prot_F-serratus_M_contig947.20813.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig947.20813.1
Unique Nameprot_F-serratus_M_contig947.20813.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length72
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig947.20813.1 vs. uniprot
Match: D8LH86_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH86_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 5.920e-20
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0 
Query:    3 KDKRKRVEREPL---VNEAEEVAELEKQVVVNAPARGTQPFTETSRDREPFSSLPLSQRTLRGLEDGGFKTMT 72
            K+KRKR E  P+   V+EA+EVAELE QVV  APARGTQPFTE++ DR+PF++LPLSQRT RGL  GGFKTMT
Sbjct:    2 KNKRKRAE--PVIEQVDEAQEVAELEAQVVATAPARGTQPFTESTGDRQPFTALPLSQRTTRGLTGGGFKTMT 72
[Close]
BLAST of mRNA_F-serratus_M_contig947.20813.1 vs. uniprot
Match: A0A836CCM6_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCM6_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 7.410e-6
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 0 
Query:    5 KRKRVEREPLVNEAEEVAELEKQVVVNAPARGTQPFTETSRDREPFSSLPLSQRTLRGLEDGGFKTMT 72
            KR R E    V+E  E+ +LE++V+  AP +GTQ      R    FS LPLS+RTL+GLE G F +MT
Sbjct:    5 KRPRTELNAPVDEETELTQLEQRVLNEAPPKGTQAAAAGGRQ---FSQLPLSRRTLQGLESGKFDSMT 69
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig947.20813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LH86_ECTSI5.920e-2069.86DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A836CCM6_9STRA7.410e-647.06DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig947contigF-serratus_M_contig947:328304..328519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig947.20813.1mRNA_F-serratus_M_contig947.20813.1Fucus serratus malemRNAF-serratus_M_contig947 328206..328519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig947.20813.1 ID=prot_F-serratus_M_contig947.20813.1|Name=mRNA_F-serratus_M_contig947.20813.1|organism=Fucus serratus male|type=polypeptide|length=72bp
MPKDKRKRVEREPLVNEAEEVAELEKQVVVNAPARGTQPFTETSRDREPF
SSLPLSQRTLRGLEDGGFKTMT
back to top