prot_F-serratus_M_contig952.20892.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig952.20892.1
Unique Nameprot_F-serratus_M_contig952.20892.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length291
Homology
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A6M4GRU5_9PROT (Uncharacterized protein n=2 Tax=Usitatibacter rugosus TaxID=2732067 RepID=A0A6M4GRU5_9PROT)

HSP 1 Score: 62.4 bits (150), Expect = 5.410e-8
Identity = 43/150 (28.67%), Postives = 63/150 (42.00%), Query Frame = 0
Query:   76 WIET----LGARGVFAKTPLVDANGLPSLLRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDKDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRV 221
            WI T    L A   FA   L         + +   P +   H    G+   I   QL    RS+  +THR+LGRI++A  ++ G   + L       P       LL+ A+  ST   A  H R + F +HR WM+R  A+  +    R+
Sbjct:    7 WIMTSLALLVAAYAFALVALPSFRPELVQVHFQQRPLLVLAHFLGGGIAMAIGAFQLHAGLRSRFLSTHRWLGRIYIAAVLAGGTAGLVLAINSTAGPVAQWGFGLLAVAWLAST-FNAYRHIRDRNFEQHRAWMIRSYALTLAAVTLRI 155          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A2A4WXI7_9GAMM (Uncharacterized protein n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A4WXI7_9GAMM)

HSP 1 Score: 62.4 bits (150), Expect = 7.170e-8
Identity = 43/127 (33.86%), Postives = 62/127 (48.82%), Query Frame = 0
Query:  102 RYAD-HPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDKDRPHVNGAMVLLSAAYFLST-----ALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVL 222
            RY D    + F+H+  AG+  LI+P+Q       KNRT HRYLGR++    +   IG   +        H  G +V       L T      LLA+NHAR+   + HR WM+R  A+ Y+    R++
Sbjct:   53 RYLDMSQVLIFMHVVGAGVALLISPIQFM--IYRKNRTLHRYLGRLYFLAVIISSIGGYYMAW------HAFGGVVSTVGLATLCTLWWSFTLLAVNHARNGNIAAHRQWMIRSFALTYAAVTLRLM 171          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A0B5SHZ8_BACMY (Uncharacterized protein n=33 Tax=Bacillus TaxID=1386 RepID=A0A0B5SHZ8_BACMY)

HSP 1 Score: 62.0 bits (149), Expect = 9.270e-8
Identity = 48/185 (25.95%), Postives = 94/185 (50.81%), Query Frame = 0
Query:  109 MRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDKDRPHVNGAMV------LLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVRHTLPAGRISSKGSDI 287
            M FLHI  + +  +I P  LS +FR KN + HR +G+I++   + +  G +  + +     +  G +V      LLS  ++L++A  A+N  ++K+  +HR WM+R+ ++ ++    R+      W+ PL V       L G E     + V  + + +  ++  E+++R +L  G+   K +D+
Sbjct:   52 MLFLHIATSVVALVIGPFTLSTKFREKNISRHRMIGKIYM---IGVLFGCVSGLYLSF---YATGGLVGKLGFGLLSV-FWLTSAYQALNKVKNKKIQDHRNWMIRNYSLTFAAVTLRI------WL-PLFV------LLFGLEHFELSYAVIAWLAWVPNLIIAELFIRQSLNKGQ-QQKNADL 215          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A3B8IMD7_9BACT (Uncharacterized protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8IMD7_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 3.120e-7
Identity = 48/189 (25.40%), Postives = 81/189 (42.86%), Query Frame = 0
Query:   43 VAWCFFLVMTGSMVGQYVIFSSWAIGTFPFITRWIETLGARGVFAKTPLVDANGLPSLLRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDKDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSP 231
            + W   L+     +G+Y+I SSW      + T      GA  V    P           + AD     F H     L+ +I  LQ S++F+++ R  H+YLGR++V +++ +G+  I +               ++ A Y +   ++    A  K+F  HR WM R V IG+     R  +    ++SP
Sbjct:   95 IGWGLVLMGIFISLGKYIIPSSW------YTTIMTPLYGAEYVNDHMP-----------KSADRTLEDFSHRVVGVLYLVIGMLQFSKKFQTRFRKLHKYLGRVWVLVTIVLGLTGISIAIFVPFGGIGELIATVIFAGYMVFAVIMGWRTAIQKKFKLHRDWMFRAVMIGFGFSTIRFAFMAINFLSP 266          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: UPI001EF8A149 (DUF2306 domain-containing protein n=1 Tax=Cohnella sp. YIM B01951 TaxID=2911966 RepID=UPI001EF8A149)

HSP 1 Score: 58.9 bits (141), Expect = 1.030e-6
Identity = 42/151 (27.81%), Postives = 75/151 (49.67%), Query Frame = 0
Query:   77 IETLGARGVFAKTP--LVDANGLPSLLRYAD--HPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDK-DRPHVNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVL 222
            + T+GA  +FA  P  L+D      +++     H  +  +HIF + +  +I  +Q  +  R++N   HR +GRI++     + IG +  V +      ++     L  +A +L T    ++ A H+RF EHRVWM+R+ AI       R++
Sbjct:   16 VVTIGA-ALFAVAPYFLLDPAYSRVIIKTGSRMHFPLLLVHIFVSFIALVIGWIQFIDSLRARNPEVHRLIGRIYLGC---VAIGAVTGVIVGMYTTSYIRQIAFLTLSALWLFTGWKGLHSASHRRFDEHRVWMVRNYAITLVASTARLI 162          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A7W0CRD6_9ACTN (Uncharacterized protein n=1 Tax=Nonomuraea soli TaxID=1032476 RepID=A0A7W0CRD6_9ACTN)

HSP 1 Score: 59.3 bits (142), Expect = 1.110e-6
Identity = 53/209 (25.36%), Postives = 94/209 (44.98%), Query Frame = 0
Query:   71 PFITRWIETLGARGVFAKTPLVDANG----LPSLLRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDKDRPHVNGAMV--LLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVRH 273
            P++      + A   F+  P +  +     +P+   +  H  M  LH+    +  +   LQ+   FR+++   HR +GR++V   + +  GL+ LV +    P    AM   +L A  +L    +    ARH+RF+EHR WM+R  A+  S+   R LW     +S   VP Y+ +     E      G+  +   ++ ++A E W+  
Sbjct:   31 PWVAPLFVVVAAFLAFSLPPYLSLDATRSRVPAPEWFPPHFVMLSLHVIFGSIAMVSCCLQIWPWFRNRHPAAHRRIGRVYVFAGV-LPSGLMGLV-IGIATPFGPVAMASDVLLALLWLGYTFVGFRLARHRRFAEHRRWMVRSFALCMSIITNR-LWGVVTILSLSEVPRYAGNPAWLTEAAA---GMNTWLGWVLPLLAAEWWLER 233          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: UPI001E5C19D6 (DUF2306 domain-containing protein n=1 Tax=Pseudonocardia kujensis TaxID=1128675 RepID=UPI001E5C19D6)

HSP 1 Score: 58.2 bits (139), Expect = 2.730e-6
Identity = 57/212 (26.89%), Postives = 93/212 (43.87%), Query Frame = 0
Query:   76 WIETLGARGV-FAKTPLVDANGL-PSLLRYADHP------AMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIG----IGLIPLVQMDKDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIF----GVYLFASALICVVAMEIWV 271
            W+  LG   V F  T L    GL P+  R    P       M   HI    +  L + LQ+    R  +   HR+ GR+++   +  G    + + P  +M   +   N A+     A +L T +L    AR  R+++HR WM+R VA+ +S+   RV      W SPL +  Y+   L   +    +     GV ++AS ++ ++  E W+
Sbjct:   20 WVLPLGLLAVLFLVTALPPYLGLDPARSRVPPQPDLPHFYPMLVAHIAFGSVALLTSVLQVWPWLRRSHPRVHRWSGRLYLFAGVFPGGLAVLTVAPFGEMGPVQQAGNTAL----GALWLVTGVLGYRAARRGRYAQHRAWMVRSVALTWSIVANRV------W-SPLCLAVYAPGALSDADVAHSVIAQAIGVSVWASWVLNLIVAEWWL 220          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: UPI001CF670CF (DUF2306 domain-containing protein n=2 Tax=Pseudonocardia abyssalis TaxID=2792008 RepID=UPI001CF670CF)

HSP 1 Score: 57.0 bits (136), Expect = 5.620e-6
Identity = 54/196 (27.55%), Postives = 90/196 (45.92%), Query Frame = 0
Query:   80 LGARGVFAKTPLVDANGLPSLLRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMD-KDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVRHT 274
            LG     A+ PL D   LP       +PA+  LHI    +  L A +Q+  R R  +   HR  GR+++A  +  G+ ++ +        P    A  +L   + L TA+     AR  RF+ HR WMLR VA+ +S+   R  +++T  V        S   ++  E    + GV  + S ++ ++ +E W++ T
Sbjct:   30 LGLDPARARLPLPD---LPWF-----YPAL-VLHIACGSVALLTATVQVWPRLRRTHPVVHRTSGRVYLAAVLVGGVAVLGVAPFGLSGGPTAQVANTMLGLLWVL-TAVAGHRAARQPRFAAHREWMLRSVALTFSIVANR--FWSTVCVLVFAPSVTSGGPVDAAELAQAV-GVSTWLSWVVNLLVVEWWLQRT 212          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A2A4MLL8_9GAMM (Uncharacterized protein n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A4MLL8_9GAMM)

HSP 1 Score: 56.6 bits (135), Expect = 6.650e-6
Identity = 49/168 (29.17%), Postives = 76/168 (45.24%), Query Frame = 0
Query:   58 QYVIFSSWAIGTFPFITRWIETLGARGVFAKTPLVDANGLPSLL--RYADHPAMRF-LHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDKDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVL 222
             Y   S +A+GTF         +   G     PL+  N +P     RY     +   +H+   G+  LI+P+QL      KNRT HRYLGR++  + M   +G   +             + LLS  ++  T LLA+ +AR    + HR WM+R  A+ Y+    R++
Sbjct:   15 NYASLSLYALGTF-------LAVAVAGYGITFPLLLPN-MPDEFHQRYLSMSQLLISIHVVGGGIALLISPIQLM--IYRKNRTLHRYLGRVYFFVIMFASVGGYYMAWYAFGGIISTLGLGLLSTLWWCFT-LLAVIYARSGNIAAHRRWMIRSFALTYAAVTLRLM 171          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: UPI00141A37DB (DUF2306 domain-containing protein n=3 Tax=Bacillus cereus group TaxID=86661 RepID=UPI00141A37DB)

HSP 1 Score: 56.6 bits (135), Expect = 6.890e-6
Identity = 42/165 (25.45%), Postives = 81/165 (49.09%), Query Frame = 0
Query:  109 MRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDKDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVRH 273
            M F HI  + L  +I P  LS +FR KN + HR +GRI++   +  GI  + L               LLS  +++++A  A+N  ++K+  +H+ WM+R+ ++ ++    R+      W+ PL V       L G E+    + +  + + +  ++  E+++R 
Sbjct:   52 MLFSHITTSILALVIGPFTLSTKFREKNISRHRMVGRIYMVGILLGGISGLYLSFYAMGGLVAKLGFGLLSV-FWITSAYQALNRVKNKKIQDHQNWMIRNYSLTFAAVTLRI------WL-PLFV------LLFGLEQFELSYTIIAWLAWVPNLIIAELFIRQ 202          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6M4GRU5_9PROT5.410e-828.67Uncharacterized protein n=2 Tax=Usitatibacter rugo... [more]
A0A2A4WXI7_9GAMM7.170e-833.86Uncharacterized protein n=1 Tax=SAR86 cluster bact... [more]
A0A0B5SHZ8_BACMY9.270e-825.95Uncharacterized protein n=33 Tax=Bacillus TaxID=13... [more]
A0A3B8IMD7_9BACT3.120e-725.40Uncharacterized protein n=1 Tax=Cytophagales bacte... [more]
UPI001EF8A1491.030e-627.81DUF2306 domain-containing protein n=1 Tax=Cohnella... [more]
A0A7W0CRD6_9ACTN1.110e-625.36Uncharacterized protein n=1 Tax=Nonomuraea soli Ta... [more]
UPI001E5C19D62.730e-626.89DUF2306 domain-containing protein n=1 Tax=Pseudono... [more]
UPI001CF670CF5.620e-627.55DUF2306 domain-containing protein n=2 Tax=Pseudono... [more]
A0A2A4MLL8_9GAMM6.650e-629.17Uncharacterized protein n=1 Tax=SAR86 cluster bact... [more]
UPI00141A37DB6.890e-625.45DUF2306 domain-containing protein n=3 Tax=Bacillus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018750Protein of unknown function DUF2306, membranePFAMPF10067DUF2306coord: 111..241
e-value: 9.8E-15
score: 55.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 174..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 163..173
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 272..290
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 231..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 250..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..162
NoneNo IPR availableTMHMMTMhelixcoord: 142..164
NoneNo IPR availableTMHMMTMhelixcoord: 174..191
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 249..271
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 212..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig952contigF-serratus_M_contig952:291326..312193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig952.20892.1mRNA_F-serratus_M_contig952.20892.1Fucus serratus malemRNAF-serratus_M_contig952 289848..312253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig952.20892.1 ID=prot_F-serratus_M_contig952.20892.1|Name=mRNA_F-serratus_M_contig952.20892.1|organism=Fucus serratus male|type=polypeptide|length=291bp
MSTELAPNISTATTTSRSKKAPSTRRSTSLIKDVVDDARFRSVAWCFFLV
MTGSMVGQYVIFSSWAIGTFPFITRWIETLGARGVFAKTPLVDANGLPSL
LRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAM
SMSIGIGLIPLVQMDKDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFS
EHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTF
IFGVYLFASALICVVAMEIWVRHTLPAGRISSKGSDIKTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018750DUF2306_membrane