prot_F-serratus_M_contig958.20906.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig958.20906.1
Unique Nameprot_F-serratus_M_contig958.20906.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length961
Homology
BLAST of mRNA_F-serratus_M_contig958.20906.1 vs. uniprot
Match: D8LRE2_ECTSI (DEAD domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE2_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 1.250e-73
Identity = 151/300 (50.33%), Postives = 197/300 (65.67%), Query Frame = 0
Query:    2 VSLPKALQGPLRAEK-EMTALQESVWSEGRGGADLLLEAPSGQETTVALSVFLLEQLVTALESAEATKPRRYSRASAIAAKLIPGAGGRDRIGSD----------------DDEK---------------KPKLHSLVLTRNREIAASLAQALVRLGK-EIPNLAVATLVGGVPVAENNKTLKGGCHIAVGTPGRVKFLIQKGTLLPESGKTLVLESADWLIAPVFMEDVGYVVGKFPEEKQVVATSTVGAS-SIEEGLCALLGVPELHRIGTDGSVRKSGVRMPSCSPPPRAPTTTTGV 267
            ++LP ALQ  L AE+ ++T LQ SVWSE R GADLL+EA SG ETT AL+V +L++LV A+ SAEA  PR Y+R    +     G  G +RI S                 D E                KP+L +LVLT+NRE+AA +   L+RLGK  +PNL +A+LVGG+ V+EN +TL  GCH+A+GTPGRVKFLI KG L+ ++G+ LVLESADWL+APVFMEDV YVV +FPEEKQVV +STV  S + EEGLC +LGVP L R+   G++ ++ VRMP    PP +PT ++ +
Sbjct:    1 MTLPPALQKSLEAEEVQVTPLQASVWSEARAGADLLIEAKSGPETTTALAVLVLDRLVAAISSAEAALPR-YARKRTSS---FSGLSGLNRIVSSVLRTTSSNNNGNSNVKDGESDLSTANGSSGSGGLLKPQLCALVLTKNREVAAGVKDTLLRLGKTSVPNLTIASLVGGIAVSENAQTLSAGCHVAIGTPGRVKFLIDKGVLVADTGRLLVLESADWLMAPVFMEDVDYVVRRFPEEKQVVLSSTVKPSVAFEEGLCEILGVPALKRLDPSGAIEEAQVRMPE---PPPSPTPSSAL 293          
BLAST of mRNA_F-serratus_M_contig958.20906.1 vs. uniprot
Match: A0A6H5KKW2_9PHAE (DEAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW2_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 7.570e-43
Identity = 90/150 (60.00%), Postives = 117/150 (78.00%), Query Frame = 0
Query:  120 QALVRLGKE-IPNLAVATLVGGVPVAENNKTLKGGCHIAVGTPGRVKFLIQKGTLLPESGKTLVLESADWLIAPVFMEDVGYVVGKFPEEKQVVATSTVGAS-SIEEGLCALLGVPELHRIGTDGSVRKSGVRMPSCSPPPRAPTTTTGV 267
            + L+RLGK  +PNL +A+LVGG+ VAEN +TL  GCH+A+GTPGRVKFLI KG L+P++G+ LVLESADWL+APVFMEDV YVV +FPEEKQVV +STV  S + EEGLC +LGVP L R+   G++ ++ VRMP    PP +PT ++ +
Sbjct:    2 ETLLRLGKSSVPNLTIASLVGGIAVAENARTLSAGCHVAIGTPGRVKFLIDKGVLVPDTGRLLVLESADWLMAPVFMEDVDYVVRRFPEEKQVVLSSTVKPSVAFEEGLCEILGVPALKRLDPSGAIGEAKVRMPE---PPPSPTPSSAL 148          
BLAST of mRNA_F-serratus_M_contig958.20906.1 vs. uniprot
Match: A0A6H5KMB9_9PHAE (DEAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB9_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 5.790e-33
Identity = 76/124 (61.29%), Postives = 95/124 (76.61%), Query Frame = 0
Query:  595 LLLRLGRGMQGLAVATLVGGVPVAENSKSLAGG-CHVAVGTPGRVRFLMSKGLLR-PWPARTLVLDSADWLMAPIFQEDVGWIASRFAKERQILAFSGAEPSAIQESLGNLVGSPRLISVGESS 716
            +L RLG G+  L+VATL+GGVPV+EN K+LAGG C+V VGTPGRV+FL+ +G LR    ARTLVLDSADWLMAP+F +DVGWIA  F K++Q+LAFSGA+P+  +  L  LV S  +  VG SS
Sbjct:    1 MLTRLGEGIPSLSVATLIGGVPVSENHKALAGGGCNVVVGTPGRVKFLIKEGTLRVSAAARTLVLDSADWLMAPVFHDDVGWIARNFPKDKQVLAFSGADPATYKAGLTALVDSSGMTPVGVSS 124          
BLAST of mRNA_F-serratus_M_contig958.20906.1 vs. uniprot
Match: D8LRE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE3_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.670e-29
Identity = 80/145 (55.17%), Postives = 96/145 (66.21%), Query Frame = 0
Query:  495 TASLEEL--DIPPVLLASLAAEGVTAPTPLQASVWTAGRGSHREDLLVHGRPGDETATAYSVPILECVLER--------C-----SPEATRRHG---------EVQLQALVLTRTRDMAANVSELLLRLGRGMQGLAVATLVGGV 615
            TASL E   +IP  LLASL A GVT PTPLQ SVW+ GRG+ REDLLVH RPGDETATAY VP+LE VLER        C     +P  +   G         + ++ ALVLTRTRDMA++V+ +L RLG G+  L+VATL+GGV
Sbjct:    7 TASLREAKRNIPAELLASLDANGVTLPTPLQESVWSIGRGAGREDLLVHARPGDETATAYCVPVLERVLERYPQPLCGDCEQAARAPAPSGGGGAACTGADREKYEVVALVLTRTRDMASDVTTMLTRLGEGIPSLSVATLIGGV 151          
BLAST of mRNA_F-serratus_M_contig958.20906.1 vs. uniprot
Match: N6YE77_9RHOO (DEAD/DEAH box helicase n=4 Tax=Thauera TaxID=33057 RepID=N6YE77_9RHOO)

HSP 1 Score: 119 bits (298), Expect = 1.520e-24
Identity = 75/211 (35.55%), Postives = 111/211 (52.61%), Query Frame = 0
Query:  486 PFVDSPAAGTASLEELDIPPVLLASLAAEGVTAPTPLQASVWTAGRGSHREDLLVHGRPGDETATAYSVPILECVLERCSPEATRRHGEVQLQALVLTRTRDMAANVSELLLRLGRGMQGLAVATLVGGVPVAENSKSLAGGCHVAVGTPGRVRFLMSKGLLRPWPARTLVLDSADWLMAPIFQEDVGWIASRFAKERQILAFSGAEPSAI 696
            P   +PAA     + L +PP +LA+L   G  + TP+QA+        H  DL+   + G     A+++P+L     R  P+       + +QALVL  TR++A  V++ + RL R    + V +L GG P+    +SLA G H+AVGTPGR+   + +G L+     TLVLD AD ++   F +D+ WIAS     RQ L FS   P+ I
Sbjct:   17 PPATTPAASARGFDALSLPPTMLANLQQLGYLSMTPIQAAALPPALDGH--DLIAQAKTGSGKTVAFALPLLN----RLDPQ------RLDVQALVLCPTRELADQVTQEIRRLARFADNIKVLSLCGGTPMRPQRESLAHGAHIAVGTPGRIMDHLERGSLKLEALSTLVLDEADRMLDMGFHDDIAWIASHCPVRRQTLLFSATFPAGI 215          
BLAST of mRNA_F-serratus_M_contig958.20906.1 vs. uniprot
Match: UPI00040D48F3 (ATP-dependent RNA helicase DbpA n=1 Tax=Azohydromonas australica TaxID=364039 RepID=UPI00040D48F3)

HSP 1 Score: 110 bits (275), Expect = 1.110e-21
Identity = 75/223 (33.63%), Postives = 116/223 (52.02%), Query Frame = 0
Query:  492 AAGTASLEELDIPPVLLASLAAEGVTAPTPLQASVWTAGRGSHREDLLVHGRPGDETATAYSVPILECVLERCSPEATRRHGEVQLQALVLTRTRDMAANVSELLLRLGRGMQGLAVATLVGGVPVAENSKSLAGGCHVAVGTPGRVRFLMSKGLLRPWPARTLVLDSADWLMAPIFQEDVGWIASRFAKERQILAFSGAEPSAIQESLGNLVGSPRLISVGE 714
            AA   S  +L + P LLA+L   G  + TP+QA+        H  DL+   R G     A+++P+L  +      +A R    +++QALVL  TR++A  V++ + RL R    +    L GG P+   ++SLA G HV VGTPGR+   + +G L+     TLVLD AD ++   F +D+  +A++  K+RQ L FS   P  I +     +  P+ + V E
Sbjct:    8 AAAGPSFGQLPLAPALLANLEQLGYLSMTPIQAAALPLALAGH--DLIAQARTGSGKTAAFALPLLTRL------DAAR----LEVQALVLCPTRELAEQVTQQIRRLARAEANVKALNLSGGSPIKPQAESLAYGAHVVVGTPGRLLDHLQRGTLKLDALSTLVLDEADRMLDMGFFDDIAAVAAQCPKQRQTLLFSATYPEGIAKLAQRFLREPKEVKVAE 218          
BLAST of mRNA_F-serratus_M_contig958.20906.1 vs. uniprot
Match: A0A3M6V3Y6_POCDA (RNA helicase n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6V3Y6_POCDA)

HSP 1 Score: 111 bits (277), Expect = 3.690e-21
Identity = 67/217 (30.88%), Postives = 108/217 (49.77%), Query Frame = 0
Query:  499 EELDIPPVLLASLAAEGVTAPTPLQASVWTAGRGSHREDLLVHGRPGDETATAYSVPILECVLERCSPEATRRHGEVQLQALVLTRTRDMAANVSELLLRLGRGMQGLAVATLVGGVPVAENSKSLAGGCHVAVGTPGRVRFLMSKGLLRPWPARTLVLDSADWLMAPIFQEDVGWIASRFAKERQILAFSGAEPSAIQESLGNLVGSPRLISVGES 715
            + L + P +L  L++ G   P+P+Q      GR     DL+   + G      +SV  LE V    S          + Q L+L  TR++A  + +++  +G  M+ L     +GG+PV E+ K+L   CH+AVGTPGRV++L+   LL+    R  +LD AD L+   FQE + W+ S     +Q++AFS   P  + + L   +  P  + +  S
Sbjct:   28 KSLLLSPDVLKGLSSSGFERPSPIQLKAIPLGRCGL--DLIAQAKSGTGKTCVFSVIALESVQLDSS----------KTQVLILAPTREIAVQIKDVITAIGSEMKNLVCHVFIGGLPVDEDKKALRKSCHIAVGTPGRVKYLIENHLLKTESVRLFILDEADKLLEDNFQEQINWVFSSLPSNKQMMAFSATYPEYLAKHLTRYMREPTFVRLNAS 232          
BLAST of mRNA_F-serratus_M_contig958.20906.1 vs. uniprot
Match: A0A522MC06_9BURK (ATP-dependent RNA helicase DbpA n=5 Tax=Burkholderiaceae TaxID=119060 RepID=A0A522MC06_9BURK)

HSP 1 Score: 108 bits (270), Expect = 4.310e-21
Identity = 72/208 (34.62%), Postives = 108/208 (51.92%), Query Frame = 0
Query:  501 LDIPPVLLASLAAEGVTAPTPLQASVWTAGRGSHREDLLVHGRPGDETATAYSVPILECVLERCSPEATRRHGEVQLQALVLTRTRDMAANVSELLLRLGRGMQGLAVATLVGGVPVAENSKSLAGGCHVAVGTPGRVRFLMSKGLLRPWPARTLVLDSADWLMAPIFQEDVGWIASRFAKERQILAFSGAEPSAIQESLGNLVGSPR 708
            L + P +LA+L   G TA TP+QA+        H  DL+   + G     A+S+ +L  +  R           VQ+QA+VL  TR++A  V++ + RL R  + + V TL GG P+A  + SL  G H+ VGTPGR+   + +G L      TLVLD AD ++   F +D+  + S+  KERQ L FS   P  I +     + +P+
Sbjct:   13 LALAPAMLANLDRLGYTAMTPIQAASLPVALAGH--DLIAQAKTGSGKTAAFSLALLTRLDVR----------RVQVQAMVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMAPQTASLEHGAHIVVGTPGRIMDHLERGNLALDALNTLVLDEADRMLDMGFYDDIATVVSQCPKERQTLLFSATYPEGIAKLSQRFLRNPK 208          
BLAST of mRNA_F-serratus_M_contig958.20906.1 vs. uniprot
Match: H5WNS4_9BURK (DNA/RNA helicase, superfamily II n=1 Tax=Burkholderiales bacterium JOSHI_001 TaxID=864051 RepID=H5WNS4_9BURK)

HSP 1 Score: 107 bits (268), Expect = 7.100e-21
Identity = 78/215 (36.28%), Postives = 111/215 (51.63%), Query Frame = 0
Query:  500 ELDIPPVLLASLAAEGVTAPTPLQASVWTAGRGSHREDLLVHGRPGDETATAYSVPILECVLE-RCSPEATRRHGEVQ-LQALVLTRTRDMAANVSELLLRLGRGMQGLAVATLVGGVPVAENSKSLAGGCHVAVGTPGRVRFLMSKGLLRPWPARTLVLDSADWLMAPIFQEDVGWIASRFAKERQILAFSGAEPSAIQESLGNLVGSPRLISV 712
            +L +   LL +L   G T PTP+QA+    G      DLLV  + G     A+ +P L+ +LE R  P   R  G+V   + LVL  TR++A  V++  +  GRG+QGL VA+LVGGVP     K+L G   + + TPGR+  LM  G       +TLVLD AD ++   F +D+ +IA     ERQ + FS      +      L   P+ I+V
Sbjct:   30 QLGLAKELLFALDKAGYTEPTPVQAAA--IGPALAGRDLLVSAQTGSGKTAAFVLPALQRILEARRDPAQRRPKGQVSGPRVLVLAPTRELAQQVTQAAVTYGRGVQGLRVASLVGGVPYHAQLKALRGPLDILIATPGRLMDLMGSGSAVLASVQTLVLDEADRMLDMGFIDDIHFIAQALPTERQTVMFSATFGGHVGNLARELTRDPQRIAV 242          
BLAST of mRNA_F-serratus_M_contig958.20906.1 vs. uniprot
Match: UPI0009E35F65 (probable ATP-dependent RNA helicase DDX20 isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E35F65)

HSP 1 Score: 109 bits (273), Expect = 1.010e-20
Identity = 68/212 (32.08%), Postives = 104/212 (49.06%), Query Frame = 0
Query:  499 EELDIPPVLLASLAAEGVTAPTPLQASVWTAGRGSHREDLLVHGRPGDETATAYSVPILECVLERCSPEATRRHGEVQLQALVLTRTRDMAANVSELLLRLGRGMQGLAVATLVGGVPVAENSKSLAGGCHVAVGTPGRVRFLMSKGLLRPWPARTLVLDSADWLMAPIFQEDVGWIASRFAKERQILAFSGAEPSAIQESLGNLVGSPRLI 710
            + L + P +L  L + G   P+P+Q      GR     DL+   + G      +SV  LE VL    PE+         Q L+L  TR++A  + +++  +G  M  +     +GG+PV EN K L   CH+AVGTPGRV++L+    L+    R  +LD AD L+   FQE + WI S     +Q++AFS   P  + + L   +  P  +
Sbjct:   28 KSLLLSPDVLKGLNSSGFERPSPIQLKAIPLGRCGL--DLIAQAKSGTGKTCVFSVIALESVL----PESNTT------QVLILAPTREIAVQIKDVISAIGSQMDNMVCQVFIGGLPVDENKKILKKPCHIAVGTPGRVKYLIENHFLKTESVRLFILDEADKLLEDNFQEQINWIFSSLPSNKQMMAFSATYPEYLAKHLTRYMREPTFV 227          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig958.20906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRE2_ECTSI1.250e-7350.33DEAD domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5KKW2_9PHAE7.570e-4360.00DEAD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KMB9_9PHAE5.790e-3361.29DEAD domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LRE3_ECTSI1.670e-2955.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
N6YE77_9RHOO1.520e-2435.55DEAD/DEAH box helicase n=4 Tax=Thauera TaxID=33057... [more]
UPI00040D48F31.110e-2133.63ATP-dependent RNA helicase DbpA n=1 Tax=Azohydromo... [more]
A0A3M6V3Y6_POCDA3.690e-2130.88RNA helicase n=1 Tax=Pocillopora damicornis TaxID=... [more]
A0A522MC06_9BURK4.310e-2134.62ATP-dependent RNA helicase DbpA n=5 Tax=Burkholder... [more]
H5WNS4_9BURK7.100e-2136.28DNA/RNA helicase, superfamily II n=1 Tax=Burkholde... [more]
UPI0009E35F651.010e-2032.08probable ATP-dependent RNA helicase DDX20 isoform ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 515..733
e-value: 1.5E-4
score: 31.1
coord: 14..250
e-value: 0.085
score: 2.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 529..710
score: 13.307
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 26..236
score: 9.88
NoneNo IPR availableGENE3D3.40.50.300coord: 456..713
e-value: 2.4E-33
score: 117.3
NoneNo IPR availablePANTHERPTHR24031:SF627ATP-DEPENDENT RNA HELICASE DBPAcoord: 501..714
coord: 17..210
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 501..714
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 17..210
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 520..691
e-value: 3.9E-13
score: 49.6
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 19..215
e-value: 4.3E-11
score: 42.9
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 496..524
score: 8.682
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..221
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 493..712

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig958contigF-serratus_M_contig958:272584..299779 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig958.20906.1mRNA_F-serratus_M_contig958.20906.1Fucus serratus malemRNAF-serratus_M_contig958 272499..302587 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig958.20906.1 ID=prot_F-serratus_M_contig958.20906.1|Name=mRNA_F-serratus_M_contig958.20906.1|organism=Fucus serratus male|type=polypeptide|length=961bp
MVSLPKALQGPLRAEKEMTALQESVWSEGRGGADLLLEAPSGQETTVALS
VFLLEQLVTALESAEATKPRRYSRASAIAAKLIPGAGGRDRIGSDDDEKK
PKLHSLVLTRNREIAASLAQALVRLGKEIPNLAVATLVGGVPVAENNKTL
KGGCHIAVGTPGRVKFLIQKGTLLPESGKTLVLESADWLIAPVFMEDVGY
VVGKFPEEKQVVATSTVGASSIEEGLCALLGVPELHRIGTDGSVRKSGVR
MPSCSPPPRAPTTTTGVSDRRLPSQGHVRAAGEAWASRGPGAPMTLSLSA
KERLLEETRNALKISTARAVASSSGGGKARSPSSVASDSRLAGTPKSSDR
APPPYSSVSSGIFSNCLSSKSNERVLSGAASRRSSAGGKVGLNAGACGCD
AGLLGAMGAQDDDCASTLDLLSPGALHGSERTRAVVVSGAVVNPVTAAVA
IRMDGSNKTLGLARVPEHREQRQHHDGQRDDGQHQPFVDSPAAGTASLEE
LDIPPVLLASLAAEGVTAPTPLQASVWTAGRGSHREDLLVHGRPGDETAT
AYSVPILECVLERCSPEATRRHGEVQLQALVLTRTRDMAANVSELLLRLG
RGMQGLAVATLVGGVPVAENSKSLAGGCHVAVGTPGRVRFLMSKGLLRPW
PARTLVLDSADWLMAPIFQEDVGWIASRFAKERQILAFSGAEPSAIQESL
GNLVGSPRLISVGESSVVVVAAAPTARTPLEQEEEMAGAAVATAEAEAVV
THDAGKIAYPADQQRSLGHGLGTTSSVVTTLAAFEGASAAPGVVLTLSPA
TSTVPPMRTIGEMRAESARRAQMVGVDRGGSQPQHSHQFHNAFGMMMSAT
TNATTAATVTGTVSAAARIKEAEGSYFSGGVHGSGGSGIYGSGNVSKGRK
ASVPSTSSTASVSSADSGVRARMRLSRENQLYGEWYGGVVHGRRRPPFGD
DAPSAWTRVS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase