prot_F-serratus_M_contig95.20859.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig95.20859.1
Unique Nameprot_F-serratus_M_contig95.20859.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length139
Homology
BLAST of mRNA_F-serratus_M_contig95.20859.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.030e-22
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 MNAFTTIFVILSGDSWSAVMFDARRATGWVSVIYFVSLIILGMMIIMTLFLAILLSNFGGEDETDAE 67
            MNAFTTIF ILSG++W+ VM+DARRATGWVSV YFVSLII+GMMI+M LFLAILLSNF  +D+ DAE
Sbjct:  681 MNAFTTIFEILSGENWNTVMYDARRATGWVSVFYFVSLIIMGMMIVMNLFLAILLSNFTNKDDVDAE 747          
BLAST of mRNA_F-serratus_M_contig95.20859.1 vs. uniprot
Match: A0A6H5JIB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB7_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.060e-20
Identity = 52/73 (71.23%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    1 MNAFTTIF------VILSGDSWSAVMFDARRATGWVSVIYFVSLIILGMMIIMTLFLAILLSNFGGEDETDAE 67
            MNAFTTIF       ILSG++W+ VM+DARRATGWVSV YFVSLII+GMMI+M LFLAILLSNF  +D+ DAE
Sbjct:  177 MNAFTTIFEASRCSTILSGENWNTVMYDARRATGWVSVFYFVSLIIMGMMIVMNLFLAILLSNFTNKDDVDAE 249          
BLAST of mRNA_F-serratus_M_contig95.20859.1 vs. uniprot
Match: D8LI93_ECTSI (Similar to sodium channel, voltage-gated, type IX, alpha isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI93_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 5.200e-18
Identity = 46/69 (66.67%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 MNAFTTIFVILSGDSWSAVMFDARRATGWVSVIYFVSLIILGMMIIMTLFLAILLSNFGG--EDETDAE 67
            ++AFTT+F +LSG++W+A M+ ARRA GWVSV YFVSLII+GMMI+M+LFLAILLS+F    +DE DAE
Sbjct:  413 LHAFTTVFEVLSGENWNATMYSARRAVGWVSVFYFVSLIIVGMMIVMSLFLAILLSHFATPEQDEADAE 481          
BLAST of mRNA_F-serratus_M_contig95.20859.1 vs. uniprot
Match: A0A6H5KPD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD7_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.320e-17
Identity = 42/66 (63.64%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    1 MNAFTTIFVILSGDSWSAVMFDARRATGWVSVIYFVSLIILGMMIIMTLFLAILLSNFGGEDETDA 66
            ++AFTT+F +LSG++W+A M+ ARRA GWVSVIYFVSLI++GMMI+M+LFLAILLS+F   ++ +A
Sbjct:  799 LHAFTTVFEVLSGENWNATMYSARRAVGWVSVIYFVSLIVVGMMIVMSLFLAILLSHFATPEQDEA 864          
BLAST of mRNA_F-serratus_M_contig95.20859.1 vs. uniprot
Match: A0A7S1GBX1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBX1_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 5.240e-14
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    3 AFTTIFVILSGDSWSAVMFDARRATGWVSVIYFVSLIILGMMIIMTLFLAILLSNFGGEDE 63
            AF TIF +L+G++W+ VM+D  RATGW SV+YFVSL++LG  I++ LFLAILL NF G +E
Sbjct:  481 AFVTIFQVLTGENWNVVMYDGWRATGWTSVLYFVSLVVLGNFIVLNLFLAILLGNFEGMEE 541          
BLAST of mRNA_F-serratus_M_contig95.20859.1 vs. uniprot
Match: A0A7S2QWF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QWF6_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.980e-13
Identity = 38/57 (66.67%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    3 AFTTIFVILSGDSWSAVMFDARRATGWVSVIYFVSLIILGMMIIMTLFLAILLSNFG 59
            AF TIF ILSG++W+AVM+D  RAT  ++V+YF SLI+ GM I+MTLFLAILL+NFG
Sbjct:  727 AFVTIFQILSGENWNAVMYDGWRATSGLAVVYFFSLIVFGMFIVMTLFLAILLNNFG 783          
BLAST of mRNA_F-serratus_M_contig95.20859.1 vs. uniprot
Match: A0A7R9YD26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD26_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 4.870e-13
Identity = 37/71 (52.11%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    1 MNAFTTIFVILSGDSWSAVMFDARRATGWVSVIYFVSLIILGMMIIMTLFLAILLSNFGGE-DETDAEEES 70
            +N+  T+F++L+ + W+ VM+DA RATGW +VIYFV+LI+LG++ ++ LFLAILLS F    D+ D E+ES
Sbjct:  237 LNSMATVFIVLTAEMWNTVMYDAWRATGWPAVIYFVALIVLGLVFVLNLFLAILLSAFESRLDDEDKEDES 307          
BLAST of mRNA_F-serratus_M_contig95.20859.1 vs. uniprot
Match: J9FXK4_9SPIT (Voltage-gated Ion Channel (VIC) Superfamily n=2 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9FXK4_9SPIT)

HSP 1 Score: 73.6 bits (179), Expect = 1.750e-12
Identity = 37/63 (58.73%), Postives = 51/63 (80.95%), Query Frame = 0
Query:    1 MNAFTTIFVILSGDSWSAVMFDARRATGWVSVIYFVSLIILGMMIIMTLFLAILLSNFGGEDE 63
            +NAFTTIF++L GD W+ +M++  R+TG  S+++FV+L+I G MI+M LFLAILL NFG EDE
Sbjct:  771 LNAFTTIFIVLIGDGWNNIMYNYARSTGGPSMVFFVTLVIFGKMILMNLFLAILLRNFG-EDE 832          
BLAST of mRNA_F-serratus_M_contig95.20859.1 vs. uniprot
Match: G4YKH5_PHYSP (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4YKH5_PHYSP)

HSP 1 Score: 70.5 bits (171), Expect = 2.040e-11
Identity = 36/66 (54.55%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    6 TIFVILSGDSWSAVMFDARRATGWVSVIYFVSLIILGMMIIMTLFLAILLSNF--GGEDETDAEEE 69
            T+F IL+G++W+ VM D  R++GW SV+YFVSL++LG  I++ LFLAILL NF    ++E DAE E
Sbjct:  541 TVFQILTGENWNVVMLDGWRSSGWSSVLYFVSLVVLGNFIVLNLFLAILLGNFDESNDEERDAERE 606          
BLAST of mRNA_F-serratus_M_contig95.20859.1 vs. uniprot
Match: J9IRR7_9SPIT (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IRR7_9SPIT)

HSP 1 Score: 69.7 bits (169), Expect = 3.840e-11
Identity = 29/57 (50.88%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    2 NAFTTIFVILSGDSWSAVMFDARRATGWVSVIYFVSLIILGMMIIMTLFLAILLSNF 58
            NAF TIF++L+G++W A+M+D  RA G +++++FVS +++G +I++ LFLAILL NF
Sbjct:  718 NAFITIFIVLTGENWDAIMYDFTRAKGSIAILFFVSFVVIGQLILLNLFLAILLKNF 774          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig95.20859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVE6_ECTSI1.030e-2277.61Voltage Gated Calcium/Sodium Channel subunit alpha... [more]
A0A6H5JIB7_9PHAE1.060e-2071.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI93_ECTSI5.200e-1866.67Similar to sodium channel, voltage-gated, type IX,... [more]
A0A6H5KPD7_9PHAE1.320e-1763.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1GBX1_9STRA5.240e-1460.66Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2QWF6_9STRA1.980e-1366.67Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
A0A7R9YD26_9STRA4.870e-1352.11Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
J9FXK4_9SPIT1.750e-1258.73Voltage-gated Ion Channel (VIC) Superfamily n=2 Ta... [more]
G4YKH5_PHYSP2.040e-1154.55Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
J9IRR7_9SPIT3.840e-1150.88Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 2..60
e-value: 2.4E-10
score: 40.1
NoneNo IPR availableGENE3D1.10.287.70coord: 1..62
e-value: 1.2E-12
score: 49.7
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMcoord: 2..95
NoneNo IPR availablePANTHERPTHR10037:SF62SODIUM CHANNEL PROTEIN 60Ecoord: 2..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..139
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availableTMHMMTMhelixcoord: 28..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig95contigF-serratus_M_contig95:743060..743720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig95.20859.1mRNA_F-serratus_M_contig95.20859.1Fucus serratus malemRNAF-serratus_M_contig95 743060..743740 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig95.20859.1 ID=prot_F-serratus_M_contig95.20859.1|Name=mRNA_F-serratus_M_contig95.20859.1|organism=Fucus serratus male|type=polypeptide|length=139bp
MNAFTTIFVILSGDSWSAVMFDARRATGWVSVIYFVSLIILGMMIIMTLF
LAILLSNFGGEDETDAEEESNKGDDHDEKGDGDKGESKSTEEEGNKRNRS
DGEMGIVGNSERVGRAGAPRTDGRTTKNIIDEIDYSVGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom