prot_F-serratus_M_contig952.20892.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig952.20892.1
Unique Nameprot_F-serratus_M_contig952.20892.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length291
Homology
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A6H5J9S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S6_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 7.780e-88
Identity = 129/262 (49.24%), Postives = 177/262 (67.56%), Query Frame = 0
Query:   30 LIKDVVDDARFRSVAWCFFLVMTGSMVGQYVIFSSWAIGTFPFITRWIETLGARGVFAKTPLVDANGLPSLLRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLV-----QMDKDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVRHTLPAGRISSKGSD 286
            L+  V++  RF +  W   ++++  MV   ++  +W IGTFP ITR IE  G +G +  TPL DA G PS L YA  PA RF+HI PAGLWS+IAPLQL+  FR+K+R  HR LGR+F+ MS+SI +GL+PLV               G   LL A YFL T LLA++HAR+KRF++HRVWMLRHVA+GYSVH++R+L + TWW+ PL++PGY+D T +G E R  +F +Y  A  ++ V  ME+W+RHTLP+G++   G +
Sbjct:   24 LMLGVLEHRRFSTAMWSMLMLLSFIMVVHNLVLQTWGIGTFPSITRRIEAQGEQGFYRSTPLFDAEGKPSFLAYARTPAGRFMHILPAGLWSVIAPLQLNPSFRAKHRAAHRRLGRLFIFMSVSISLGLVPLVLGVAPTTTATGDSRGGRGALLFAGYFLVTGLLAVHHARNKRFADHRVWMLRHVAMGYSVHMQRLLGHLTWWIFPLLMPGYTDLTNDGMELRARVFALYFVAGVVLTVGPMEVWLRHTLPSGKVLRAGQE 285          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: D7FX30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX30_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 7.920e-87
Identity = 133/259 (51.35%), Postives = 183/259 (70.66%), Query Frame = 0
Query:   30 LIKDVVDDARFRSVAWCFFLVMTGSMVGQYVIFSSWAIGTFPFITRWIETLGARGVFAKT-PLVDANGLPSLLRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDKDR-PH-VNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVRHTLPAGRISSKGS 285
            L+  V++  RF +  W   ++++  MV   ++F SW IGTFP ITR IE LG +G F+++ PL+DA G PS+L YA  PA R +HI PAGLWS+IAPLQLS  FR+K+RT HR LGR+F+ MS+SI +GL+PLV       P+  NG   L+ A YFL T LLA++HAR+KRF++HRVWMLRHVA+GYSVH++R+L + TWW+ PL++PGY+D T  G E R  +F  Y F    + V  ME+W+RHT P+G+  ++G+
Sbjct:   24 LMLGVLEHRRFSTAMWSMLMLLSFIMVVHNLVFRSWGIGTFPSITRRIEALGEQGTFSRSSPLIDAEGKPSILAYARTPAGRVMHILPAGLWSVIAPLQLSPSFRAKHRTAHRRLGRLFIFMSVSISLGLVPLVLSGAPTTPNWSNGRESLVFAGYFLVTGLLAVHHARNKRFADHRVWMLRHVAMGYSVHMQRLLGHLTWWMFPLLMPGYTDFTNGGKELRANVFISYFFVGLALTVGPMEVWLRHTSPSGKDVARGA 282          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: D7FX31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX31_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 4.480e-72
Identity = 114/238 (47.90%), Postives = 159/238 (66.81%), Query Frame = 0
Query:   45 WCFFLVMTGSMVGQYVIFSSWAIGTFPFITRWIETLGARGVFAKTPLVDANGLPSLLRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLV----QMDKDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPG-YSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVRHTLPA 277
            W  FL+++  MV   V+  SW IG+F  IT  +   G +G F  TPL DA G PS L YA  PA RF+HI PAGLWS+IAPLQL+  FR+K+RT HR LGR+F+ MS+S+ +G++P+V     + +    V+G +  L AAYFL+T +LA  HAR KRF++HR+W+LRHVA+GY+ H++R+L   +WW  PL+ P  Y++ + EG   R  +FG Y   S ++CV  ME+W+RHT  A
Sbjct:    9 WSLFLLLSCIMVFHNVVLRSWGIGSFASITTQVVRQGEQGFFRSTPLYDAEGKPSFLAYARTPAGRFMHILPAGLWSVIAPLQLNPSFRAKHRTAHRRLGRLFIFMSVSMALGVVPIVLSGASLIRRSVAVDGGLFTL-AAYFLATGVLAATHARSKRFADHRIWILRHVAMGYAAHVQRLLAALSWWAIPLVAPAKYTELSPEGALLRGDVFGGYFLVSIVLCVGLMEMWLRHTTTA 245          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A835ZIV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIV7_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.760e-23
Identity = 73/240 (30.42%), Postives = 117/240 (48.75%), Query Frame = 0
Query:   39 RFRSVAWCFFLVMTGSMVGQYVIFSSWAIGTFPFITRWIETLGARGVFAKTPLVDANGLPSLLRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDKDRPHVNGA--MVLLSA--AYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVRHT 274
            R     + F + M+  MV +  +  ++A+GTF      +  +   G F    L +A+G    L+Y + P  R  H+ P  +W+++ P+Q S   R + R  HR  GR+F+A S  I IGL  +++ ++   +  G   +V LS   A+F+ +    +  AR      HRVWMLRH A GY V L+R++   T      ++ G  D T+    K  F   V    +A I V A+E+W+  T
Sbjct:   17 RIAKAGFLFTIFMSIVMVAEIAVLRNFAVGTFQSQEDRLVRMYKEGRFFTKVLREADGSAFGLKYKNFPVARLCHMLPGLVWAILGPIQFSAIIRRRYRRVHRVSGRVFMACSALIAIGLCSIIR-NRLTFYTAGFWDLVFLSVMNAWFVFSGARGVALARRGDIRGHRVWMLRHCASGYFVFLQRIIMLLT---RGALMRGGFDLTVSINAKAWF--HVCALIAAAISVTAIEVWLAVT 250          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A6H5JCE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE1_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.380e-21
Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 0
Query:  112 LHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDKDRPHVN---------------GAMVLLSAAYFLSTALLAINHARHKRFSEHR 203
            +HI PAGLWS+IAP QLS  FR+K+RT HR LGR+F+ MS+SI +GL+PLV         +               G   L+ + YFL T LLA++HAR+K F++HR
Sbjct:    1 MHILPAGLWSVIAPQQLSPSFRAKHRTAHRRLGRLFILMSVSIALGLVPLVLSVAPTTPASKTTLGPSALIVDWSDGRESLVFSGYFLVTGLLAVHHARNKGFADHR 107          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A812M3D9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812M3D9_9DINO)

HSP 1 Score: 97.4 bits (241), Expect = 2.470e-19
Identity = 69/243 (28.40%), Postives = 113/243 (46.50%), Query Frame = 0
Query:   51 MTGSMVGQYVIF-SSWAIGTFPFITRWIETLGARGVFAKTPLVDANGLPSLLRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLI-----PLVQMDKD----RPHVNGAMVLLS-----------AAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVR 272
            ++  MVG  ++F  SW  G +     WIE       F K   V       + +Y  HP+++  HI PA  W+L+ P+Q+    R + R  HR+LGR+FVA+S+++  GL+      LV +  D     PH + + + L              YFL + LLA+  AR K F+ H+ W+ RH+  G  V ++R+      +V  +M    +       +K  F  G  L   A + +V  E+ ++
Sbjct:  183 LSAMMVGWVLVFPGSWMGGRWKLHDDWIEES-----FDKYAAVFPTPKSLITKYQHHPSVQLTHILPAAFWALLVPIQIHPDVRRRYRRAHRWLGRLFVALSLAVFAGLLIIDARGLVFILSDFPTIEPHAHMSKIGLQWLDHMALFRGIGLYFLLSILLAVQRARAKDFAGHQRWIFRHIGSGLWVAVQRI------YVGVMMTEANTPED----QKANFADGATL--GAALTIVTAEVAIQ 408          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A2N3YGG0_9MICO (Putative membrane protein DUF2306 n=1 Tax=Phycicoccus duodecadis TaxID=173053 RepID=A0A2N3YGG0_9MICO)

HSP 1 Score: 75.1 bits (183), Expect = 2.500e-12
Identity = 56/205 (27.32%), Postives = 95/205 (46.34%), Query Frame = 0
Query:   73 ITRWIETLGARGVFAKTPLVDANGLPS---LLRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGIGLIPLVQMDKDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVRHT 274
            +T  +    AR V    P + A  +P     + Y  HP + + H+ P  ++ L APLQLS+RFR+++   HR LGR  +A ++  G   + L  +            L+  ++F+   +LA    R  R ++HR WM+R  A+   +   R+ W   +    + + G  D T     + TF  G+  +    + V+A E W+R T
Sbjct:   25 LTAVVLVFFARRVVGDGPHILAGTVPDDDLSVLYVAHPWLAYGHMVPGVVYLLGAPLQLSQRFRTRHYGVHRRLGRALLACALLSGTLAVVLGFVFAWGGSAETLATLVFGSWFVGCLVLAFRAVRTGRVADHRRWMVRAFAVSIGIATIRI-WVGIFTGVQIGLLGMGDATFP--LRATF--GIAFWLGLSMHVLAGEWWLRRT 224          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A349X416_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349X416_9GAMM)

HSP 1 Score: 73.9 bits (180), Expect = 5.520e-12
Identity = 49/178 (27.53%), Postives = 85/178 (47.75%), Query Frame = 0
Query:  102 RYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMSMSIGI-GLIPLVQMDKDRPHVNGAMVLLSAAYFLSTALLAINH----ARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVRHT 274
            RY  HP + F+H+    L+ L APLQ S +FR+KN T HR++GR+ +   +  G+ G++  + +    P   G   +L+  +F    ++        AR++    HR W++R  AIG  V  +R+L +            +    L  +++   IFG  L+    I ++  E W+  T
Sbjct:   56 RYYRHPLVSFIHMGTGILFLLFAPLQFSTKFRAKNLTLHRWIGRVLMTAGLVAGVTGILAGLWL----PAFGGISTMLAVWFFGIAIIICFLRSFWCARNRMIPAHREWIMRAFAIGLGVGTQRILIFI-----------FMPFQLAPFDQ---IFGPLLWLGIAINLLVAETWINVT 215          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A432ZZQ3_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A432ZZQ3_9FUNG)

HSP 1 Score: 71.2 bits (173), Expect = 2.500e-11
Identity = 50/180 (27.78%), Postives = 88/180 (48.89%), Query Frame = 0
Query:  112 LHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAMS-MSIGIGLI-------------PLVQMDKDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFSEHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIFGVYLFASALICVVAMEIWVRHTLPA 277
            ++  P  LW++  PLQLS   R    + HR +G I + +S + I I  +             P+  +     + N   VL  AA+FL   +     AR KRF +HR WM+R+ A GYSV ++R+++     +   +V G++    E +++  F + + +  +  + V  + +WV H+ PA
Sbjct:    1 MYFIPVYLWAIAMPLQLSTTIRKSAPSWHRKIGTITLGISGLLISISGVFFHVAGIAYQTHDPVGSLAWIFSNRNTTTVL--AAWFLYVTIKGYLAARAKRFDQHRRWMVRYAAAGYSVVVQRIIF-----IIVALVYGFNTEAEERFKRNLFGYLLSIGVALSVVVAELGLWV-HSRPA 172          
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Match: A0A6H5JEP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP7_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 6.500e-11
Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 0
Query:  206 MLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTFIF 252
            MLRHVA+GYSVH++R+L + TWW+ PL++PGY+D T +G E R  +F
Sbjct:    1 MLRHVAMGYSVHMQRLLGHLTWWIFPLLMPGYTDLTKDGKELRANVF 47          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig952.20892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9S6_9PHAE7.780e-8849.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX30_ECTSI7.920e-8751.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FX31_ECTSI4.480e-7247.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZIV7_9STRA2.760e-2330.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JCE1_9PHAE1.380e-2146.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A812M3D9_9DINO2.470e-1928.40Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A2N3YGG0_9MICO2.500e-1227.32Putative membrane protein DUF2306 n=1 Tax=Phycicoc... [more]
A0A349X416_9GAMM5.520e-1227.53Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A432ZZQ3_9FUNG2.500e-1127.78Uncharacterized protein n=1 Tax=Jimgerdemannia fla... [more]
A0A6H5JEP7_9PHAE6.500e-1157.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018750Protein of unknown function DUF2306, membranePFAMPF10067DUF2306coord: 111..241
e-value: 9.8E-15
score: 55.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 174..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 163..173
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 272..290
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 231..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 250..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..162
NoneNo IPR availableTMHMMTMhelixcoord: 142..164
NoneNo IPR availableTMHMMTMhelixcoord: 174..191
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 249..271
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 212..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig952contigF-serratus_M_contig952:291326..312193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig952.20892.1mRNA_F-serratus_M_contig952.20892.1Fucus serratus malemRNAF-serratus_M_contig952 289848..312253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig952.20892.1 ID=prot_F-serratus_M_contig952.20892.1|Name=mRNA_F-serratus_M_contig952.20892.1|organism=Fucus serratus male|type=polypeptide|length=291bp
MSTELAPNISTATTTSRSKKAPSTRRSTSLIKDVVDDARFRSVAWCFFLV
MTGSMVGQYVIFSSWAIGTFPFITRWIETLGARGVFAKTPLVDANGLPSL
LRYADHPAMRFLHIFPAGLWSLIAPLQLSERFRSKNRTTHRYLGRIFVAM
SMSIGIGLIPLVQMDKDRPHVNGAMVLLSAAYFLSTALLAINHARHKRFS
EHRVWMLRHVAIGYSVHLKRVLWYTTWWVSPLMVPGYSDHTLEGYEKRTF
IFGVYLFASALICVVAMEIWVRHTLPAGRISSKGSDIKTG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018750DUF2306_membrane