prot_F-serratus_M_contig950.20877.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig950.20877.1
Unique Name	prot_F-serratus_M_contig950.20877.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	263

Homology

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BLAST of mRNA_F-serratus_M_contig950.20877.1 vs. uniprot
Match: A0A6H5KHJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ1_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 8.780e-39
Identity = 107/261 (41.00%), Postives = 147/261 (56.32%), Query Frame = 0

Query:    5 APAVSTTVLTFVLVIGWRLGEPFRVQTPFLLTQGSGASCRKTLKCGSASSHQLPRQ-RRGTTSTTSISAGNKSSGNGIDKSYSDSGGIEDTARPARPVATAAANGTSKDRDAEA-ERLRQEVFANEKGFLESQAFNPRRAKEKEEEEEVRRMAAQWGSTPEKAREVLTKTSSKEDLSFQALESIAEDLNLVDEQQRDFMMKAGIKKLAEATTLPKXXXXXXXXXXXHRDPVGEAVTDRIFAAESGFVQNSEEFKNKLKAGS 263
            AP+      TF   IG R G+ F  Q+P   ++    +   +      ++    RQ  +     T++ A     G G      D+G     +    P  TAA        DAEA E LR++VFANEKGF  S  FNP RA+E+ EEEE R +AAQWGSTPE+A+E+++KT   +DLSFQ L+ I E+LN+ DEQQR FM++A +KKL+ A+ LPK             D V E + +R+FA+E GF+QNS +FKNK+K GS
Sbjct:    2 APSAPKIAWTFTFAIGSRSGDSFNFQSPCSSSRWPSRTASHSYPAAPHNNRCCSRQPAQAAAKITAVLAARHQGGVG------DAGDENRNSHGDLPGRTAADTA-----DAEAAEALRRQVFANEKGFEASSVFNPTRAREEREEEEARALAAQWGSTPERAKEIVSKTIDDKDLSFQELQRITEELNMSDEQQRAFMLQASMKKLSAASRLPKRPPP---------DRVKEVLNERVFASEKGFLQNSADFKNKMKVGS 242

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BLAST of mRNA_F-serratus_M_contig950.20877.1 vs. uniprot
Match: D7FVK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK9_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 3.120e-8
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 0

Query:  194 DEQQRDFMMKAGIKKLAEATTLPKXXXXXXXXXXXHRDPVGEAVTDRIFAAESGFVQNSEEFKNKLKAGS 263
            DEQQR FM++A +KKL+ A+ LPK             D V E + +R+FA+E GF+QNS +FKNK+K GS
Sbjct:    3 DEQQRAFMLQASMKKLSAASRLPKRPPP---------DRVKEVLNERVFASEKGFLQNSADFKNKMKVGS 63

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig950.20877.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig950.20877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KHJ1_9PHAE	8.780e-39	41.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FVK9_ECTSI	3.120e-8	48.57	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..263
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..19
None	No IPR available	TMHMM	TMhelix		coord: 7..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig950	contig	F-serratus_M_contig950:297534..305859 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig950.20877.1	mRNA_F-serratus_M_contig950.20877.1	Fucus serratus male	mRNA	F-serratus_M_contig950 297534..305884 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig950.20877.1 ID=prot_F-serratus_M_contig950.20877.1|Name=mRNA_F-serratus_M_contig950.20877.1|organism=Fucus serratus male|type=polypeptide|length=263bp
MTSTAPAVSTTVLTFVLVIGWRLGEPFRVQTPFLLTQGSGASCRKTLKCG
SASSHQLPRQRRGTTSTTSISAGNKSSGNGIDKSYSDSGGIEDTARPARP
VATAAANGTSKDRDAEAERLRQEVFANEKGFLESQAFNPRRAKEKEEEEE
VRRMAAQWGSTPEKAREVLTKTSSKEDLSFQALESIAEDLNLVDEQQRDF
MMKAGIKKLAEATTLPKRRRQQQQQQQQHRDPVGEAVTDRIFAAESGFVQ
NSEEFKNKLKAGS