prot_F-serratus_M_contig95.20854.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig95.20854.1
Unique Name	prot_F-serratus_M_contig95.20854.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	160

Homology

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BLAST of mRNA_F-serratus_M_contig95.20854.1 vs. uniprot
Match: A0A6H5KHR8_9PHAE (Sep15_SelM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHR8_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 7.720e-50
Identity = 80/128 (62.50%), Postives = 97/128 (75.78%), Query Frame = 0

Query:   31 KLESATCRTLGFAPKLPCSTCDRIKDIVADEALTNECTQCCTETKRSTKKYVSAKLVYDPRLLNADVQLKGFIENRAADHPALILQPSAYAKTVLLMSEERGGTSGVDTVSIRRWKEDSIADYLREHL 158
            +LE   C  LGF   + CSTC R ++IVADE+LT+EC QCC E K S+KKY SAKLVYDPR L+AD +L+GF+ +RA DHPAL L+P+ YAKTVLLMSEE      VD ++I+RWK DSIADYL EHL
Sbjct:   27 ELEQHQCNELGFT-SVSCSTCKRFEEIVADESLTDECLQCCQEAKSSSKKYASAKLVYDPRWLSADPELRGFVNDRATDHPALELEPTLYAKTVLLMSEEGADADDVDVINIKRWKVDSIADYLNEHL 153

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BLAST of mRNA_F-serratus_M_contig95.20854.1 vs. uniprot
Match: A0A835Z2C5_9STRA (Sep15_SelM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2C5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.220e-21
Identity = 53/142 (37.32%), Postives = 74/142 (52.11%), Query Frame = 0

Query:   24 DGGASVDKLESATCRTLGFAPKLPCSTCDRIKDIVADEALTNECTQCCTETKRSTK-----KYVSAKLVYDPRLLNADVQLKGFIENRAADHPALILQPSAYAKTVLLMSEERGGTSGV--DTVSIRRWKEDSIADYLREHL 158
            D G +   L++  C  LGF   L C+TCDR+KDIV DEALTNEC  CCT    +T      +Y  A+LV D R+ +A   +  F+ + A D   L +     A   LL+ E      G   + + I +W  D I +YL+E+L
Sbjct:   28 DAGPTKTALDATKCLELGFTEALLCATCDRVKDIVGDEALTNECLNCCTTPPEATASGGTARYQFARLVLDRRIQSAFESVNAFVNDYAVDFEQLEVDHGPGALPQLLLYESEDDVEGPYSERIRIDKWPTDVIVEYLKENL 169

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig95.20854.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig95.20854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KHR8_9PHAE	7.720e-50	62.50	Sep15_SelM domain-containing protein n=2 Tax=Ectoc...	[more]
A0A835Z2C5_9STRA	4.220e-21	37.32	Sep15_SelM domain-containing protein n=1 Tax=Tribo...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038219	Selenoprotein F/M superfamily	GENE3D	3.40.30.50		coord: 84..158 e-value: 6.5E-6 score: 28.4
IPR039992	Selenoprotein F/M	PANTHER	PTHR13077	FAMILY NOT NAMED	coord: 25..158
None	No IPR available	PANTHER	PTHR13077:SF6	SELENOPROTEIN F	coord: 25..158
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..17
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..159
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..18 score: 0.628
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 70..158

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig95	contig	F-serratus_M_contig95:682444..696888 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig95.20854.1	mRNA_F-serratus_M_contig95.20854.1	Fucus serratus male	mRNA	F-serratus_M_contig95 682406..697779 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig95.20854.1 ID=prot_F-serratus_M_contig95.20854.1|Name=mRNA_F-serratus_M_contig95.20854.1|organism=Fucus serratus male|type=polypeptide|length=160bp
MKSFILVLSSIISSFTIGGSSTTDGGASVDKLESATCRTLGFAPKLPCST
CDRIKDIVADEALTNECTQCCTETKRSTKKYVSAKLVYDPRLLNADVQLK
GFIENRAADHPALILQPSAYAKTVLLMSEERGGTSGVDTVSIRRWKEDSI
ADYLREHLS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038219	Sep15/SelM_sf
IPR039992	Sep15_SelM
IPR036249	Thioredoxin-like_sf