prot_F-serratus_M_contig949.20816.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig949.20816.1
Unique Name	prot_F-serratus_M_contig949.20816.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	112

Homology

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BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot
Match: A0A6H5KXF6_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXF6_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.580e-60
Identity = 93/111 (83.78%), Postives = 106/111 (95.50%), Query Frame = 0

Query:    1 MTPEGVLLTGTVGDTISEEDGAAAARLVALNMLATLKYKLGDLDRVARVVKLNGFVQCVDGFTGQPRVIDGASDLLAKAFGEKGVHARSAVGTSSLPLDIPVELEAIVEVH 111
            MTPEGVLLTGTVGD+I+EE+G AAA LVALNMLATLKY+LGDLDRVAR+VKLNG+VQCVDG+TGQP +++GASDLLA+AFGEKG+HARSAVG SS+PLDIPVELEAIVEV 
Sbjct:   69 MTPEGVLLTGTVGDSITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYTGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 179

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BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 144 bits (363), Expect = 5.220e-42
Identity = 70/111 (63.06%), Postives = 90/111 (81.08%), Query Frame = 0

Query:    1 MTPEGVLLTGTVGDTISEEDGAAAARLVALNMLATLKYKLGDLDRVARVVKLNGFVQCVDGFTGQPRVIDGASDLLAKAFGEKGVHARSAVGTSSLPLDIPVELEAIVEVH 111
            +   GVL+TG VG   S E+G  AA+++A+N+LATLK +LGDLD+V R+VKL GFV CVDGF+ QP V++GASD   + FG+KGVHARSAVGT++LPL+IPVE+EAIVEV 
Sbjct:   43 LLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVE 153

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BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot
Match: A0A812PJA3_9DINO (TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PJA3_9DINO)

HSP 1 Score: 143 bits (361), Expect = 3.160e-41
Identity = 68/111 (61.26%), Postives = 90/111 (81.08%), Query Frame = 0

Query:    1 MTPEGVLLTGTVGDTISEEDGAAAARLVALNMLATLKYKLGDLDRVARVVKLNGFVQCVDGFTGQPRVIDGASDLLAKAFGEKGVHARSAVGTSSLPLDIPVELEAIVEVH 111
            M  +G L++G VG  ++ E+  AAA LV LN+L+TLK +LGDLDRV R+VKLNGFV CVD F+ QP+VI+G SDL  K FG +GVHARSA+GT++LPL++PVE+EAIVE++
Sbjct:   70 MMHDGTLMSGKVGVDLNTEEAYAAAELVGLNILSTLKAELGDLDRVKRIVKLNGFVNCVDSFSAQPKVINGISDLFGKVFGARGVHARSALGTNALPLNVPVEIEAIVELY 180

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BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.650e-41
Identity = 69/107 (64.49%), Postives = 88/107 (82.24%), Query Frame = 0

Query:    5 GVLLTGTVGDTISEEDGAAAARLVALNMLATLKYKLGDLDRVARVVKLNGFVQCVDGFTGQPRVIDGASDLLAKAFGEKGVHARSAVGTSSLPLDIPVELEAIVEVH 111
            G LLTG VG  +S E+   AA+L+ALN+L++LK ++GDLDRV R+VKL GFV CVDGF+ QP V++GASD   + FG+KGVHARSAVGT++LPL+IPVE+EAIVEV 
Sbjct:   77 GQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVE 183

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BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot
Match: K3WLZ8_GLOUD (YjgF_endoribonc domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLZ8_GLOUD)

HSP 1 Score: 142 bits (357), Expect = 7.080e-41
Identity = 67/107 (62.62%), Postives = 88/107 (82.24%), Query Frame = 0

Query:    5 GVLLTGTVGDTISEEDGAAAARLVALNMLATLKYKLGDLDRVARVVKLNGFVQCVDGFTGQPRVIDGASDLLAKAFGEKGVHARSAVGTSSLPLDIPVELEAIVEVH 111
            G L+ G +G  ++ EDG  AA  VAL+++ATLK++LGDLD+V R+VKL GFV CVDGFTGQP VI+GASD + K FG+KG+HARSAVGT++LPL++ VE+EAIVE+ 
Sbjct:   64 GDLIVGKIGKDLTPEDGYDAAHHVALSLMATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAIVEIE 170

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BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.540e-40
Identity = 69/107 (64.49%), Postives = 88/107 (82.24%), Query Frame = 0

Query:    5 GVLLTGTVGDTISEEDGAAAARLVALNMLATLKYKLGDLDRVARVVKLNGFVQCVDGFTGQPRVIDGASDLLAKAFGEKGVHARSAVGTSSLPLDIPVELEAIVEVH 111
            G LLTG VG  +S E+   AA+L+ALN+L++LK ++GDLDRV R+VKL GFV CVDGF+ QP V++GASD   + FG+KGVHARSAVGT++LPL+IPVE+EAIVEV 
Sbjct:  128 GQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVE 234

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BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot
Match: A0A8K1FK53_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK53_PYTOL)

HSP 1 Score: 140 bits (354), Expect = 1.900e-40
Identity = 68/107 (63.55%), Postives = 87/107 (81.31%), Query Frame = 0

Query:    5 GVLLTGTVGDTISEEDGAAAARLVALNMLATLKYKLGDLDRVARVVKLNGFVQCVDGFTGQPRVIDGASDLLAKAFGEKGVHARSAVGTSSLPLDIPVELEAIVEVH 111
            G L+ G +G  ++ E G  AA  VAL+++ATLK++LGDLD+V R+VKL GFV CVDGFTGQP VI+GASD + K FGEKGVHARSAVGT++LPL++ VE+EAIVE+ 
Sbjct:   62 GDLIVGKIGKDLTPEQGYDAAHHVALSLIATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGEKGVHARSAVGTNALPLNVAVEVEAIVEIE 168

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BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot
Match: A0A2D4BR11_PYTIN (Endoribonuclease L-PSP, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR11_PYTIN)

HSP 1 Score: 140 bits (352), Expect = 3.950e-40
Identity = 65/107 (60.75%), Postives = 88/107 (82.24%), Query Frame = 0

Query:    5 GVLLTGTVGDTISEEDGAAAARLVALNMLATLKYKLGDLDRVARVVKLNGFVQCVDGFTGQPRVIDGASDLLAKAFGEKGVHARSAVGTSSLPLDIPVELEAIVEVH 111
            G L+ G +G  ++ E+G  AA  +AL+++ATLK++LGDLD+V R+VKL GFV CVDGFTGQP VI+GASD + K FG+KG+HARSAVGT++LPL++ VE+EAIVE+ 
Sbjct:   63 GDLIVGKIGKDLTPEEGYDAAHHIALSLMATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAIVEIE 169

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BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 6.310e-40
Identity = 65/106 (61.32%), Postives = 86/106 (81.13%), Query Frame = 0

Query:    4 EGVLLTGTVGDTISEEDGAAAARLVALNMLATLKYKLGDLDRVARVVKLNGFVQCVDGFTGQPRVIDGASDLLAKAFGEKGVHARSAVGTSSLPLDIPVELEAIVE 109
            EG   TG VG  ++EE+   AAR VA+ ++A++K  LGDLDRV R+VKL GFV C DGF GQP+V++GASDL A+ FGE+GVH+RSAVGT++LP+++PVE+EAIVE
Sbjct:   63 EGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVE 168

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BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot
Match: A0A485LQZ5_9STRA (Aste57867_24668 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQZ5_9STRA)

HSP 1 Score: 139 bits (349), Expect = 7.650e-40
Identity = 66/110 (60.00%), Postives = 88/110 (80.00%), Query Frame = 0

Query:    2 TPEGVLLTGTVGDTISEEDGAAAARLVALNMLATLKYKLGDLDRVARVVKLNGFVQCVDGFTGQPRVIDGASDLLAKAFGEKGVHARSAVGTSSLPLDIPVELEAIVEVH 111
            T +G L+TG VG  ++ E    AA +VAL++LATLK++LGDL+++ ++VKL GFV CVDGF  QP VI+GASD  AK FG+ GV +RSAVGT++LPL++PVE+EAIVEVH
Sbjct:   44 TADGTLITGKVGKEVTTEQAYDAAHVVALSLLATLKHELGDLNKIKQIVKLTGFVNCVDGFAAQPTVINGASDTFAKVFGDIGVGSRSAVGTNALPLNVPVEIEAIVEVH 153

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig949.20816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXF6_9PHAE	1.580e-60	83.78	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR0_9STRA	5.220e-42	63.06	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A812PJA3_9DINO	3.160e-41	61.26	TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2...	[more]
A0A4D9CNR9_9STRA	3.650e-41	64.49	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
K3WLZ8_GLOUD	7.080e-41	62.62	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
W7TB75_9STRA	1.540e-40	64.49	Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad...	[more]
A0A8K1FK53_PYTOL	1.900e-40	63.55	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A2D4BR11_PYTIN	3.950e-40	60.75	Endoribonuclease L-PSP, putative n=1 Tax=Pythium i...	[more]
A0A6H5KXY4_9PHAE	6.310e-40	61.32	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A485LQZ5_9STRA	7.650e-40	60.00	Aste57867_24668 protein n=1 Tax=Aphanomyces stella...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 6..108 e-value: 5.5E-26 score: 91.5
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 1..110 e-value: 4.3E-45 score: 154.8
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 2..110
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 3..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig949	contig	F-serratus_M_contig949:2132..7813 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig949.20816.1	mRNA_F-serratus_M_contig949.20816.1	Fucus serratus male	mRNA	F-serratus_M_contig949 2038..16291 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig949.20816.1 ID=prot_F-serratus_M_contig949.20816.1|Name=mRNA_F-serratus_M_contig949.20816.1|organism=Fucus serratus male|type=polypeptide|length=112bp
MTPEGVLLTGTVGDTISEEDGAAAARLVALNMLATLKYKLGDLDRVARVV
KLNGFVQCVDGFTGQPRVIDGASDLLAKAFGEKGVHARSAVGTSSLPLDI
PVELEAIVEVH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013813	Endoribo_LPSP/chorism_mut-like
IPR035959	RutC-like_sf