prot_F-serratus_M_contig938.20748.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig938.20748.1
Unique Nameprot_F-serratus_M_contig938.20748.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length568
Homology
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BLAST of mRNA_F-serratus_M_contig938.20748.1 vs. uniprot
Match: D7FRN3_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRN3_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 8.580e-70
Identity = 152/350 (43.43%), Postives = 197/350 (56.29%), Query Frame = 0 
Query:  138 VVQLSNMATFGELIIRARSQGYGAIQQEGPVYGNPGELQTILRDAWVRNGCEVDGTLHIGLAVVVWIPGWFERPLSLVMGPDDAIKDLKRKITSNLGAHPSRQSLSIKGETRRLEDGVSLKECCNAGGEVRPHA--GWSELHLELVVKDSLLSQNGLLTVNVNVAT---------SIGTNEPLKVPRRLYSSNEKAWISSTTLPHWRGRGSYSPPPLYVFAPPSPGAFSTKALAQVGGTFANNKIKRRQKKGNSNGKWPVEFFALSPSGRAITLALPEGASVRDAKGQVENHEGVSPCYQRLLWRGNPLEPDNASLHELGVRGGDTLILGYRTARSLP-EASTPVVHLKG 475
            +V+L N ATFGEL+ RAR + +GA++ EGPVYG  GEL T LRD WVRN C+VDGTLHIGLAVVV  P   +R LSL MGP   I D+K++I  + G  PSRQ L I G  +RL   V+LKECC  G  V   +  GW EL LEL V +   ++N L     + +          ++G   P +    L S ++ + ++             SPP    + P +    S    + +    A+  ++ R    + +G +    FALSPSGRA+TL +   A+V DAK QV   EGVSPC QRLLWRG  +EPD A L  LG RGGDTLI+GYR     P E   PVV L+G
Sbjct:    1 MVRLPNTATFGELLARAREKRHGALELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVVSFPRGSQRSLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMICGGAQRLGANVTLKECCVWGVPVGGFSPKGWGELRLELHVAECT-TRNSLQVAMRDSSQGWSASEFRGAVGVGLPSRGTDVLRSPSQPSHLTP------------SPPVAATYVPQNNEGSSLTTPSSLHRNGAST-VETRPTVEHGSGPYSTVMFALSPSGRALTLTMAPTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLRRLGARGGDTLIVGYRVGPGAPPEVMRPVVELEG 336
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig938.20748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRN3_ECTSI8.580e-7043.43Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 386..458
e-value: 0.0057
score: 25.9
coord: 198..281
e-value: 12.0
score: 4.0
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 394..455
e-value: 7.2E-8
score: 32.1
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 198..260
score: 8.764
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 386..462
score: 12.683
NoneNo IPR availableGENE3D3.10.20.90coord: 389..461
e-value: 9.6E-10
score: 40.2
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 387..459
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 201..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig938contigF-serratus_M_contig938:95493..98547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig938.20748.1mRNA_F-serratus_M_contig938.20748.1Fucus serratus malemRNAF-serratus_M_contig938 95438..98928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig938.20748.1 ID=prot_F-serratus_M_contig938.20748.1|Name=mRNA_F-serratus_M_contig938.20748.1|organism=Fucus serratus male|type=polypeptide|length=568bp
MEHKDEGYVVICTLHPKPLPSVHLNKRFTRIDYTAMCTMKDILEGMAGVL
KMSSADLAVETEGGKGVMLDQCLVDFYAQHLKKRSHRIEGKRHRWPPFLK
TQRKEIHLKVRHTASRNRFVTCIVVGGGDGRHVPHRTVVQLSNMATFGEL
IIRARSQGYGAIQQEGPVYGNPGELQTILRDAWVRNGCEVDGTLHIGLAV
VVWIPGWFERPLSLVMGPDDAIKDLKRKITSNLGAHPSRQSLSIKGETRR
LEDGVSLKECCNAGGEVRPHAGWSELHLELVVKDSLLSQNGLLTVNVNVA
TSIGTNEPLKVPRRLYSSNEKAWISSTTLPHWRGRGSYSPPPLYVFAPPS
PGAFSTKALAQVGGTFANNKIKRRQKKGNSNGKWPVEFFALSPSGRAITL
ALPEGASVRDAKGQVENHEGVSPCYQRLLWRGNPLEPDNASLHELGVRGG
DTLILGYRTARSLPEASTPVVHLKGFPGYSPVSAIQTGRGIHPSDGALTP
IYITGNLSPYDEEGKLGWSPHAGFPAGVDTRNSLVEPEHGSTWRGSGRGP
TNTTAGNYKRTGGREGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf