prot_F-serratus_M_contig943.20791.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig943.20791.1
Unique Name	prot_F-serratus_M_contig943.20791.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	363

Homology

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BLAST of mRNA_F-serratus_M_contig943.20791.1 vs. uniprot
Match: A0A6H5JU30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU30_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 4.040e-118
Identity = 212/399 (53.13%), Postives = 258/399 (64.66%), Query Frame = 0

Query:    1 MAHEYLIVIGFGVTLAVVTISLFLAHVKRISAPNKADPAGTLVSIDLAAALAEDQITA-------------------------------QRKATAKRSKAPNRTDVSVNKHSSDVVLTGSLSERDSSSTIPCTAKAVPLDKLADTQAMLVPPPSVSSSTMVLPSPLWAEAFVKHANSKKKQLAGMVKRGERGAGWEATWERLPPPRRRRVLVAVREELVHAVSHYVGQDEHLFDALCPELRTSALEEEHRATTGFSRLMRRCLDGKLLEPRSRAFSAVQQALAEVASGV-------HIPKDKRGPVRAFLGTFRKLCAYSFCIGVLEAVASGRADGSAGPTIGSVCAALVKTGGSGILLWAFFHGVNQMSATNLTEGDAATGLAASESAEGGSFLVENG 361
            M +E LIV+ FGV LAV +++LF+AHVKRI+APN+ADPAGTLV +DL AALA+D+  A                               Q    A+R + P+    +   H       GS  E         TA AV   +  DTQ       S  ++TMVLPSPLWAEA +KHA  K+K+L  MVK GE  AGWEA WERLP PRRR++L AVREELVHAVS Y+G+DE LFD +CP L  SALEEEHR  +G SRL+R C+DGKL EPRS+AF AV+ ALA  A+G        ++ KDKRGPVRAFL TFRKLC+ SFCIG LEA+ SGRADGSAGPT+GSVC+ALVKTGGSG+LL+AFFHG+ QMSA+ +T+   + GL A     GGS +   G
Sbjct:    1 MTYEALIVVVFGVALAVASVALFIAHVKRINAPNRADPAGTLVHVDLGAALAKDEAAAXXXXXXXXXXXXXXXXXXDSSAGCSGDAFALQPNGAARRRRRPSVETANRCAH-------GSQQE---------TAAAVGTQQPTDTQQPREAGASSYTATMVLPSPLWAEAILKHAEVKRKKLRSMVKSGEIAAGWEAKWERLPRPRRRKLLEAVREELVHAVSSYIGRDEALFDVICPHLSLSALEEEHRGISGLSRLVRGCMDGKLPEPRSKAFVAVRDALAMAATGAAAAAAAENVSKDKRGPVRAFLPTFRKLCSSSFCIGALEAIVSGRADGSAGPTVGSVCSALVKTGGSGVLLFAFFHGLKQMSASEVTD---SAGLPAGVGGGGGSRIPGQG 380

[Close]

BLAST of mRNA_F-serratus_M_contig943.20791.1 vs. uniprot
Match: D8LCX7_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX7_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 2.280e-115
Identity = 202/368 (54.89%), Postives = 247/368 (67.12%), Query Frame = 0

Query:    1 MAHEYLIVIGFGVTLAVVTISLFLAHVKRISAPNKADPAGTLVSIDLAAALAEDQ-------------------------------ITAQRKATAKRSKAPNRTDVSVNKHSSDVVLTGSLSERDSSSTIPCTAKAVPLDKLADTQAMLVPPPSVSSSTMVLPSPLWAEAFVKHANSKKKQLAGMVKRGERGAGWEATWERLPPPRRRRVLVAVREELVHAVSHYVGQDEHLFDALCPELRTSALEEEHRATTGFSRLMRRCLDGKLLEPRSRAFSAVQQALAEVASGV-------HIPKDKRGPVRAFLGTFRKLCAYSFCIGVLEAVASGRADGSAGPTIGSVCAALVKTGGSGILLWAFFHGVNQ 330
            M +E LIVIGFGV LAV +++LF+AHVKRI+APN+ADPAGTLV +DL AALA+D+                                  Q    A+R K P+         +++    GS  E         TA AV   + ADTQ       S  ++TMVLPSPLWAEA +KHA+ K+K+L  MVK GE  AGWEA WERLP PR+R++L AV+EELVHAVS Y+G+D+ LFDA+CP L  SALEEEHR  +G SRL+R CLDGKL EPRS+AF+AV+ ALA+ A G        ++PKDKRGPVRAFL TFRKLC+ SFCIG LEA+ SGRADGSAGPT+GSVC+ALVKTGGSG+LL+AFF G+ Q
Sbjct:   33 MTYEALIVIGFGVALAVASVALFVAHVKRINAPNRADPAGTLVHVDLGAALAKDEAXXXXXXXXXXXXXXXXXTSEDNSAGCSRDAFALQPNGAARRRKRPSV-------ETANRCAEGSQQE---------TAAAVGTQQPADTQQAREAGTSSYTATMVLPSPLWAEAILKHADVKRKKLRSMVKSGEIAAGWEAKWERLPRPRKRKLLEAVKEELVHAVSSYIGRDDALFDAICPHLSVSALEEEHRGISGLSRLVRGCLDGKLSEPRSKAFAAVRDALAKAAIGAAAAAAAENVPKDKRGPVRAFLPTFRKLCSSSFCIGALEAIVSGRADGSAGPTVGSVCSALVKTGGSGVLLFAFFLGLKQ 384

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig943.20791.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig943.20791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JU30_9PHAE	4.040e-118	53.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LCX7_ECTSI	2.280e-115	54.89	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..25
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 26..362
None	No IPR available	TMHMM	TMhelix		coord: 5..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig943	contig	F-serratus_M_contig943:1833..7217 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig943.20791.1	mRNA_F-serratus_M_contig943.20791.1	Fucus serratus male	mRNA	F-serratus_M_contig943 1833..7369 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig943.20791.1 ID=prot_F-serratus_M_contig943.20791.1|Name=mRNA_F-serratus_M_contig943.20791.1|organism=Fucus serratus male|type=polypeptide|length=363bp
MAHEYLIVIGFGVTLAVVTISLFLAHVKRISAPNKADPAGTLVSIDLAAA
LAEDQITAQRKATAKRSKAPNRTDVSVNKHSSDVVLTGSLSERDSSSTIP
CTAKAVPLDKLADTQAMLVPPPSVSSSTMVLPSPLWAEAFVKHANSKKKQ
LAGMVKRGERGAGWEATWERLPPPRRRRVLVAVREELVHAVSHYVGQDEH
LFDALCPELRTSALEEEHRATTGFSRLMRRCLDGKLLEPRSRAFSAVQQA
LAEVASGVHIPKDKRGPVRAFLGTFRKLCAYSFCIGVLEAVASGRADGSA
GPTIGSVCAALVKTGGSGILLWAFFHGVNQMSATNLTEGDAATGLAASES
AEGGSFLVENGL*