prot_F-serratus_M_contig96.20915.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig96.20915.1
Unique Name	prot_F-serratus_M_contig96.20915.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	154

Homology

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BLAST of mRNA_F-serratus_M_contig96.20915.1 vs. uniprot
Match: A0A1Y1XLM2_9FUNG (Ubiquitin n=2 Tax=Zoopagomycota TaxID=1913638 RepID=A0A1Y1XLM2_9FUNG)

HSP 1 Score: 284 bits (727), Expect = 9.950e-97
Identity = 146/152 (96.05%), Postives = 148/152 (97.37%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
            MQIFVKTLTGKTITL+VE SDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

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BLAST of mRNA_F-serratus_M_contig96.20915.1 vs. uniprot
Match: J4C7J8_THEOR (Ubiquitin n=4 Tax=cellular organisms TaxID=131567 RepID=J4C7J8_THEOR)

HSP 1 Score: 284 bits (727), Expect = 1.070e-96
Identity = 145/153 (94.77%), Postives = 149/153 (97.39%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 153
            MQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 153

[Close]

BLAST of mRNA_F-serratus_M_contig96.20915.1 vs. uniprot
Match: A0A078A4M5_STYLE (Ubiquitin c n=10 Tax=Alveolata TaxID=33630 RepID=A0A078A4M5_STYLE)

HSP 1 Score: 286 bits (733), Expect = 1.640e-96
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 153
            MQIFVKTLTGKTITLDVEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

[Close]

BLAST of mRNA_F-serratus_M_contig96.20915.1 vs. uniprot
Match: V5AYC1_TOXGV (Putative polyubiquitin UbC n=1 Tax=Toxoplasma gondii (strain ATCC 50861 / VEG) TaxID=432359 RepID=V5AYC1_TOXGV)

HSP 1 Score: 286 bits (733), Expect = 1.750e-96
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 153
            MQIFVKTLTGKTITLDVEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

[Close]

BLAST of mRNA_F-serratus_M_contig96.20915.1 vs. uniprot
Match: A0A820LZQ3_9BILA (Hypothetical protein (Fragment) n=2 Tax=Spiralia TaxID=2697495 RepID=A0A820LZQ3_9BILA)

HSP 1 Score: 286 bits (733), Expect = 2.010e-96
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 153
            MQIFVKTLTGKTITL+VEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig96.20915.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig96.20915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1Y1XLM2_9FUNG	9.950e-97	96.05	Ubiquitin n=2 Tax=Zoopagomycota TaxID=1913638 RepI...	[more]
J4C7J8_THEOR	1.070e-96	94.77	Ubiquitin n=4 Tax=cellular organisms TaxID=131567 ...	[more]
A0A078A4M5_STYLE	1.640e-96	95.42	Ubiquitin c n=10 Tax=Alveolata TaxID=33630 RepID=A...	[more]
V5AYC1_TOXGV	1.750e-96	95.42	Putative polyubiquitin UbC n=1 Tax=Toxoplasma gond...	[more]
A0A820LZQ3_9BILA	2.010e-96	95.42	Hypothetical protein (Fragment) n=2 Tax=Spiralia T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin	PRINTS	PR00348	UBIQUITIN	coord: 32..52 score: 95.05 coord: 11..31 score: 74.16 coord: 53..74 score: 92.03
IPR000626	Ubiquitin domain	SMART	SM00213	ubq_7	coord: 1..72 e-value: 2.9E-35 score: 133.1 coord: 77..148 e-value: 2.9E-35 score: 133.1
IPR000626	Ubiquitin domain	PFAM	PF00240	ubiquitin	coord: 3..74 e-value: 1.5E-33 score: 114.4 coord: 79..150 e-value: 1.5E-33 score: 114.4
IPR000626	Ubiquitin domain	PROSITE	PS50053	UBIQUITIN_2	coord: 77..152 score: 30.67
IPR000626	Ubiquitin domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..76 score: 30.67
None	No IPR available	GENE3D	3.10.20.90		coord: 1..76 e-value: 2.1E-45 score: 154.9 coord: 77..153 e-value: 2.2E-45 score: 154.8
None	No IPR available	PANTHER	PTHR10666:SF327		coord: 1..152
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 1..152
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 27..52
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 103..128
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 75..152
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..76

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig96	contig	F-serratus_M_contig96:329320..329781 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig96.20915.1	mRNA_F-serratus_M_contig96.20915.1	Fucus serratus male	mRNA	F-serratus_M_contig96 329209..330559 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig96.20915.1 ID=prot_F-serratus_M_contig96.20915.1|Name=mRNA_F-serratus_M_contig96.20915.1|organism=Fucus serratus male|type=polypeptide|length=154bp
MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQL
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID
GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
GGL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019956	Ubiquitin
IPR000626	Ubiquitin_dom
IPR019954	Ubiquitin_CS
IPR029071	Ubiquitin-like_domsf