prot_F-serratus_M_contig939.20760.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig939.20760.1
Unique Name	prot_F-serratus_M_contig939.20760.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	198

Homology

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BLAST of mRNA_F-serratus_M_contig939.20760.1 vs. uniprot
Match: D7FHG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG6_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 1.270e-62
Identity = 112/179 (62.57%), Postives = 136/179 (75.98%), Query Frame = 0

Query:   14 AVSSAASKSTAFVA--GGSCVQRQTASEKHHERFRDAVGEKRMLSNNIA-RGVRSLQAAGDGKEESEGGFVNPYTAFRKWQMDLIDSKAKSNDKYPEAYEGLMKEPGMTPAKAERLAKLAVSDPILYSIERRKEANEINKTKMDYRKIDGFFPMEWILSGDFGWGFNKKRARLAAEKKA 189
            AV+   S + AFVA  GG  V+ + A+         + G+++ +   I  RGV+ L A+ +G  E E GFVNPYTAFRKWQMDLI+SKAK ++KYPEA+ GLMKEPGMT  KAERLAKL+VSDPILY+IERR+EANEIN+TKMDY KI GFFPMEWI+SGDFGWGFNKK+ RLA E+ A
Sbjct:   12 AVACLVSTAAAFVASGGGHAVRTRAAT---------SAGQQQHVQPAIQQRGVQVLGASEEGAGE-ERGFVNPYTAFRKWQMDLIESKAKGDEKYPEAFAGLMKEPGMTTEKAERLAKLSVSDPILYAIERRREANEINETKMDYDKISGFFPMEWIMSGDFGWGFNKKKKRLAEEEAA 180

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig939.20760.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig939.20760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FHG6_ECTSI	1.270e-62	62.57	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 181..197
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..197
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..18 score: 0.607

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig939	contig	F-serratus_M_contig939:295119..325634 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig939.20760.1	mRNA_F-serratus_M_contig939.20760.1	Fucus serratus male	mRNA	F-serratus_M_contig939 294456..325699 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig939.20760.1 ID=prot_F-serratus_M_contig939.20760.1|Name=mRNA_F-serratus_M_contig939.20760.1|organism=Fucus serratus male|type=polypeptide|length=198bp
MYLVRATAFAAFIAVSSAASKSTAFVAGGSCVQRQTASEKHHERFRDAVG
EKRMLSNNIARGVRSLQAAGDGKEESEGGFVNPYTAFRKWQMDLIDSKAK
SNDKYPEAYEGLMKEPGMTPAKAERLAKLAVSDPILYSIERRKEANEINK
TKMDYRKIDGFFPMEWILSGDFGWGFNKKRARLAAEKKAAAEEKRNK*