prot_F-serratus_M_contig95.20862.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig95.20862.1
Unique Nameprot_F-serratus_M_contig95.20862.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length278
Homology
BLAST of mRNA_F-serratus_M_contig95.20862.1 vs. uniprot
Match: D8LI95_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI95_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 5.920e-130
Identity = 195/282 (69.15%), Postives = 216/282 (76.60%), Query Frame = 0
Query:    3 RGSIGPIAELSHDLLTNCMLWLNMHELGLSAAVCSIWRVAAEEDGVWRFWWSRRFREDPPRSQGRKGYGQLKRLHRYRFDDPQVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVDGYRYQIHYPGWDSNWDEWVSRDRLRWPVDPSYLSTIFMVRDKIEVWCTGTHVKGAWLQARVRQQIKDDRVSLKNVLATSPRTVWVPRENCRLVAVGA--VPAVSR------GRGRFGKMDASRQEGLTRTLRSLSVGARN-PLAGIAGFRAAVRRRVSVLRMR 275
            R + G +A L  +LL   M  LNM +LG    V   WR AAEED VWRFWW+RRFREDPP  +GR   G LK+LHRYR +DP VGDK+EVSWEGRFRLESLDVFVGRSWWEATVVQK+DG++Y+IHYPGWDSNWDEWV RDRLRWPVDPSYLST F VR+ +EVWCTGTHVKGAWLQARVRQ IK D+VSLKNVLA+SPRTVWVPR   R V  GA  V + SR      G GR  K+DASRQE L R LR LS GAR  P AG+AG R AVRRR S+ RMR
Sbjct:   20 RRATGQLAGLPRELLARSMELLNMVDLGQVCCVNKDWRNAAEEDAVWRFWWARRFREDPPPQRGRARAGHLKQLHRYRLEDPLVGDKVEVSWEGRFRLESLDVFVGRSWWEATVVQKMDGFKYKIHYPGWDSNWDEWVVRDRLRWPVDPSYLSTTFRVREVVEVWCTGTHVKGAWLQARVRQ-IKQDQVSLKNVLASSPRTVWVPRSKVRRVCTGASCVNSSSRNGXXXXGGGRSSKLDASRQEALARALRGLSAGARRLPRAGLAGLRGAVRRRASLSRMR 300          
BLAST of mRNA_F-serratus_M_contig95.20862.1 vs. uniprot
Match: W7T606_9STRA (F-box domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T606_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.080e-47
Identity = 89/218 (40.83%), Postives = 133/218 (61.01%), Query Frame = 0
Query:   23 WLNMHELGLSAAVCSIWRVAAEEDGVWRFWWSRRFREDPPRSQGRKGYG---QLKRLHRYRFDDPQVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVD-GYRYQIHYPGWDSNWDEWVSRDRLRWPVDPSYLSTIFMVRDKIEVWCTGTHVKGAWLQARVRQQIKDDRVSLKNVLATSPRTVWVPRENCRLVAVGAVPAVSR-GRGRFGKMDAS 235
            ++++ ELG++A+VC  W+   +   VW+  + +RF           G G     + L R R  DP VGD +EV+W+G+FRLES+D++ G +WW A VV+K + G RY+IHYPGWDS WDEWV+RDRLRW V+   L+   M  D +E+WC G++V GAWL+A+VR+ +K     +  VL++    +WV RE  R+   G   ++ + G   F   DA+
Sbjct:  208 FMSISELGMAASVCQQWKETVQSVAVWKPLYIKRFHFLHSPDDASTGIGLPLSYQALFRARLLDPHVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVARDRLRWTVEQD-LNKRIMPNDDVEIWCCGSNVPGAWLEAKVRK-VKGQTYCVGRVLSSG--ALWVNRERVRISPKGGARSLGKQGASNFFSRDAA 421          
BLAST of mRNA_F-serratus_M_contig95.20862.1 vs. uniprot
Match: A0A4D9D060_9STRA (F-box domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D060_9STRA)

HSP 1 Score: 162 bits (411), Expect = 5.210e-45
Identity = 79/181 (43.65%), Postives = 115/181 (63.54%), Query Frame = 0
Query:   23 WLNMHELGLSAAVCSIWRVAAEEDGVWRFWWSRRFREDPPRSQGRKGYG---QLKRLHRYRFDDPQVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVD-GYRYQIHYPGWDSNWDEWVSRDRLRWPVDPSYLSTIFMVRDKIEVWCTGTHVKGAWLQARVRQQIKDDRVSLKNVLAT 199
            ++++ ELG++A+VC  W+   +   VW+  + +RF           G G       L R R  DP VGD +EV+W+G+FRLES+D++ G +WW A VV+K + G RY+IHYPGWDS WDEWV RDRLRW V+   L+   M  D +E+WC G++V GAWL+A+VR+ +K     +  VL++
Sbjct:   86 FMSISELGMAASVCQQWKETVQSGAVWKPLYIKRFHFLHSPDDASTGIGLPVSYHALFRARLLDPYVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVPRDRLRWTVEQD-LNKRIMPNDDVEIWCCGSNVPGAWLEAKVRK-VKGQTYCVGRVLSS 264          
BLAST of mRNA_F-serratus_M_contig95.20862.1 vs. uniprot
Match: A0A835ZI68_9STRA (Tudor-knot domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI68_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.960e-42
Identity = 90/211 (42.65%), Postives = 115/211 (54.50%), Query Frame = 0
Query:   21 MLWLNMHELGLSAAVCSIWRVAAEEDGVWRFWWSRRFRED-------------PPRSQGRKGYGQLKRLHRYRFDDPQVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVDGYR-YQIHYPGWDSNWDEWVSRDRLRWPVDPS---YLSTIFMVRDKIEVWCTGTHVKGAWLQARVRQQIKDDRVSLKNVLATSPRTVWVPRENCRLV 214
            M +L++ ELG  A +   WR  +E D +WR  +  RF+               PP S         K     R   PQVGD++EV+W G+FRLESL+VF G +WW A VV + D  R Y++HYPGW+  WDEWVSR+RLRW  D      L     V D +EVWC G HV GAWL+ RV   I+ DR  L ++LA    T  +P   CRLV
Sbjct:    1 MHFLSLPELGTLARLSKSWRQLSEHDYLWREPYKARFKISDSLLAAGSDAAVTPPLS--------CKEAFARRLLHPQVGDRVEVAWRGKFRLESLEVFSGLAWWLADVVARSDDCRRYKVHYPGWEPRWDEWVSRERLRWGNDARAARLLGHPVEVGDTVEVWCGGVHVPGAWLEGRV-SCIRSDRAYLGDMLAAG--TFSIPLARCRLV 200          
BLAST of mRNA_F-serratus_M_contig95.20862.1 vs. uniprot
Match: A0A835ZFT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT0_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.470e-40
Identity = 94/236 (39.83%), Postives = 131/236 (55.51%), Query Frame = 0
Query:    8 PIAELSHDLLTNCMLWLNMHELGLSAAVCSI---WRVAAEEDGVWRFWWSRRFREDPPR--------SQGRKGYG-QLKRLHRYRFDDPQVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQ-KVDGYRYQIHYPGWDSNWDEWVSRDRLRWPVD---PSYLSTIFMVRDKIEVWCTGTHVKGAWLQARVRQQIKDDRVSLKNVLATSPRTVWVPRENCRLVAVGA-VPAVSRGR 226
            P A L   L  +   +L + E G   AVC +   WR   E + +WR  +  RF+   P+        +Q     G ++K L   R   PQVGD++EV+W G+FRLESL+++ G +WW A +V+   DG RY++HYPGW++ WDE+V R+RLRW  D            V D +E+WC GT+V GAWL+ RV   I+ +RV L +V+A       V  E CRLV+ GA  P  S GR
Sbjct:   28 PAASLPPGLFLDIAQFLTLEERG--KAVCCVSRKWRQLGEHNHLWREPYLTRFKFHSPQEDLATHTEAQELAQPGPKVKDLFARRLVRPQVGDRVEVAWRGKFRLESLEIYNGLAWWLAEIVECDADGQRYKVHYPGWEARWDEFVPRERLRWGNDRRAAQLRDERIAVGDMVEIWCGGTNVPGAWLEGRV-SSIRGERVFLGDVVAEG--FFSVTEERCRLVSKGASAPPQSEGR 258          
BLAST of mRNA_F-serratus_M_contig95.20862.1 vs. uniprot
Match: A0A7S4A403_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A403_9STRA)

HSP 1 Score: 145 bits (366), Expect = 9.550e-38
Identity = 80/221 (36.20%), Postives = 116/221 (52.49%), Query Frame = 0
Query:   12 LSHDLLTNCMLWLNMHELGLSAAVCSIWRVAAEEDGVWRFWWSRRFREDPPRSQGRKG---YGQLKRLHRYRFDDPQVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVD----------GYR-------YQIHYPGWDSNWDEWVSRDRLRWPVDPSYLSTIFMVRDKIEVWCTGTHVKGAWLQARVRQQIKDDRVSLKNVLATSPRTVWVPRENCR 212
            L  D +  C+ +L++      + V   W   + ED +WR  +  RF        G      Y   K+ ++ R +DP VGD +EV+W G+FRLESL+++ G +WW A VV KV           G +       Y++ +PGW+  WDEWVSRDRLRW    +  +     RD +EVWC   +V GAWL+A V Q+I+ D V +  VL+T   ++WV R   R
Sbjct:   97 LPRDTMLLCLSFLDVTAHTTLSTVSRDWLSLSSEDALWRDHYLNRFSGGSDEGDGETSADEYEDYKQEYKQRLEDPHVGDDVEVAWRGKFRLESLEIYRGTAWWVAVVVDKVALDAASGSPGRGRKIHAAKAWYKVTFPGWEGRWDEWVSRDRLRWRAKNTQEADALKPRDFVEVWCGSQNVPGAWLEASV-QKIRGDAVEVGRVLSTG--SLWVDRSRVR 314          
BLAST of mRNA_F-serratus_M_contig95.20862.1 vs. uniprot
Match: A0A8J2SC81_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SC81_9STRA)

HSP 1 Score: 143 bits (361), Expect = 4.540e-37
Identity = 85/224 (37.95%), Postives = 124/224 (55.36%), Query Frame = 0
Query:    9 IAELSHDLLTNCMLW-LNMHELGLSAAVCSIWRVAAEEDGVWRFWWSRRFREDPPRSQGRKGYGQLKRLHRYRFDDPQVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVDGY-----------------RYQIHYPGWDSNWDEWVSRDRLRWPVDPSYLSTIFMVRDKIEVWCTGTHVKGAWLQARVRQQIKDDRVSLKNVLATSPRTVWVPRENCRLV 214
            +A L  +LL + +L  L++  L   AAV    R AA  D  WR  ++RRF      S+       L+   R R  DP  GD++E++W GRFRLE L+V+ G +WW A VV+K D                   +Y++HY  WD+ WDEWV+RD+LRWPV P   + +    D +EVWC+G+ V GAWL+A V   ++ +   + +V A+S R +WV R+  RL+
Sbjct:   83 LAGLPRELLEDAVLANLDVKNLAAMAAVSRAARRAASSDAAWRPQYARRFGAADDASEHFDFGASLRESFRQRLGDPAPGDRVEIAWRGRFRLEGLEVYRGLAWWAAEVVEKRDAXXXXXXAPDCPLDDRRARKYKVHYVHWDARWDEWVARDQLRWPV-PEGRTGVVASGDDVEVWCSGSAVPGAWLRAVVTA-VEGELYCVGDV-ASSGR-LWVRRDRVRLI 302          
BLAST of mRNA_F-serratus_M_contig95.20862.1 vs. uniprot
Match: A0A7S3K1B0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1B0_9STRA)

HSP 1 Score: 116 bits (290), Expect = 6.540e-26
Identity = 79/259 (30.50%), Postives = 112/259 (43.24%), Query Frame = 0
Query:   28 ELGLSAAVCSIWRVAAEEDGVWRFWWSRRFREDPPRSQGRKGYG-QLKRLHRYRFDDPQVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQK----------------------VDGY-------------------------------------------------RYQIHYPGWDSNWDEWVSRDRLRWPVDPSYLSTIFMVRDKIEVWCTGTHVKGAWLQARVRQQIKDDRVSLKNVLATSPRTVWVPRENCRLV 214
            +L   A+V   ++  A+ D  W+  + R F     ++     YG  LK  +  R  DP  GD++EV+W+GRFRLE L+V+ G +WW A V +K                      +D                                                   RY++HY  WDS WDEWVSR++LRWPV      TI  + D +EVWC+G  V GAWL+A V   + DD   + NV ++    +WV R+  RLV
Sbjct:  156 QLAHLASVSRGFKQLADSDASWQATYDRAFGNS--KAGVTYDYGASLKESYHQRIRDPSTGDRVEVAWQGRFRLEGLEVYRGLAWWAAEVAEKRPNDIASNEEDMIPPEQFPPQHIDNQVVPHEQNHEVDLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNTSKRYRVHYLNWDSRWDEWVSREQLRWPVQEGKNCTI-EIGDDVEVWCSGNTVPGAWLRAVV-DAVDDDLFCVGNVASSGH--LWVSRDRVRLV 408          
BLAST of mRNA_F-serratus_M_contig95.20862.1 vs. uniprot
Match: A0A7S2XXB7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXB7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 8.950e-22
Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = 0
Query:  125 YQIHYPGWDSNWDEWVSRDRLRWPVDPSYLSTIFMVRDKIEVWCTGTHVKGAWLQARVRQQIKDDRVSLKNVLATSPRTVWVPRENCRLVAVGAVPA 221
            Y+IHYPGWD+ WDEWV R+RLRW +  + +   F V D++EVWCTG++V GAWL+A+V+  IK +++ +  +L++ P  +WV +   RL      PA
Sbjct:    1 YKIHYPGWDTRWDEWVPRNRLRWAMHHNPMEN-FQVNDRVEVWCTGSNVPGAWLEAQVKA-IKGEQIFVGKMLSSGP--LWVAKTRVRLCPKPKEPA 93          
BLAST of mRNA_F-serratus_M_contig95.20862.1 vs. uniprot
Match: A0A7S3Z4G2_9EUKA (Hypothetical protein n=4 Tax=Lotharella TaxID=74819 RepID=A0A7S3Z4G2_9EUKA)

HSP 1 Score: 101 bits (251), Expect = 2.070e-21
Identity = 54/154 (35.06%), Postives = 84/154 (54.55%), Query Frame = 0
Query:   80 RFDDPQVGDKIEVSWEGRFRLESLDV-----FVGRSWWEATVV-----------QKVDGYRYQIHYPGWDSNWDEWVSRDRLRWPVDPSYLSTIFM-VRDKIEVWCTGTHVKGAWLQARVRQQIKD-DRVSLKNVLATS-PRTVWVPRENCRLV 214
            R   P+VGD +EV W+G+F   +L       F G++WW+A+VV           Q  + + Y+ H+PGW+S WDEW++R ++RWP    Y + + + V D +EV    T V   W++  V++   D D V L  V     PR +WV R++ RL+
Sbjct:  116 RVSSPRVGDCVEVLWQGKFYSHTLGEHGTMGFEGKAWWQASVVAREPESGENGQQSDNQFYYRAHFPGWESKWDEWITRGQIRWPKPMDYQAELEIDVGDHVEVLLESTRVPSVWMEGDVKKVTIDIDGVELFLVGGMKRPRHIWVRRDSIRLL 269          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig95.20862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LI95_ECTSI5.920e-13069.15F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
W7T606_9STRA1.080e-4740.83F-box domain-containing protein n=1 Tax=Nannochlor... [more]
A0A4D9D060_9STRA5.210e-4543.65F-box domain-containing protein n=1 Tax=Nannochlor... [more]
A0A835ZI68_9STRA2.960e-4242.65Tudor-knot domain-containing protein n=1 Tax=Tribo... [more]
A0A835ZFT0_9STRA1.470e-4039.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4A403_9STRA9.550e-3836.20Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A8J2SC81_9STRA4.540e-3737.95Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3K1B0_9STRA6.540e-2630.50Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2XXB7_9STRA8.950e-2245.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3Z4G2_9EUKA2.070e-2135.06Hypothetical protein n=4 Tax=Lotharella TaxID=7481... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 81..153
e-value: 6.2E-12
score: 47.1
IPR025995RNA binding activity-knot of a chromodomainPFAMPF11717Tudor-knotcoord: 110..146
e-value: 6.0E-6
score: 26.0
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 4..66
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 110..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig95contigF-serratus_M_contig95:794974..829804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig95.20862.1mRNA_F-serratus_M_contig95.20862.1Fucus serratus malemRNAF-serratus_M_contig95 794791..831250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig95.20862.1 ID=prot_F-serratus_M_contig95.20862.1|Name=mRNA_F-serratus_M_contig95.20862.1|organism=Fucus serratus male|type=polypeptide|length=278bp
MERGSIGPIAELSHDLLTNCMLWLNMHELGLSAAVCSIWRVAAEEDGVWR
FWWSRRFREDPPRSQGRKGYGQLKRLHRYRFDDPQVGDKIEVSWEGRFRL
ESLDVFVGRSWWEATVVQKVDGYRYQIHYPGWDSNWDEWVSRDRLRWPVD
PSYLSTIFMVRDKIEVWCTGTHVKGAWLQARVRQQIKDDRVSLKNVLATS
PRTVWVPRENCRLVAVGAVPAVSRGRGRFGKMDASRQEGLTRTLRSLSVG
ARNPLAGIAGFRAAVRRRVSVLRMRGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025995Tudor-knot
IPR036047F-box-like_dom_sf
IPR016197Chromo-like_dom_sf