prot_F-serratus_M_contig938.20758.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig938.20758.1
Unique Name	prot_F-serratus_M_contig938.20758.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	290

Homology

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BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot
Match: A0A6H5LDQ8_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDQ8_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 5.550e-108
Identity = 178/273 (65.20%), Postives = 197/273 (72.16%), Query Frame = 0

Query:   42 KPLNKKRVESYNEDLKKRGVVYMSRVPPFMKPAKVKHLMEQHGEVTRVYLVEEDQATRRARKKGGGNSGKRYTEGWVEFDDKKVARAVAESLNNTLIGGRKRNYHHDDIWNIKYLRKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKMEARKRKRNEGE-----------------------------GGNSIPLKATPSDGGDGFGTTSVADSHGRIRRRFKQSSPVADVGGGGSKGLDTDVLRSVFGSNDKRIQ 285
            KPL+ ++++ YNE L KRGVVY+SRVPPFMKPAKVKHLMEQHG VTRVYLVEEDQA RRARKKGGGNSGKRY EGWVEF+DKK+ARA AESLNNTLIGGRKRNY+HDD+WN+KYLRKFKWDHLTEKVAYERRVR QKLRLETMQAKRENARYVELVESGRSFAKME R                                     GG  +P    P+          V DSH RIRRRFKQS+PV DVGG     +D  VLRS+FG +D  ++
Sbjct:   86 KPLSHRKLKDYNEGLAKRGVVYLSRVPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKGGGNSGKRYAEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAGGGEGVPGNPAPA---------GVGDSHRRIRRRFKQSNPVGDVGGXXXXXMDAKVLRSLFGGDDGGVR 349

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BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot
Match: A0A2D4BVT2_PYTIN (Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVT2_PYTIN)

HSP 1 Score: 218 bits (554), Expect = 7.330e-67
Identity = 112/196 (57.14%), Postives = 142/196 (72.45%), Query Frame = 0

Query:   21 NPEIGATQEAATKTAVKRPLMKPLNKKRVESYNEDLKKRGVVYMSRVPPFMKPAKVKHLMEQHGEVTRVYLVEEDQATRRARKKGGGNSGKRYTEGWVEFDDKKVARAVAESLNNTLIGGRKRNYHHDDIWNIKYLRKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKMEARKRKRNEG 216
            NP    T     KT+ KR     L+ K++E Y E   KRGVVY+SRVPPFMKP K+KHL+ Q+G + RVYLV ED+A ++ R   GGN   +YTEGW+EF+DKKVA++VA  LN   IGGRKR+Y+HDD+WN+KYL+ FKWDHLTEK+AYE R+REQKLR+E  QAK+EN  Y+E VE  + F KME RK   ++G
Sbjct:    7 NPVSTETASVQDKTSRKRKKDAVLSTKKLEEYRERAAKRGVVYISRVPPFMKPEKLKHLLGQYGAINRVYLVPEDKAQQKRRVAAGGNRKTKYTEGWIEFEDKKVAKSVAAMLNTKQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIREQKLRMEIAQAKKENDAYLERVEQSKQFQKMEERKSATSKG 202

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BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot
Match: A0A7S2WFD3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFD3_9STRA)

HSP 1 Score: 217 bits (552), Expect = 3.300e-66
Identity = 120/235 (51.06%), Postives = 154/235 (65.53%), Query Frame = 0

Query:   48 RVESYNEDLKKRGVVYMSRVPPFMKPAKVKHLMEQHGEVTRVYLVEEDQATRRARKKGGGNSGKRYTEGWVEFDDKKVARAVAESLNNTLIGGRKRNYHHDDIWNIKYLRKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKMEARKRKRNEGEGGNSIPLKATPSDGGD-GFGTTSVAD--SHGRIRRRFKQSSPVADVGGGGSKGLDTDVLRSVFGS 279
            R + + E L KRGVVYMSRVPP+M+P KVKHL+ Q GE+TR+YLV+ED +  R RKK GGN    Y EGW+EF D+KVA+ VAESLNNT +GG+KR ++ +DIWN+KYLRKF W HLTEK AYERRVRE KLRLE + AK++N  + E+V+  +    +E RK  R            A   D GD    TT +A   S  +IRRRF Q  P+ +   G +  LD+D+L  +  S
Sbjct:   42 RAKRFGEKLAKRGVVYMSRVPPYMRPEKVKHLLGQFGEITRIYLVQEDASVARRRKKLGGNRSPFYVEGWIEFADRKVAKQVAESLNNTKVGGKKRGFYTEDIWNLKYLRKFTWSHLTEKKAYERRVREHKLRLEMVAAKKQNEEFREMVDKNKMIRSIEERKSSRKR------AAENAEGEDAGDLESSTTGMAGLGSMNKIRRRFHQHKPIVEAKRGRAAPLDSDILSKMVSS 270

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BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot
Match: A0A8K1FEZ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEZ1_PYTOL)

HSP 1 Score: 214 bits (546), Expect = 1.140e-65
Identity = 117/240 (48.75%), Postives = 157/240 (65.42%), Query Frame = 0

Query:   44 LNKKRVESYNEDLKKRGVVYMSRVPPFMKPAKVKHLMEQHGEVTRVYLVEEDQATRRARKKGGGNSGKRYTEGWVEFDDKKVARAVAESLNNTLIGGRKRNYHHDDIWNIKYLRKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKMEARKRKRNEGEGGNSIPLKATPSDGGDGFGTTSVADSHGRIRRRFKQSSPVADVGGGGSKGLDTDVLRSVFGSNDKR 283
            L+K +++ Y E + KRGVVY+SRVPP+MKP K+KHL+ ++G++ R+YLV ED+  ++ R   GGN   +YTEGWVEF++KKVA+ VA  LN   IGGRKR+Y+HDDIWN+KYL+ FKW+HLTEK+AYE R+R+QKLR+E  QAK+EN  Y+E VE  + F KME RK                         G  + AD+  +IRR F Q +P A      S G + ++L  VF SN KR
Sbjct:   30 LSKAKLDEYRERVAKRGVVYISRVPPYMKPEKLKHLLSKYGDINRIYLVPEDKVQQKKRVAAGGNRKTKYTEGWVEFENKKVAKTVATMLNTKQIGGRKRDYYHDDIWNLKYLKGFKWEHLTEKIAYENRIRDQKLRMEIAQAKKENDAYLERVEQSKQFTKMEERK------------------------GGKQASADAQ-QIRRTFVQKAP-ASAKDEQSLGGNAELLNKVFASNKKR 243

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BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot
Match: K3WDP5_GLOUD (RRM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDP5_GLOUD)

HSP 1 Score: 214 bits (546), Expect = 1.720e-65
Identity = 116/245 (47.35%), Postives = 156/245 (63.67%), Query Frame = 0

Query:   44 LNKKRVESYNEDLKKRGVVYMSRVPPFMKPAKVKHLMEQHGEVTRVYLVEEDQATRRARKKGGGNSGKRYTEGWVEFDDKKVARAVAESLNNTLIGGRKRNYHHDDIWNIKYLRKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKMEARKRKRNEGEGGNSIPLKATPSDGGDGFGTTSVADSHGRIRRRFKQSSPVADVGGGGSKGLDTDVLRSVFGSNDKRIQSSD 288
            L+++++E + +  +KRGVVY+SRVPPFMKP KVKHL+ Q+G++ R+YLV ED+   + R   GGN  + YTEGW+EF+DKKVA+ VA+ LN   IGGRKR+Y+HDDIWN+KYL+ FKWDHLTEK+AYE R+R+QKLR+E  QAK+EN  Y+E VE  + F KME RK   N G        +                    +IRR F+Q +P +          DT +L  VF S  K+ +  D
Sbjct:   36 LSREKMEQFKKKAEKRGVVYISRVPPFMKPEKVKHLLGQYGDINRIYLVPEDKTHHKKRVAAGGNRKQSYTEGWIEFEDKKVAKQVAKVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLEKVEQSKKFEKMEERKSGANGGANDRDAQYQ--------------------QIRRTFQQKAPTSSKQHSSLGSSDT-LLEKVFASAHKKRKVGD 259

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BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot
Match: H3HB09_PHYRM (RRM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB09_PHYRM)

HSP 1 Score: 213 bits (543), Expect = 3.050e-65
Identity = 102/181 (56.35%), Postives = 143/181 (79.01%), Query Frame = 0

Query:   30 AATKTAVKRPLMKPLNKKRVESYNEDLKKRGVVYMSRVPPFMKPAKVKHLMEQHGEVTRVYLVEEDQATRRARKKGGGNSGKRYTEGWVEFDDKKVARAVAESLNNTLIGGRKRNYHHDDIWNIKYLRKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKMEARK 210
            A  K A  +PL   L+++++E + E  ++RGVVY++RVPPFMKP K++HL+ ++GE+ R+YLV ED++  + R   GGN  ++YTEGW+EF+DKKVA+ VA+ LN TLIGGRKR+Y+HDD+WN+KYL+ FKWDHLTEK+AYE R+R+QKLR+E  QAK+EN  Y+E V+  + F KM+ARK
Sbjct:    8 ATPKAAAAKPLA-GLSREKMEQFKEMAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKSLHKKRVSAGGNRRQKYTEGWLEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMDARK 187

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BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot
Match: D0MVG4_PHYIT (Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVG4_PHYIT)

HSP 1 Score: 213 bits (542), Expect = 4.050e-65
Identity = 110/230 (47.83%), Postives = 156/230 (67.83%), Query Frame = 0

Query:   29 EAATKTAVKRPLMKPLNKKRVESYNEDLKKRGVVYMSRVPPFMKPAKVKHLMEQHGEVTRVYLVEEDQATRRARKKGGGNSGKRYTEGWVEFDDKKVARAVAESLNNTLIGGRKRNYHHDDIWNIKYLRKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKMEARKRKRNEGEGGNSIPLKATPSDGGDGFGTTSVADSHGRIRRRFKQSSPVA 258
            +AA   A     +  L+++++E + E  ++RGVVY++RVPPFMKP K++HL+ ++GE+ R+YLV ED+A  + R   GGN  ++YTEGW+EF++KKVA+ VA+ LN T IGGRKR+Y+HDD+WN+KYL+ FKWDHLTEK+AYE R+R+QKLR+E  QAK+EN  Y+E VE  + F KMEARK  + +                 DG    +  D+   IRR F Q +P +
Sbjct:    6 DAAKPNAATVKALADLSREKMEQFKEKAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFENKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEARKADKKQ-----------------DGH---AAKDAMQHIRRTFHQKAPAS 215

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BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot
Match: A0A5D6Y296_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y296_9STRA)

HSP 1 Score: 212 bits (540), Expect = 7.150e-65
Identity = 109/215 (50.70%), Postives = 144/215 (66.98%), Query Frame = 0

Query:   44 LNKKRVESYNEDLKKRGVVYMSRVPPFMKPAKVKHLMEQHGEVTRVYLVEEDQATRRARKKGGGNSGKRYTEGWVEFDDKKVARAVAESLNNTLIGGRKRNYHHDDIWNIKYLRKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKMEARKRKRNEGEGGNSIPLKATPSDGGDGFGTTSVADSHGRIRRRFKQSSPVA 258
            L+++++E++ +   KRGVVY+SRVPPFMKP KVKHL+ Q G++ R+YLV ED+   + R   GGN  + YTEGW+EF+DKKVAR VA  LN   IGGRKR+Y+HDDIWN+KYL+ FKWDHLTEK+AYE R+R+QKLRLE  QAK+EN  Y++ VE  + F KME RK                         G+ +  + H +IRR F Q +P +
Sbjct:   22 LSREKLEAFKKRADKRGVVYLSRVPPFMKPEKVKHLLGQFGDINRIYLVPEDKTNHKKRVAAGGNRKQSYTEGWIEFEDKKVARQVAAVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRLEIAQAKKENEAYLDKVEQSKQFEKMEERK------------------------HGSGARDEQHQQIRRSFTQKAPTS 212

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BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot
Match: A0A3R7J166_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J166_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.480e-64
Identity = 106/229 (46.29%), Postives = 157/229 (68.56%), Query Frame = 0

Query:   30 AATKTAVKRPLMKPLNKKRVESYNEDLKKRGVVYMSRVPPFMKPAKVKHLMEQHGEVTRVYLVEEDQATRRARKKGGGNSGKRYTEGWVEFDDKKVARAVAESLNNTLIGGRKRNYHHDDIWNIKYLRKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKMEARKRKRNEGEGGNSIPLKATPSDGGDGFGTTSVADSHGRIRRRFKQSSPVA 258
            +++K A  +PL + L+++++E + +  +KRGVVY++RVPPFMKP K++HL+ ++GE+ R+YLV ED+   + R   GGN    YTEGW+EF+DKK+A+ VA+ LN T IGGRKR+Y+HDD+WN KYL+ FKWDHLTEK+AYE R+R+QKLR+E  Q+K+EN  Y+E V+  + F KMEARK  + + +                    +S  D+  ++RR F Q +P +
Sbjct:    7 SSSKPATHKPL-EGLSREKMEQFKQKAEKRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRTNYTEGWIEFEDKKIAKRVAKMLNTTQIGGRKRDYYHDDMWNFKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQSKKENEAYLERVDQSKQFEKMEARKADKKQEK--------------------SSAGDTMQQMRRTFHQKTPTS 214

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BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot
Match: A0A7S1TZ85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ85_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.370e-64
Identity = 101/170 (59.41%), Postives = 134/170 (78.82%), Query Frame = 0

Query:   42 KPLNKKRVESYNEDLKKRGVVYMSRVPPFMKPAKVKHLMEQHGEVTRVYLVEEDQATRRARKKGGGNSGKRYTEGWVEFDDKKVARAVAESLNNTLIGGRKRNYHHDDIWNIKYLRKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKMEARKR 211
            K L+   +  YN  + +RGV+Y+SR+PPFMKP KV+HL+  HGEVTRV+L  ED++ R+AR++ GG+  KRY EGWVEF +KKVA+ VA SLNNT IGG +R+Y+H+DIWNIKYL+ FKWDHLTEK+AYERRVRE ++R E +QA+RENA  ++L + G++   ME RKR
Sbjct:   35 KTLDAAALAEYNAKMARRGVLYLSRIPPFMKPQKVRHLLAVHGEVTRVFLAAEDRSNRKARRRSGGSKAKRYDEGWVEFAEKKVAKRVALSLNNTKIGGSRRSYYHEDIWNIKYLKGFKWDHLTEKLAYERRVREHRMRAEMLQARRENAMLLDLADQGKALRAMEGRKR 204

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig938.20758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LDQ8_9PHAE	5.550e-108	65.20	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A2D4BVT2_PYTIN	7.330e-67	57.14	Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium i...	[more]
A0A7S2WFD3_9STRA	3.300e-66	51.06	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A8K1FEZ1_PYTOL	1.140e-65	48.75	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3WDP5_GLOUD	1.720e-65	47.35	RRM domain-containing protein n=1 Tax=Globisporang...	[more]
H3HB09_PHYRM	3.050e-65	56.35	RRM domain-containing protein n=1 Tax=Phytophthora...	[more]
D0MVG4_PHYIT	4.050e-65	47.83	Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophth...	[more]
A0A5D6Y296_9STRA	7.150e-65	50.70	RRM domain-containing protein n=1 Tax=Pythium bras...	[more]
A0A3R7J166_9STRA	1.480e-64	46.29	RRM domain-containing protein n=2 Tax=Phytophthora...	[more]
A0A7S1TZ85_9STRA	2.370e-64	59.41	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 167..187
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 61..146 e-value: 0.0032 score: 26.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 60..142 score: 9.388
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 17..148 e-value: 1.6E-9 score: 39.8
IPR039119	ABT1/Esf2	PANTHER	PTHR12311	FAMILY NOT NAMED	coord: 14..259
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 50..142

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig938	contig	F-serratus_M_contig938:220082..236951 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig938.20758.1	mRNA_F-serratus_M_contig938.20758.1	Fucus serratus male	mRNA	F-serratus_M_contig938 219619..237063 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig938.20758.1 ID=prot_F-serratus_M_contig938.20758.1|Name=mRNA_F-serratus_M_contig938.20758.1|organism=Fucus serratus male|type=polypeptide|length=290bp
MGNPRAASAARGSENRHTNENPEIGATQEAATKTAVKRPLMKPLNKKRVE
SYNEDLKKRGVVYMSRVPPFMKPAKVKHLMEQHGEVTRVYLVEEDQATRR
ARKKGGGNSGKRYTEGWVEFDDKKVARAVAESLNNTLIGGRKRNYHHDDI
WNIKYLRKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESG
RSFAKMEARKRKRNEGEGGNSIPLKATPSDGGDGFGTTSVADSHGRIRRR
FKQSSPVADVGGGGSKGLDTDVLRSVFGSNDKRIQSSDS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR039119	ABT1/Esf2
IPR035979	RBD_domain_sf