prot_F-serratus_M_contig947.20811.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig947.20811.1
Unique Nameprot_F-serratus_M_contig947.20811.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length102
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig947.20811.1 vs. uniprot
Match: D8LH89_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH89_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 5.480e-35
Identity = 70/100 (70.00%), Postives = 81/100 (81.00%), Query Frame = 0 
Query:    2 CASAFIAPSAVVKSRRFVTPEVRSTSSTVAPKTTMNMGLEQIVDMVPMVPTEAHDQVLEIANNPLLLSLTASSFGGLTGPIAGCTAVALLIVVLAPPRVD 101
            CASAFIAPSAV KS  F TP VR+TS  VAPK  M MGLEQI D++P+VP+EAH+   E+ANNPLLLS++A SFGGL GPI GC AVA+ IVV+APPRVD
Sbjct:   16 CASAFIAPSAV-KSGSFATPAVRATSM-VAPK--MTMGLEQIADVLPLVPSEAHNAGFEMANNPLLLSVSADSFGGLIGPIGGCLAVAIFIVVMAPPRVD 111
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig947.20811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH89_ECTSI5.480e-3570.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..101
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig947contigF-serratus_M_contig947:287804..292441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig947.20811.1mRNA_F-serratus_M_contig947.20811.1Fucus serratus malemRNAF-serratus_M_contig947 287245..292474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig947.20811.1 ID=prot_F-serratus_M_contig947.20811.1|Name=mRNA_F-serratus_M_contig947.20811.1|organism=Fucus serratus male|type=polypeptide|length=102bp
MCASAFIAPSAVVKSRRFVTPEVRSTSSTVAPKTTMNMGLEQIVDMVPMV
PTEAHDQVLEIANNPLLLSLTASSFGGLTGPIAGCTAVALLIVVLAPPRV
D*
back to top