L C H FC +CI GC+   +   CP C+     R+L+   PL N+    R+++
Sbjct:    9 SLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQEAHFCPECRRACPGRELRASRPLANLSERARNLS 81          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLF7_9PHAE3.370e-6836.99RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LC67_ECTSI3.650e-4856.21RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A8J5XEH0_DIALT1.970e-1145.12RING-type domain-containing protein n=1 Tax=Diacro... [more]
A0A8D2JAN2_VARKO5.550e-937.84RING-type domain-containing protein n=1 Tax=Varanu... [more]
A0A4W3GZY8_CALMI6.710e-841.10Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]
UPI001C3FC9B51.230e-741.10nuclear factor 7, brain-like n=1 Tax=Callorhinchus... [more]
UPI001CF770703.200e-737.84E3 ubiquitin-protein ligase TRIM31-like n=1 Tax=Va... [more]
A0A1A8CJW4_9TELE3.850e-745.76RING-type domain-containing protein (Fragment) n=1... [more]
A0A3Q3EGQ7_9LABR6.040e-757.45Zinc-binding protein A33-like n=3 Tax=Labrus bergy... [more]
A0A4W3GVR5_CALMI9.210e-741.10Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006642Zinc finger, Rad18-type putativeSMARTSM00734c2hc_5coord: 359..383
e-value: 0.065
score: 19.7
coord: 201..225
e-value: 0.4
score: 14.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 204..365
e-value: 3.3
score: 6.8
coord: 445..484
e-value: 1.1E-5
score: 34.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 445..485
score: 12.253
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 395..509
e-value: 3.8E-18
score: 67.2
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 445..484
e-value: 4.5E-7
score: 29.6
IPR031099BRCA1-associatedPANTHERPTHR13763BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1coord: 433..509
IPR011364Breast cancer type 1 susceptibility protein (BRCA1)PANTHERPTHR13763:SF0BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEINcoord: 433..509
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 460..469
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 435..508

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:482273..490408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20916.1mRNA_F-serratus_M_contig96.20916.1Fucus serratus malemRNAF-serratus_M_contig96 481479..490524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig96.20916.1 ID=prot_F-serratus_M_contig96.20916.1|Name=mRNA_F-serratus_M_contig96.20916.1|organism=Fucus serratus male|type=polypeptide|length=512bp
MPGGLAEWLHDSSVVERRDDNKKREASSNNAKASSSPRTRISRPRGQPST
ESVASSPTNAVIDVDTGTPDAPACHERGLDVQILPSKPPKVPWDPFDRGT
VDTKDDAFARLLSGRSSATKTRPNQSLVAPSTPKPHTSSSWDPFAADDGK
ENRRTSAFSKLLSPKRQACGTPTNFSGGSKRKRTIGSSSSADPKLAAATR
FCECPICGERVIIDLCSKHLDTECRGPAAIKNTPHESRSPSPPPARGEAN
ETPLTFKKLPAVVTPSDKASKKNSPRSTELTSPLAKACREATGSDTQRAA
SAIEASPSATPCAKRQHGGALAGRTTTCASRFEPPSSLRSWTMRDSATTS
TTSSEPAAVTSCPVCGKRVRADLCSLHLDTDCFGSSSACSPSKSGEVLTS
EARDGEEGEKVVRKDMSSEGDQRGGGKDGSATTEGLMALAAELTCPVCLC
LFEDAHVLPCSHRFCLTCINGCFRSTKKQECPLCKVPAWKRDLKRDVPLQ
NILLAYRSMTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006642Znf_Rad18_put
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR031099BRCA1-associated
IPR011364BRCA1
IPR017907Znf_RING_CS