prot_F-serratus_M_contig95.20829.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig95.20829.1
Unique Nameprot_F-serratus_M_contig95.20829.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length86
Homology
BLAST of mRNA_F-serratus_M_contig95.20829.1 vs. uniprot
Match: A0A6H5KD69_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD69_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 2.460e-45
Identity = 79/85 (92.94%), Postives = 84/85 (98.82%), Query Frame = 0
Query:    1 MRGLPYRASKSEVMGFFKGCSIPEEGIAFVTRADGRVTGEAYVRFATREDAKMGIRKDREMMGSRYIELFTSSPEEMSRYANTKR 85
            MRGLPYRASKSEVM FFKGCSIPEEG+AFVTRADGRVTGEAYVRFATREDAKMG+RKDREM+GSRYIELFTSSPEEM+RYAN+KR
Sbjct:  516 MRGLPYRASKSEVMCFFKGCSIPEEGVAFVTRADGRVTGEAYVRFATREDAKMGLRKDREMIGSRYIELFTSSPEEMARYANSKR 600          
BLAST of mRNA_F-serratus_M_contig95.20829.1 vs. uniprot
Match: A0A836CJY6_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJY6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.830e-33
Identity = 58/80 (72.50%), Postives = 71/80 (88.75%), Query Frame = 0
Query:    1 MRGLPYRASKSEVMGFFKGCSIPEEGIAFVTRADGRVTGEAYVRFATREDAKMGIRKDREMMGSRYIELFTSSPEEMSRY 80
            MRGLPYRASK+++M FFKGC++ E G  FV RADGRVTGEAYV+FA+R+DA+ G+R+DR M+G+RYIELF SSPEEMSRY
Sbjct:  154 MRGLPYRASKADIMAFFKGCAVAEVG--FVARADGRVTGEAYVKFASRDDARQGLRRDRGMIGARYIELFASSPEEMSRY 231          
BLAST of mRNA_F-serratus_M_contig95.20829.1 vs. uniprot
Match: A0A835YKV5_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKV5_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.270e-32
Identity = 57/80 (71.25%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    1 MRGLPYRASKSEVMGFFKGCSIPEEGIAFVTRADGRVTGEAYVRFATREDAKMGIRKDREMMGSRYIELFTSSPEEMSRY 80
            MRGLPYRASK+++M FF+GC++ E  + FV RADGRVTGEAYV+FA+REDA+ G+R+DR+M+G+RYIELFTSSPEEM+RY
Sbjct:  238 MRGLPYRASKADIMAFFQGCAVAE--VNFVARADGRVTGEAYVKFASREDARQGLRRDRDMIGNRYIELFTSSPEEMARY 315          
BLAST of mRNA_F-serratus_M_contig95.20829.1 vs. uniprot
Match: A0A7S2V6E7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E7_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.330e-22
Identity = 43/79 (54.43%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    1 MRGLPYRASKSEVMGFFKGCSIPEEGIAFVTRADGRVTGEAYVRFATREDAKMGIRKDREMMGSRYIELFTSSPEEMSR 79
            +RGLP+ ASK++V+ FF G  I E+ I FV RADGRVTGE+YV+F + + AK  + +DR ++GSRY+ELF S+P+E  R
Sbjct:   29 LRGLPFSASKADVLHFFDGYEIVEDSIEFVVRADGRVTGESYVQFTSPDAAKAAMARDRNVIGSRYVELFISTPDEYQR 107          
BLAST of mRNA_F-serratus_M_contig95.20829.1 vs. uniprot
Match: A0A7S3XZQ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZQ0_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 1.750e-21
Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 0
Query:    1 MRGLPYRASKSEVMGFFKGCSIPEEGIAFVTRADGRVTGEAYVRFATR-EDAKMGIRKDREMMGSRYIELFTSSPEEMSRYANT 83
            MRGLPY+A++++V+ FF G  + E+ + F    DGR TG+AYV FA+  E  +  + K+REMMGSRY+ELF SS EEM+R+++T
Sbjct:   22 MRGLPYQANRADVLEFFNGYQVLEDSVVFPVGEDGRATGQAYVVFASAAESRRAAMEKNREMMGSRYVELFMSSQEEMARHSST 105          
BLAST of mRNA_F-serratus_M_contig95.20829.1 vs. uniprot
Match: A0A7S3YKW9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKW9_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 2.120e-21
Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    1 MRGLPYRASKSEVMGFFKGCSIPEEGIAFVTRADGRVTGEAYVRFATREDAKMGIRKDREMMGSRYIELFTSSPEEMSRYANTKR 85
            +RG P+ A+K +V+GFF+G  + E+ I FV RADG++TGE YVR  + EDAK  +  DR +MG RY+ELF S  EE S+  +  R
Sbjct:   29 LRGCPFTATKRDVLGFFRGHPVVEDSIEFVRRADGKMTGEVYVRLPSAEDAKRAMALDRSLMGRRYVELFISGVEEYSKVTSAGR 113          
BLAST of mRNA_F-serratus_M_contig95.20829.1 vs. uniprot
Match: A0A7S1TWY6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWY6_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.130e-21
Identity = 42/79 (53.16%), Postives = 58/79 (73.42%), Query Frame = 0
Query:    1 MRGLPYRASKSEVMGFFKGCSIPEEGIAFVTRADGRVTGEAYVRFATREDAKMGIRKDREMMGSRYIELFTSSPEEMSR 79
            +RGLP+ A+  +V+GFF    +  +G+ FV RADG+VTGEAYV F++ E AK  +  DR+ +GSRYIELF SSP+E +R
Sbjct:   27 LRGLPFSATAEDVVGFFGDFEVVADGVKFVLRADGKVTGEAYVTFSSAEQAKDAMVMDRQSIGSRYIELFPSSPQEAAR 105          
BLAST of mRNA_F-serratus_M_contig95.20829.1 vs. uniprot
Match: A0A5K1CJV8_9MAGN (RRM domain-containing protein (Fragment) n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1CJV8_9MAGN)

HSP 1 Score: 91.7 bits (226), Expect = 8.030e-21
Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    1 MRGLPYRASKSEVMGFFKGCSIPEEGIAFVTRADGRVTGEAYVRFATREDAKMGIRKDREMMGSRYIELFTSSPEEMSRYANTKR 85
            +RGLPY  +KSE++ FFK   + E  I   +R DG+ TGEA+V FA+  D+K  + KD+ M+GSRY+ELF S+PEE+SR A+  R
Sbjct:  158 LRGLPYSVTKSEIIDFFKDFELTEANIHIASRYDGKATGEAFVEFASASDSKKAMCKDKMMIGSRYVELFPSTPEELSRAASRSR 242          
BLAST of mRNA_F-serratus_M_contig95.20829.1 vs. uniprot
Match: A0A7N0TIK1_KALFE (RRM domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TIK1_KALFE)

HSP 1 Score: 92.0 bits (227), Expect = 1.020e-20
Identity = 44/85 (51.76%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    1 MRGLPYRASKSEVMGFFKGCSIPEEGIAFVTRADGRVTGEAYVRFATREDAKMGIRKDREMMGSRYIELFTSSPEEMSRYANTKR 85
            MRGLPY ASK +++ FFK  ++ E+ I FV   +GR +G+A+V+FA+ ED+K  + KDR  +GSRY+ELF S+PEEMSR  +  R
Sbjct:  192 MRGLPYSASKDDIVNFFKDFTLSEDAIHFVLNWEGRPSGDAFVKFASAEDSKAAMVKDRMSVGSRYVELFPSTPEEMSRALSKAR 276          
BLAST of mRNA_F-serratus_M_contig95.20829.1 vs. uniprot
Match: A0A7I8J173_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8J173_SPIIN)

HSP 1 Score: 90.5 bits (223), Expect = 1.400e-20
Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    1 MRGLPYRASKSEVMGFFKGCSIPEEGIAFVTRADGRVTGEAYVRFATREDAKMGIRKDREMMGSRYIELFTSSPEEMSRYANTKR 85
            +RGLP+ AS+++++ FF G  +PE+ +    RADG+ TGEA+V F + E+AK  + KDR  +GSRY+ELF S+PEE SR  +  R
Sbjct:  134 LRGLPFSASRADIVDFFAGFDLPEDKVHIALRADGKATGEAFVEFPSSEEAKRAMNKDRMTIGSRYVELFPSTPEEASRAHSRSR 218          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig95.20829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD69_9PHAE2.460e-4592.94RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CJY6_9STRA3.830e-3372.50RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835YKV5_9STRA1.270e-3271.25RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2V6E7_9STRA1.330e-2254.43Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XZQ0_HETAK1.750e-2151.19Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3YKW9_HETAK2.120e-2149.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1TWY6_9STRA5.130e-2153.16Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A5K1CJV8_9MAGN8.030e-2150.59RRM domain-containing protein (Fragment) n=2 Tax=N... [more]
A0A7N0TIK1_KALFE1.020e-2051.76RRM domain-containing protein n=1 Tax=Kalanchoe fe... [more]
A0A7I8J173_SPIIN1.400e-2048.24Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 2..67
e-value: 3.2E-5
score: 23.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 1..74
score: 8.655
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..83
e-value: 3.1E-25
score: 90.0
NoneNo IPR availablePANTHERPTHR13976HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATEDcoord: 1..82
NoneNo IPR availablePANTHERPTHR13976:SF22AT27789Pcoord: 1..82
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 1..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig95contigF-serratus_M_contig95:212764..214197 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig95.20829.1mRNA_F-serratus_M_contig95.20829.1Fucus serratus malemRNAF-serratus_M_contig95 212556..214313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig95.20829.1 ID=prot_F-serratus_M_contig95.20829.1|Name=mRNA_F-serratus_M_contig95.20829.1|organism=Fucus serratus male|type=polypeptide|length=86bp
MRGLPYRASKSEVMGFFKGCSIPEEGIAFVTRADGRVTGEAYVRFATRED
AKMGIRKDREMMGSRYIELFTSSPEEMSRYANTKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf