prot_F-serratus_M_contig949.20817.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig949.20817.1
Unique Name	prot_F-serratus_M_contig949.20817.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	190

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 9.670e-98
Identity = 147/191 (76.96%), Postives = 167/191 (87.43%), Query Frame = 0

Query:    1 MFRRVATVAGR--ITARGVHTEAKLQQMGIELPTPKAPLGNFVMSVRTGNLIYTAGHLPISIDGELTTGKVGHDVSEEEAKEAARKVAIQLIATLKKDLGDLDRVKRIVKLVGFVNCTDGFTAQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFEDNAGTGSKRSSDNDWKVTKRP 189
            M RRV+++ GR  +  R VHTEAKL+++GIELPTPKAPLGNFVM+VRTGNL+YT+GHLP S++GE TTGKVG +++EEEA+EAARKVAIQLIA++KKDLGDLDRV RIVKLVGFVNCTDGF  QPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEF+D    G     D+DW V KRP
Sbjct:    1 MLRRVSSLVGRAAVRPRRVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDDGGKKG-----DDDWTVLKRP 186

[Close]

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.570e-70
Identity = 106/168 (63.10%), Postives = 139/168 (82.74%), Query Frame = 0

Query:    2 FRRVATVAGRITARGVHTEAKLQQMGIELPTPKAPLGNFVMSVRTGNLIYTAGHLPISIDGELTTGKVGHDVSEEEAKEAARKVAIQLIATLKKDLGDLDRVKRIVKLVGFVNCTDGFTAQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 169
            F +  T+AG   ++ +HTEAKL +MG++LP+P  P GNF M+V++G +IY +GHLP   +G+L TGKVG +VS EEA+ AA+ +A+ L+++LKK++GDLDRVKRIVKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE ED
Sbjct:   20 FPQSTTIAG---SQKIHTEAKLTEMGLKLPSPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 184

[Close]

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.660e-69
Identity = 106/168 (63.10%), Postives = 138/168 (82.14%), Query Frame = 0

Query:    2 FRRVATVAGRITARGVHTEAKLQQMGIELPTPKAPLGNFVMSVRTGNLIYTAGHLPISIDGELTTGKVGHDVSEEEAKEAARKVAIQLIATLKKDLGDLDRVKRIVKLVGFVNCTDGFTAQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 169
            F +  T+AG   ++ +HTEAKL +MG++LP P  P GNF M+V++G +IY +GHLP   +G+L TGKVG +VS EEA+ AA+ +A+ L+++LKK++GDLDRVKRIVKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE ED
Sbjct:   71 FPQSTTIAG---SQKIHTEAKLTEMGLKLPPPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 235

[Close]

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot
Match: A0A5A8CF06_CAFRO (YjgF_endoribonc domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CF06_CAFRO)

HSP 1 Score: 217 bits (552), Expect = 4.420e-69
Identity = 106/175 (60.57%), Postives = 133/175 (76.00%), Query Frame = 0

Query:    4 RVATVAGRIT---------ARGVHTEAKLQQMGIELPTPKAPLGNFVMSVRTGNLIYTAGHLPISIDGELTTGKVGHDVSEEEAKEAARKVAIQLIATLKKDLGDLDRVKRIVKLVGFVNCTDGFTAQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 169
            R AT A R T         ARGVHTEAK+++MG++LPTP  P  N++M  R GNL++TAGHLP+  DG+L  GKVG D + EEA  AAR+ A+ ++ T+K ++GDLD+VKR+VKL GFVNC D F+AQPKV+NGASD   EV GERGVH RSAVGTNALPMNVPVE+EAI+E ++
Sbjct:    5 RAATAAMRATSAPAVRALAARGVHTEAKIEEMGLKLPTPPTPAANYIMCHRVGNLLFTAGHLPMQEDGQLFNGKVGKDFTTEEAYTAARQCALAILGTVKAEIGDLDKVKRVVKLTGFVNCVDAFSAQPKVLNGASDFMGEVLGERGVHVRSAVGTNALPMNVPVEVEAIIEIDE 179

[Close]

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 210 bits (535), Expect = 7.460e-67
Identity = 103/153 (67.32%), Postives = 126/153 (82.35%), Query Frame = 0

Query:   17 VHTEAKLQQMGIELPTPKAPLGNFVMSVRTGNLIYTAGHLPISIDGELTTGKVGHDVSEEEAKEAARKVAIQLIATLKKDLGDLDRVKRIVKLVGFVNCTDGFTAQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 169
            V  EA+L Q+GI+LP   AP GN+ ++VRTGNL++ AGH+P+   G L TGKVG D S EE +EAA+ +AI L+ATLK +LGDLD+VKRIVKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE ED
Sbjct:    2 VQIEARLAQLGIDLPDVIAPKGNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 154

[Close]

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot
Match: A0A812PJA3_9DINO (TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PJA3_9DINO)

HSP 1 Score: 209 bits (532), Expect = 7.150e-66
Identity = 102/157 (64.97%), Postives = 128/157 (81.53%), Query Frame = 0

Query:   11 RITARGVHTEAKLQQMGIELPTPKAPLGNFVMSVRTGNLIYTAGHLPISIDGELTTGKVGHDVSEEEAKEAARKVAIQLIATLKKDLGDLDRVKRIVKLVGFVNCTDGFTAQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEF 167
            R+ A GVHTEAKL+++G+ELP P     N+++SVR+G+ I+TAGHLP+  DG L +GKVG D++ EEA  AA  V + +++TLK +LGDLDRVKRIVKL GFVNC D F+AQPKV+NG SDLF +VFG RGVH+RSA+GTNALP+NVPVEIEAIVE 
Sbjct:   23 RLGACGVHTEAKLEELGLELPPPGKAQANYILSVRSGDTIFTAGHLPMMHDGTLMSGKVGVDLNTEEAYAAAELVGLNILSTLKAELGDLDRVKRIVKLNGFVNCVDSFSAQPKVINGISDLFGKVFGARGVHARSALGTNALPLNVPVEIEAIVEL 179

[Close]

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot
Match: A0A835Z1E3_9STRA (Putative translation initiation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E3_9STRA)

HSP 1 Score: 208 bits (530), Expect = 8.550e-66
Identity = 101/166 (60.84%), Postives = 129/166 (77.71%), Query Frame = 0

Query:    5 VATVAGRITARGVHTEAKLQQMGIELPTPKAPLGNFVMSVRTGNLIYTAGHLPISIDGELTTGKVGHDVSEEEAKEAARKVAIQLIATLKKDLGDLDRVKRIVKLVGFVNCTDGFTAQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFEDN 170
            VAT   ++  RGV  EA+L Q GI+L  P  P GN+V +VR+GN ++ AGH+P+  D  L  GKVG DV+ E+A   AR+VAI +++TLK +LGDLDRV RIVKLVGFVNCTD FT QP V+NGASDLF EVFG++GVH+RSAVGTNALP+ +PVEIEA++EF ++
Sbjct:    9 VATPTFQLAKRGVQIEARLAQRGIQLSDPVPPKGNYVPAVRSGNTLFLAGHIPLMPDNNLAKGKVGKDVTPEQANAIARQVAINILSTLKVELGDLDRVTRIVKLVGFVNCTDDFTGQPGVINGASDLFVEVFGKKGVHARSAVGTNALPLGIPVEIEAVIEFSED 174

[Close]

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot
Match: A0A024UKU1_9STRA (YjgF_endoribonc domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UKU1_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.910e-65
Identity = 103/169 (60.95%), Postives = 128/169 (75.74%), Query Frame = 0

Query:    1 MFRRVATVAGRITARGVHTEAKLQQMGIELPTPKAPLGNFVMSVRTGNLIYTAGHLPISIDGELTTGKVGHDVSEEEAKEAARKVAIQLIATLKKDLGDLDRVKRIVKLVGFVNCTDGFTAQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 169
            MFR +   A    AR VHTEA+++++G  LP    P GN+  SVR GNLI+TAGHLP    GEL  GKVG D++ EE  EAA  VA+ L+ATLK++LGDLDRVKRIVK+VGFVNC DGFTAQP V+NG SD   ++FG+RG+H+RSAVGTNALP+ +PVE+E IVE +D
Sbjct:    1 MFRSLLKPAAA-AARFVHTEARIKELGYTLPAVATPKGNYRNSVRMGNLIFTAGHLPQPAGGELIKGKVGVDLTPEEGYEAAHHVALALVATLKQELGDLDRVKRIVKVVGFVNCVDGFTAQPSVINGTSDTLVKIFGDRGIHARSAVGTNALPLGIPVEVEIIVEIQD 168

[Close]

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot
Match: A0A2R5GI79_9STRA (Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI79_9STRA)

HSP 1 Score: 206 bits (525), Expect = 6.380e-65
Identity = 99/164 (60.37%), Postives = 130/164 (79.27%), Query Frame = 0

Query:    6 ATVAGRITARGVHTEAKLQQMGIELPTPKAPLGNFVMSVRTGNLIYTAGHLPISIDGELTTGKVGHDVSEEEAKEAARKVAIQLIATLKKDLGDLDRVKRIVKLVGFVNCTDGFTAQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 169
            A  A  +  RGVHTEAKL+++G  LP   +P G++ + VR+GN ++TAGHLP   +G+L  GKVG D+S EEA +AA+  A+ ++ATLK +LGDLDRV R+VK+VGFVNC DGF  QP+V+NGASDLFAEV GERG+H+RSAVGTN+LP+N+PVE+EAIVE  +
Sbjct:   20 ALQAAPVLMRGVHTEAKLEKLGYTLPQVASPKGSYQLCVRSGNQMFTAGHLPQPANGDLLVGKVGVDLSVEEANKAAQYCALSILATLKAELGDLDRVARVVKVVGFVNCADGFAQQPQVINGASDLFAEVLGERGLHARSAVGTNSLPLNIPVEVEAIVEISE 183

[Close]

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot
Match: A0A6G0WDN9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDN9_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.190e-64
Identity = 101/170 (59.41%), Postives = 128/170 (75.29%), Query Frame = 0

Query:    1 MFRRVATVAGRITARGVHTEAKLQQMGIELPTPKAPLGNFVMSVRTGNLIYTAGHLPISIDGELTTGKVGHDVSEEEAKEAARKVAIQLIATLKKDLGDLDRVKRIVKLVGFVNCTDGFTAQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFEDN 170
            MF RV   +     R VHTE +++++G  LP   AP GN+  SVR+GN+I+TAGHLP    G+L  GK+G D++ ++  EAA+  A+ L ATLK +LGDLD+VKRIVK+VGFVNC DGFTAQP+V+NGASD   ++FGERGVHSRSAVGTNALP+ V VE+E IVE EDN
Sbjct:    1 MFSRVLAKSSSALRRSVHTENRIKELGYTLPGVAAPKGNYRNSVRSGNMIFTAGHLPQPAGGDLVKGKIGDDLTIDQGYEAAQHCALALCATLKHELGDLDKVKRIVKVVGFVNCVDGFTAQPQVINGASDTLGKIFGERGVHSRSAVGTNALPLGVAVEVECIVEVEDN 170

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig949.20817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXY4_9PHAE	9.670e-98	76.96	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR9_9STRA	1.570e-70	63.10	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
W7TB75_9STRA	1.660e-69	63.10	Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad...	[more]
A0A5A8CF06_CAFRO	4.420e-69	60.57	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR0_9STRA	7.460e-67	67.32	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A812PJA3_9DINO	7.150e-66	64.97	TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2...	[more]
A0A835Z1E3_9STRA	8.550e-66	60.84	Putative translation initiation inhibitor n=1 Tax=...	[more]
A0A024UKU1_9STRA	3.910e-65	60.95	YjgF_endoribonc domain-containing protein n=3 Tax=...	[more]
A0A2R5GI79_9STRA	6.380e-65	60.37	Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID...	[more]
A0A6G0WDN9_9STRA	1.190e-64	59.41	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 20..162 e-value: 1.2E-31 score: 109.9
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 16..167 e-value: 1.8E-62 score: 211.3
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 19..166
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 18..169

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig949	contig	F-serratus_M_contig949:16603..25431 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig949.20817.1	mRNA_F-serratus_M_contig949.20817.1	Fucus serratus male	mRNA	F-serratus_M_contig949 16524..26045 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig949.20817.1 ID=prot_F-serratus_M_contig949.20817.1|Name=mRNA_F-serratus_M_contig949.20817.1|organism=Fucus serratus male|type=polypeptide|length=190bp
MFRRVATVAGRITARGVHTEAKLQQMGIELPTPKAPLGNFVMSVRTGNLI
YTAGHLPISIDGELTTGKVGHDVSEEEAKEAARKVAIQLIATLKKDLGDL
DRVKRIVKLVGFVNCTDGFTAQPKVVNGASDLFAEVFGERGVHSRSAVGT
NALPMNVPVEIEAIVEFEDNAGTGSKRSSDNDWKVTKRP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013813	Endoribo_LPSP/chorism_mut-like
IPR035959	RutC-like_sf